Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:9112:964
Extra
PDB:
ATOM 1 O3' U A 111 49.802 33.880 113.540 1.00 59.74 O
ATOM 2 P C A 112 50.331 32.422 113.943 1.00 59.63 P
ATOM 3 OP1 C A 112 50.390 31.594 112.716 1.00 58.82 O
ATOM 4 OP2 C A 112 49.547 31.955 115.112 1.00 60.11 O
ATOM 5 O5' C A 112 51.825 32.677 114.411 1.00 58.63 O
ATOM 6 C5' C A 112 52.775 33.205 113.492 1.00 59.19 C
ATOM 7 C4' C A 112 54.030 32.384 113.516 1.00 59.52 C
ATOM 8 O4' C A 112 54.886 32.814 114.607 1.00 60.41 O
ATOM 9 C3' C A 112 53.826 30.886 113.682 1.00 59.38 C
ATOM 10 O3' C A 112 54.745 30.199 112.863 1.00 60.43 O
ATOM 11 C2' C A 112 54.187 30.661 115.144 1.00 61.08 C
ATOM 12 O2' C A 112 54.673 29.357 115.385 1.00 62.66 O
ATOM 13 C1' C A 112 55.303 31.684 115.330 1.00 61.96 C
ATOM 14 N1 C A 112 55.628 32.084 116.715 1.00 64.04 N
ATOM 15 C2 C A 112 56.906 32.617 116.971 1.00 64.83 C
ATOM 16 O2 C A 112 57.691 32.786 116.020 1.00 64.92 O
ATOM 17 N3 C A 112 57.251 32.933 118.245 1.00 65.02 N
ATOM 18 C4 C A 112 56.379 32.742 119.241 1.00 65.17 C
ATOM 19 N4 C A 112 56.776 33.038 120.483 1.00 64.05 N
ATOM 20 C5 C A 112 55.062 32.231 119.007 1.00 64.89 C
ATOM 21 C6 C A 112 54.731 31.924 117.741 1.00 64.73 C
ATOM 22 P G A 113 54.211 29.449 111.553 1.00 63.04 P
ATOM 23 OP1 G A 113 53.215 28.431 111.987 1.00 62.47 O
ATOM 24 OP2 G A 113 55.377 29.040 110.722 1.00 62.45 O
ATOM 25 O5' G A 113 53.428 30.591 110.774 1.00 62.06 O
TER
ATOM 1 O3' C B 63 53.327 30.169 124.810 1.00 72.17 O
ATOM 2 P A B 64 52.475 31.516 124.595 1.00 75.55 P
ATOM 3 OP1 A B 64 51.960 31.949 125.922 1.00 74.59 O
ATOM 4 OP2 A B 64 51.519 31.276 123.482 1.00 75.44 O
ATOM 5 O5' A B 64 53.551 32.589 124.109 1.00 76.72 O
ATOM 6 C5' A B 64 54.853 32.684 124.731 1.00 79.38 C
ATOM 7 C4' A B 64 55.518 33.988 124.354 1.00 80.42 C
ATOM 8 O4' A B 64 55.680 34.046 122.919 1.00 81.36 O
ATOM 9 C3' A B 64 54.738 35.233 124.746 1.00 80.64 C
ATOM 10 O3' A B 64 55.077 35.516 126.123 1.00 80.15 O
ATOM 11 C2' A B 64 55.084 36.242 123.647 1.00 81.22 C
ATOM 12 O2' A B 64 56.292 36.941 123.864 1.00 83.76 O
ATOM 13 C1' A B 64 55.310 35.323 122.441 1.00 81.62 C
ATOM 14 N9 A B 64 54.240 35.126 121.465 1.00 81.49 N
ATOM 15 C8 A B 64 52.977 34.625 121.656 1.00 81.43 C
ATOM 16 N7 A B 64 52.306 34.449 120.542 1.00 81.28 N
ATOM 17 C5 A B 64 53.176 34.890 119.554 1.00 81.32 C
ATOM 18 C6 A B 64 53.070 34.948 118.151 1.00 81.19 C
ATOM 19 N6 A B 64 52.010 34.512 117.468 1.00 82.37 N
ATOM 20 N1 A B 64 54.110 35.464 117.463 1.00 80.31 N
ATOM 21 C2 A B 64 55.183 35.873 118.142 1.00 80.27 C
