Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.096 52.056 6.602 1.00 33.97 O
ATOM 2 P G A 42 0.385 52.005 6.014 1.00 34.34 P
ATOM 3 OP1 G A 42 1.004 53.334 6.224 1.00 35.27 O
ATOM 4 OP2 G A 42 0.296 51.432 4.649 1.00 34.74 O
ATOM 5 O5' G A 42 1.109 50.946 6.957 1.00 34.82 O
ATOM 6 C5' G A 42 1.328 51.206 8.343 1.00 36.13 C
ATOM 7 C4' G A 42 1.498 49.889 9.081 1.00 36.74 C
ATOM 8 O4' G A 42 0.342 49.052 8.808 1.00 37.11 O
ATOM 9 C3' G A 42 2.719 49.066 8.679 1.00 37.33 C
ATOM 10 O3' G A 42 3.238 48.357 9.796 1.00 38.27 O
ATOM 11 C2' G A 42 2.156 48.110 7.632 1.00 37.17 C
ATOM 12 O2' G A 42 2.833 46.871 7.563 1.00 37.77 O
ATOM 13 C1' G A 42 0.729 47.883 8.116 1.00 36.89 C
ATOM 14 N9 G A 42 -0.138 47.654 6.970 1.00 36.67 N
ATOM 15 C8 G A 42 -0.904 48.568 6.295 1.00 36.49 C
ATOM 16 N7 G A 42 -1.551 48.057 5.284 1.00 36.81 N
ATOM 17 C5 G A 42 -1.181 46.719 5.286 1.00 36.68 C
ATOM 18 C6 G A 42 -1.562 45.661 4.423 1.00 36.55 C
ATOM 19 O6 G A 42 -2.331 45.708 3.453 1.00 36.63 O
ATOM 20 N1 G A 42 -0.955 44.456 4.779 1.00 36.19 N
ATOM 21 C2 G A 42 -0.087 44.296 5.839 1.00 36.09 C
ATOM 22 N2 G A 42 0.408 43.067 6.039 1.00 35.85 N
ATOM 23 N3 G A 42 0.276 45.279 6.648 1.00 36.30 N
ATOM 24 C4 G A 42 -0.309 46.457 6.317 1.00 36.60 C
ATOM 25 P G A 43 4.813 48.161 9.982 1.00 39.28 P
ATOM 26 OP1 G A 43 4.987 47.028 10.917 1.00 39.09 O
ATOM 27 OP2 G A 43 5.401 49.489 10.274 1.00 39.86 O
ATOM 28 O5' G A 43 5.340 47.705 8.540 1.00 40.25 O
TER
ATOM 1 O3' C B 40 -3.256 55.561 1.768 1.00 38.55 O
ATOM 2 P A B 41 -3.333 54.140 2.492 1.00 37.70 P
ATOM 3 OP1 A B 41 -2.038 53.441 2.323 1.00 37.76 O
ATOM 4 OP2 A B 41 -4.594 53.486 2.058 1.00 37.59 O
ATOM 5 O5' A B 41 -3.490 54.582 4.020 1.00 36.55 O
ATOM 6 C5' A B 41 -2.347 54.932 4.791 1.00 34.55 C
ATOM 7 C4' A B 41 -2.319 54.072 6.038 1.00 33.26 C
ATOM 8 O4' A B 41 -3.578 54.214 6.741 1.00 32.08 O
ATOM 9 C3' A B 41 -2.144 52.573 5.783 1.00 32.98 C
ATOM 10 O3' A B 41 -1.096 52.056 6.602 1.00 33.97 O
ATOM 11 C2' A B 41 -3.497 51.970 6.151 1.00 31.93 C
ATOM 12 O2' A B 41 -3.392 50.668 6.690 1.00 31.44 O
ATOM 13 C1' A B 41 -3.958 52.946 7.226 1.00 30.82 C
ATOM 14 N9 A B 41 -5.397 52.928 7.475 1.00 29.69 N
ATOM 15 C8 A B 41 -6.407 52.949 6.550 1.00 29.12 C
ATOM 16 N7 A B 41 -7.605 52.921 7.079 1.00 28.98 N
ATOM 17 C5 A B 41 -7.360 52.878 8.444 1.00 28.71 C
ATOM 18 C6 A B 41 -8.210 52.835 9.566 1.00 28.25 C
ATOM 19 N6 A B 41 -9.540 52.827 9.469 1.00 29.08 N
ATOM 20 N1 A B 41 -7.648 52.805 10.794 1.00 28.07 N
ATOM 21 C2 A B 41 -6.314 52.816 10.890 1.00 27.93 C
ATOM 22 N3 A B 41 -5.413 52.855 9.909 1.00 28.15 N
ATOM 23 C4 A B 41 -6.005 52.884 8.705 1.00 28.69 C
