Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A10:A1373
Extra
PDB:
ATOM 1 O3' U A 9 181.570 111.228 -7.921 1.00 59.33 O
ATOM 2 P G A 10 182.693 111.041 -6.781 1.00 60.65 P
ATOM 3 OP1 G A 10 183.993 110.841 -7.452 1.00 62.07 O
ATOM 4 OP2 G A 10 182.220 110.023 -5.811 1.00 60.87 O
ATOM 5 O5' G A 10 182.788 112.470 -6.079 1.00 61.20 O
ATOM 6 C5' G A 10 183.454 112.624 -4.808 1.00 61.15 C
ATOM 7 C4' G A 10 183.407 114.064 -4.364 1.00 61.35 C
ATOM 8 O4' G A 10 184.230 114.864 -5.244 1.00 62.05 O
ATOM 9 C3' G A 10 182.029 114.699 -4.418 1.00 62.43 C
ATOM 10 O3' G A 10 181.283 114.409 -3.218 1.00 62.35 O
ATOM 11 C2' G A 10 182.353 116.179 -4.623 1.00 62.84 C
ATOM 12 O2' G A 10 182.699 116.842 -3.423 1.00 63.79 O
ATOM 13 C1' G A 10 183.606 116.110 -5.498 1.00 62.61 C
ATOM 14 N9 G A 10 183.353 116.185 -6.937 1.00 63.57 N
ATOM 15 C8 G A 10 183.593 115.184 -7.848 1.00 63.17 C
ATOM 16 N7 G A 10 183.270 115.512 -9.069 1.00 63.60 N
ATOM 17 C5 G A 10 182.786 116.806 -8.968 1.00 62.23 C
ATOM 18 C6 G A 10 182.279 117.666 -9.969 1.00 62.87 C
ATOM 19 O6 G A 10 182.146 117.443 -11.177 1.00 65.24 O
ATOM 20 N1 G A 10 181.894 118.892 -9.444 1.00 63.03 N
ATOM 21 C2 G A 10 181.971 119.243 -8.119 1.00 63.47 C
ATOM 22 N2 G A 10 181.522 120.475 -7.816 1.00 63.81 N
ATOM 23 N3 G A 10 182.444 118.444 -7.164 1.00 63.14 N
ATOM 24 C4 G A 10 182.831 117.246 -7.659 1.00 63.15 C
ATOM 25 P A A 11 179.748 113.924 -3.326 1.00 61.52 P
ATOM 26 OP1 A A 11 179.296 113.519 -1.960 1.00 61.41 O
ATOM 27 OP2 A A 11 179.651 112.917 -4.412 1.00 62.05 O
ATOM 28 O5' A A 11 178.986 115.259 -3.763 1.00 58.56 O
TER
ATOM 1 O3' C B1372 189.279 108.923 -12.128 1.00 60.26 O
ATOM 2 P A B1373 188.390 108.781 -10.803 1.00 62.43 P
ATOM 3 OP1 A B1373 189.161 107.875 -9.888 1.00 62.53 O
ATOM 4 OP2 A B1373 186.966 108.451 -11.168 1.00 63.28 O
ATOM 5 O5' A B1373 188.462 110.219 -10.186 1.00 61.62 O
ATOM 6 C5' A B1373 189.685 110.693 -9.625 1.00 62.68 C
ATOM 7 C4' A B1373 189.420 111.894 -8.771 1.00 63.27 C
ATOM 8 O4' A B1373 188.899 112.958 -9.603 1.00 61.09 O
ATOM 9 C3' A B1373 188.401 111.674 -7.668 1.00 65.38 C
ATOM 10 O3' A B1373 188.822 112.437 -6.555 1.00 69.98 O
ATOM 11 C2' A B1373 187.123 112.258 -8.263 1.00 63.08 C
ATOM 12 O2' A B1373 186.260 112.768 -7.279 1.00 66.40 O
ATOM 13 C1' A B1373 187.678 113.410 -9.084 1.00 59.87 C
ATOM 14 N9 A B1373 186.869 113.873 -10.201 1.00 55.83 N
ATOM 15 C8 A B1373 186.450 113.178 -11.299 1.00 56.50 C
ATOM 16 N7 A B1373 185.819 113.919 -12.184 1.00 54.19 N
ATOM 17 C5 A B1373 185.811 115.178 -11.614 1.00 51.69 C
ATOM 18 C6 A B1373 185.324 116.400 -12.066 1.00 52.79 C
ATOM 19 N6 A B1373 184.744 116.556 -13.254 1.00 54.14 N
ATOM 20 N1 A B1373 185.463 117.476 -11.259 1.00 52.79 N
ATOM 21 C2 A B1373 186.068 117.308 -10.079 1.00 53.69 C
ATOM 22 N3 A B1373 186.585 116.200 -9.547 1.00 53.85 N
ATOM 23 C4 A B1373 186.425 115.160 -10.380 1.00 53.93 C
ATOM 24 P C B1374 188.777 111.802 -5.084 1.00 74.20 P
ATOM 25 OP1 C B1374 187.922 110.583 -5.113 1.00 73.01 O
ATOM 26 OP2 C B1374 188.444 112.929 -4.178 1.00 76.02 O
ATOM 27 O5' C B1374 190.272 111.306 -4.802 1.00 77.50 O
TER
ATOM 2 P G A 10 182.693 111.041 -6.781 1.00 60.65 P
ATOM 3 OP1 G A 10 183.993 110.841 -7.452 1.00 62.07 O
ATOM 4 OP2 G A 10 182.220 110.023 -5.811 1.00 60.87 O
ATOM 5 O5' G A 10 182.788 112.470 -6.079 1.00 61.20 O
ATOM 6 C5' G A 10 183.454 112.624 -4.808 1.00 61.15 C
ATOM 7 C4' G A 10 183.407 114.064 -4.364 1.00 61.35 C
ATOM 8 O4' G A 10 184.230 114.864 -5.244 1.00 62.05 O
ATOM 9 C3' G A 10 182.029 114.699 -4.418 1.00 62.43 C
ATOM 10 O3' G A 10 181.283 114.409 -3.218 1.00 62.35 O
ATOM 11 C2' G A 10 182.353 116.179 -4.623 1.00 62.84 C
ATOM 12 O2' G A 10 182.699 116.842 -3.423 1.00 63.79 O
ATOM 13 C1' G A 10 183.606 116.110 -5.498 1.00 62.61 C
ATOM 14 N9 G A 10 183.353 116.185 -6.937 1.00 63.57 N
ATOM 15 C8 G A 10 183.593 115.184 -7.848 1.00 63.17 C
ATOM 16 N7 G A 10 183.270 115.512 -9.069 1.00 63.60 N
ATOM 17 C5 G A 10 182.786 116.806 -8.968 1.00 62.23 C
ATOM 18 C6 G A 10 182.279 117.666 -9.969 1.00 62.87 C
ATOM 19 O6 G A 10 182.146 117.443 -11.177 1.00 65.24 O
ATOM 20 N1 G A 10 181.894 118.892 -9.444 1.00 63.03 N
ATOM 21 C2 G A 10 181.971 119.243 -8.119 1.00 63.47 C
ATOM 22 N2 G A 10 181.522 120.475 -7.816 1.00 63.81 N
ATOM 23 N3 G A 10 182.444 118.444 -7.164 1.00 63.14 N
ATOM 24 C4 G A 10 182.831 117.246 -7.659 1.00 63.15 C
ATOM 25 P A A 11 179.748 113.924 -3.326 1.00 61.52 P
ATOM 26 OP1 A A 11 179.296 113.519 -1.960 1.00 61.41 O
ATOM 27 OP2 A A 11 179.651 112.917 -4.412 1.00 62.05 O
ATOM 28 O5' A A 11 178.986 115.259 -3.763 1.00 58.56 O
TER
ATOM 1 O3' C B1372 189.279 108.923 -12.128 1.00 60.26 O
ATOM 2 P A B1373 188.390 108.781 -10.803 1.00 62.43 P
ATOM 3 OP1 A B1373 189.161 107.875 -9.888 1.00 62.53 O
ATOM 4 OP2 A B1373 186.966 108.451 -11.168 1.00 63.28 O
ATOM 5 O5' A B1373 188.462 110.219 -10.186 1.00 61.62 O
ATOM 6 C5' A B1373 189.685 110.693 -9.625 1.00 62.68 C
ATOM 7 C4' A B1373 189.420 111.894 -8.771 1.00 63.27 C
ATOM 8 O4' A B1373 188.899 112.958 -9.603 1.00 61.09 O
ATOM 9 C3' A B1373 188.401 111.674 -7.668 1.00 65.38 C
ATOM 10 O3' A B1373 188.822 112.437 -6.555 1.00 69.98 O
ATOM 11 C2' A B1373 187.123 112.258 -8.263 1.00 63.08 C
ATOM 12 O2' A B1373 186.260 112.768 -7.279 1.00 66.40 O
ATOM 13 C1' A B1373 187.678 113.410 -9.084 1.00 59.87 C
ATOM 14 N9 A B1373 186.869 113.873 -10.201 1.00 55.83 N
ATOM 15 C8 A B1373 186.450 113.178 -11.299 1.00 56.50 C
ATOM 16 N7 A B1373 185.819 113.919 -12.184 1.00 54.19 N
ATOM 17 C5 A B1373 185.811 115.178 -11.614 1.00 51.69 C
ATOM 18 C6 A B1373 185.324 116.400 -12.066 1.00 52.79 C
ATOM 19 N6 A B1373 184.744 116.556 -13.254 1.00 54.14 N
ATOM 20 N1 A B1373 185.463 117.476 -11.259 1.00 52.79 N
ATOM 21 C2 A B1373 186.068 117.308 -10.079 1.00 53.69 C
ATOM 22 N3 A B1373 186.585 116.200 -9.547 1.00 53.85 N