ATOM 24 P G B 42 0.385 52.005 6.014 1.00 34.34 P
ATOM 25 OP1 G B 42 1.004 53.334 6.224 1.00 35.27 O
ATOM 26 OP2 G B 42 0.296 51.432 4.649 1.00 34.74 O
ATOM 27 O5' G B 42 1.109 50.946 6.957 1.00 34.82 O
TER
ATOM 2 P G A 42 0.385 52.005 6.014 1.00 34.34 P
ATOM 3 OP1 G A 42 1.004 53.334 6.224 1.00 35.27 O
ATOM 4 OP2 G A 42 0.296 51.432 4.649 1.00 34.74 O
ATOM 5 O5' G A 42 1.109 50.946 6.957 1.00 34.82 O
ATOM 6 C5' G A 42 1.328 51.206 8.343 1.00 36.13 C
ATOM 7 C4' G A 42 1.498 49.889 9.081 1.00 36.74 C
ATOM 8 O4' G A 42 0.342 49.052 8.808 1.00 37.11 O
ATOM 9 C3' G A 42 2.719 49.066 8.679 1.00 37.33 C
ATOM 10 O3' G A 42 3.238 48.357 9.796 1.00 38.27 O
ATOM 11 C2' G A 42 2.156 48.110 7.632 1.00 37.17 C
ATOM 12 O2' G A 42 2.833 46.871 7.563 1.00 37.77 O
ATOM 13 C1' G A 42 0.729 47.883 8.116 1.00 36.89 C
ATOM 14 N9 G A 42 -0.138 47.654 6.970 1.00 36.67 N
ATOM 15 C8 G A 42 -0.904 48.568 6.295 1.00 36.49 C
ATOM 16 N7 G A 42 -1.551 48.057 5.284 1.00 36.81 N
ATOM 17 C5 G A 42 -1.181 46.719 5.286 1.00 36.68 C
ATOM 18 C6 G A 42 -1.562 45.661 4.423 1.00 36.55 C
ATOM 19 O6 G A 42 -2.331 45.708 3.453 1.00 36.63 O
ATOM 20 N1 G A 42 -0.955 44.456 4.779 1.00 36.19 N
ATOM 21 C2 G A 42 -0.087 44.296 5.839 1.00 36.09 C
ATOM 22 N2 G A 42 0.408 43.067 6.039 1.00 35.85 N
ATOM 23 N3 G A 42 0.276 45.279 6.648 1.00 36.30 N
ATOM 24 C4 G A 42 -0.309 46.457 6.317 1.00 36.60 C
ATOM 25 P G A 43 4.813 48.161 9.982 1.00 39.28 P
ATOM 26 OP1 G A 43 4.987 47.028 10.917 1.00 39.09 O
ATOM 27 OP2 G A 43 5.401 49.489 10.274 1.00 39.86 O
ATOM 28 O5' G A 43 5.340 47.705 8.540 1.00 40.25 O
TER
ATOM 1 O3' C B 40 -3.256 55.561 1.768 1.00 38.55 O
ATOM 2 P A B 41 -3.333 54.140 2.492 1.00 37.70 P
ATOM 3 OP1 A B 41 -2.038 53.441 2.323 1.00 37.76 O
ATOM 4 OP2 A B 41 -4.594 53.486 2.058 1.00 37.59 O
ATOM 5 O5' A B 41 -3.490 54.582 4.020 1.00 36.55 O
ATOM 6 C5' A B 41 -2.347 54.932 4.791 1.00 34.55 C
ATOM 7 C4' A B 41 -2.319 54.072 6.038 1.00 33.26 C
ATOM 8 O4' A B 41 -3.578 54.214 6.741 1.00 32.08 O
ATOM 9 C3' A B 41 -2.144 52.573 5.783 1.00 32.98 C
ATOM 10 O3' A B 41 -1.096 52.056 6.602 1.00 33.97 O
ATOM 11 C2' A B 41 -3.497 51.970 6.151 1.00 31.93 C
ATOM 12 O2' A B 41 -3.392 50.668 6.690 1.00 31.44 O
ATOM 13 C1' A B 41 -3.958 52.946 7.226 1.00 30.82 C
ATOM 14 N9 A B 41 -5.397 52.928 7.475 1.00 29.69 N
ATOM 15 C8 A B 41 -6.407 52.949 6.550 1.00 29.12 C
ATOM 16 N7 A B 41 -7.605 52.921 7.079 1.00 28.98 N
ATOM 17 C5 A B 41 -7.360 52.878 8.444 1.00 28.71 C
ATOM 18 C6 A B 41 -8.210 52.835 9.566 1.00 28.25 C
ATOM 19 N6 A B 41 -9.540 52.827 9.469 1.00 29.08 N
ATOM 20 N1 A B 41 -7.648 52.805 10.794 1.00 28.07 N
ATOM 21 C2 A B 41 -6.314 52.816 10.890 1.00 27.93 C