ATOM 23 C4 A B1373 186.425 115.160 -10.380 1.00 53.93 C
ATOM 24 P C B1374 188.777 111.802 -5.084 1.00 74.20 P
ATOM 25 OP1 C B1374 187.922 110.583 -5.113 1.00 73.01 O
ATOM 26 OP2 C B1374 188.444 112.929 -4.178 1.00 76.02 O
ATOM 27 O5' C B1374 190.272 111.306 -4.802 1.00 77.50 O
TER
Atoms:
OP1: (183.993,110.841,-7.452)
OP2: (182.220,110.023,-5.811)
C3': (182.029,114.699,-4.418)
C1': (183.606,116.110,-5.498)
C5': (183.454,112.624,-4.808)
O6: (182.146,117.443,-11.177)
O4': (184.230,114.864,-5.244)
C8: (183.593,115.184,-7.848)
C2: (181.971,119.243,-8.119)
C6: (182.279,117.666,-9.969)
C5: (182.786,116.806,-8.968)
C4: (182.831,117.246,-7.659)
P: (182.693,111.041,-6.781)
C4': (183.407,114.064,-4.364)
C2': (182.353,116.179,-4.623)
O2': (182.699,116.842,-3.423)
N1: (181.894,118.892,-9.444)
N2: (181.522,120.475,-7.816)
N3: (182.444,118.444,-7.164)
N7: (183.270,115.512,-9.069)
N9: (183.353,116.185,-6.937)
O5': (182.788,112.470,-6.079)
O3': (181.283,114.409,-3.218)
OP2: (182.220,110.023,-5.811)
C3': (182.029,114.699,-4.418)
C1': (183.606,116.110,-5.498)
C5': (183.454,112.624,-4.808)
O6: (182.146,117.443,-11.177)
O4': (184.230,114.864,-5.244)
C8: (183.593,115.184,-7.848)
C2: (181.971,119.243,-8.119)
C6: (182.279,117.666,-9.969)
C5: (182.786,116.806,-8.968)
C4: (182.831,117.246,-7.659)
P: (182.693,111.041,-6.781)
C4': (183.407,114.064,-4.364)
C2': (182.353,116.179,-4.623)
O2': (182.699,116.842,-3.423)
N1: (181.894,118.892,-9.444)
N2: (181.522,120.475,-7.816)
N3: (182.444,118.444,-7.164)
N7: (183.270,115.512,-9.069)
N9: (183.353,116.185,-6.937)
O5': (182.788,112.470,-6.079)
O3': (181.283,114.409,-3.218)
OP1: (189.161,107.875,-9.888)
OP2: (186.966,108.451,-11.168)
C3': (188.401,111.674,-7.668)
C1': (187.678,113.410,-9.084)
C5': (189.685,110.693,-9.625)
O4': (188.899,112.958,-9.603)
C8: (186.450,113.178,-11.299)
O2': (186.260,112.768,-7.279)
C6: (185.324,116.400,-12.066)
C5: (185.811,115.178,-11.614)
C4: (186.425,115.160,-10.380)
P: (188.390,108.781,-10.803)
C4': (189.420,111.894,-8.771)
C2': (187.123,112.258,-8.263)
C2: (186.068,117.308,-10.079)
N1: (185.463,117.476,-11.259)
N3: (186.585,116.200,-9.547)
N6: (184.744,116.556,-13.254)
N7: (185.819,113.919,-12.184)
N9: (186.869,113.873,-10.201)
O5': (188.462,110.219,-10.186)
O3': (188.822,112.437,-6.555)
OP2: (186.966,108.451,-11.168)
C3': (188.401,111.674,-7.668)
C1': (187.678,113.410,-9.084)
C5': (189.685,110.693,-9.625)
O4': (188.899,112.958,-9.603)
C8: (186.450,113.178,-11.299)
O2': (186.260,112.768,-7.279)
C6: (185.324,116.400,-12.066)
C5: (185.811,115.178,-11.614)
C4: (186.425,115.160,-10.380)
P: (188.390,108.781,-10.803)
C4': (189.420,111.894,-8.771)
C2': (187.123,112.258,-8.263)
C2: (186.068,117.308,-10.079)
N1: (185.463,117.476,-11.259)
N3: (186.585,116.200,-9.547)
N6: (184.744,116.556,-13.254)
N7: (185.819,113.919,-12.184)
N9: (186.869,113.873,-10.201)
O5': (188.462,110.219,-10.186)
O3': (188.822,112.437,-6.555)
Image (generated by PyMOL):