ATOM 22 N3 A B 41 -5.413 52.855 9.909 1.00 28.15 N
ATOM 23 C4 A B 41 -6.005 52.884 8.705 1.00 28.69 C
ATOM 24 P G B 42 0.385 52.005 6.014 1.00 34.34 P
ATOM 25 OP1 G B 42 1.004 53.334 6.224 1.00 35.27 O
ATOM 26 OP2 G B 42 0.296 51.432 4.649 1.00 34.74 O
ATOM 27 O5' G B 42 1.109 50.946 6.957 1.00 34.82 O
TER
Atoms:
OP1: (1.004,53.334,6.224)
OP2: (0.296,51.432,4.649)
C3': (2.719,49.066,8.679)
C1': (0.729,47.883,8.116)
C5': (1.328,51.206,8.343)
O6: (-2.331,45.708,3.453)
O4': (0.342,49.052,8.808)
C8: (-0.904,48.568,6.295)
C2: (-0.087,44.296,5.839)
C6: (-1.562,45.661,4.423)
C5: (-1.181,46.719,5.286)
C4: (-0.309,46.457,6.317)
P: (0.385,52.005,6.014)
C4': (1.498,49.889,9.081)
C2': (2.156,48.110,7.632)
O2': (2.833,46.871,7.563)
N1: (-0.955,44.456,4.779)
N2: (0.408,43.067,6.039)
N3: (0.276,45.279,6.648)
N7: (-1.551,48.057,5.284)
N9: (-0.138,47.654,6.970)
O5': (1.109,50.946,6.957)
O3': (3.238,48.357,9.796)
OP2: (0.296,51.432,4.649)
C3': (2.719,49.066,8.679)
C1': (0.729,47.883,8.116)
C5': (1.328,51.206,8.343)
O6: (-2.331,45.708,3.453)
O4': (0.342,49.052,8.808)
C8: (-0.904,48.568,6.295)
C2: (-0.087,44.296,5.839)
C6: (-1.562,45.661,4.423)
C5: (-1.181,46.719,5.286)
C4: (-0.309,46.457,6.317)
P: (0.385,52.005,6.014)
C4': (1.498,49.889,9.081)
C2': (2.156,48.110,7.632)
O2': (2.833,46.871,7.563)
N1: (-0.955,44.456,4.779)
N2: (0.408,43.067,6.039)
N3: (0.276,45.279,6.648)
N7: (-1.551,48.057,5.284)
N9: (-0.138,47.654,6.970)
O5': (1.109,50.946,6.957)
O3': (3.238,48.357,9.796)
OP1: (-2.038,53.441,2.323)
OP2: (-4.594,53.486,2.058)
C3': (-2.144,52.573,5.783)
C1': (-3.958,52.946,7.226)
C5': (-2.347,54.932,4.791)
O4': (-3.578,54.214,6.741)
C8: (-6.407,52.949,6.550)
O2': (-3.392,50.668,6.690)
C6: (-8.210,52.835,9.566)
C5: (-7.360,52.878,8.444)
C4: (-6.005,52.884,8.705)
P: (-3.333,54.140,2.492)
C4': (-2.319,54.072,6.038)
C2': (-3.497,51.970,6.151)
C2: (-6.314,52.816,10.890)
N1: (-7.648,52.805,10.794)
N3: (-5.413,52.855,9.909)
N6: (-9.540,52.827,9.469)
N7: (-7.605,52.921,7.079)
N9: (-5.397,52.928,7.475)
O5': (-3.490,54.582,4.020)
O3': (-1.096,52.056,6.602)
OP2: (-4.594,53.486,2.058)
C3': (-2.144,52.573,5.783)
C1': (-3.958,52.946,7.226)
C5': (-2.347,54.932,4.791)
O4': (-3.578,54.214,6.741)
C8: (-6.407,52.949,6.550)
O2': (-3.392,50.668,6.690)
C6: (-8.210,52.835,9.566)
C5: (-7.360,52.878,8.444)
C4: (-6.005,52.884,8.705)
P: (-3.333,54.140,2.492)
C4': (-2.319,54.072,6.038)
C2': (-3.497,51.970,6.151)
C2: (-6.314,52.816,10.890)
N1: (-7.648,52.805,10.794)
N3: (-5.413,52.855,9.909)
N6: (-9.540,52.827,9.469)
N7: (-7.605,52.921,7.079)
N9: (-5.397,52.928,7.475)
O5': (-3.490,54.582,4.020)
O3': (-1.096,52.056,6.602)
Image (generated by PyMOL):