ATOM 22 N3 A B 64 55.411 35.853 119.452 1.00 80.56 N
ATOM 23 C4 A B 64 54.356 35.343 120.110 1.00 81.34 C
ATOM 24 P G B 65 55.536 36.991 126.600 1.00 78.68 P
ATOM 25 OP1 G B 65 55.303 37.032 128.063 1.00 78.91 O
ATOM 26 OP2 G B 65 54.936 38.044 125.741 1.00 80.79 O
ATOM 27 O5' G B 65 57.116 36.999 126.402 1.00 75.82 O
TER
ATOM 2 P C A 112 50.331 32.422 113.943 1.00 59.63 P
ATOM 3 OP1 C A 112 50.390 31.594 112.716 1.00 58.82 O
ATOM 4 OP2 C A 112 49.547 31.955 115.112 1.00 60.11 O
ATOM 5 O5' C A 112 51.825 32.677 114.411 1.00 58.63 O
ATOM 6 C5' C A 112 52.775 33.205 113.492 1.00 59.19 C
ATOM 7 C4' C A 112 54.030 32.384 113.516 1.00 59.52 C
ATOM 8 O4' C A 112 54.886 32.814 114.607 1.00 60.41 O
ATOM 9 C3' C A 112 53.826 30.886 113.682 1.00 59.38 C
ATOM 10 O3' C A 112 54.745 30.199 112.863 1.00 60.43 O
ATOM 11 C2' C A 112 54.187 30.661 115.144 1.00 61.08 C
ATOM 12 O2' C A 112 54.673 29.357 115.385 1.00 62.66 O
ATOM 13 C1' C A 112 55.303 31.684 115.330 1.00 61.96 C
ATOM 14 N1 C A 112 55.628 32.084 116.715 1.00 64.04 N
ATOM 15 C2 C A 112 56.906 32.617 116.971 1.00 64.83 C
ATOM 16 O2 C A 112 57.691 32.786 116.020 1.00 64.92 O
ATOM 17 N3 C A 112 57.251 32.933 118.245 1.00 65.02 N
ATOM 18 C4 C A 112 56.379 32.742 119.241 1.00 65.17 C
ATOM 19 N4 C A 112 56.776 33.038 120.483 1.00 64.05 N
ATOM 20 C5 C A 112 55.062 32.231 119.007 1.00 64.89 C
ATOM 21 C6 C A 112 54.731 31.924 117.741 1.00 64.73 C
ATOM 22 P G A 113 54.211 29.449 111.553 1.00 63.04 P
ATOM 23 OP1 G A 113 53.215 28.431 111.987 1.00 62.47 O
ATOM 24 OP2 G A 113 55.377 29.040 110.722 1.00 62.45 O
ATOM 25 O5' G A 113 53.428 30.591 110.774 1.00 62.06 O
TER
ATOM 1 O3' C B 63 53.327 30.169 124.810 1.00 72.17 O
ATOM 2 P A B 64 52.475 31.516 124.595 1.00 75.55 P
ATOM 3 OP1 A B 64 51.960 31.949 125.922 1.00 74.59 O
ATOM 4 OP2 A B 64 51.519 31.276 123.482 1.00 75.44 O
ATOM 5 O5' A B 64 53.551 32.589 124.109 1.00 76.72 O
ATOM 6 C5' A B 64 54.853 32.684 124.731 1.00 79.38 C
ATOM 7 C4' A B 64 55.518 33.988 124.354 1.00 80.42 C
ATOM 8 O4' A B 64 55.680 34.046 122.919 1.00 81.36 O
ATOM 9 C3' A B 64 54.738 35.233 124.746 1.00 80.64 C
ATOM 10 O3' A B 64 55.077 35.516 126.123 1.00 80.15 O
ATOM 11 C2' A B 64 55.084 36.242 123.647 1.00 81.22 C
ATOM 12 O2' A B 64 56.292 36.941 123.864 1.00 83.76 O
ATOM 13 C1' A B 64 55.310 35.323 122.441 1.00 81.62 C
ATOM 14 N9 A B 64 54.240 35.126 121.465 1.00 81.49 N
ATOM 15 C8 A B 64 52.977 34.625 121.656 1.00 81.43 C
ATOM 16 N7 A B 64 52.306 34.449 120.542 1.00 81.28 N
ATOM 17 C5 A B 64 53.176 34.890 119.554 1.00 81.32 C
ATOM 18 C6 A B 64 53.070 34.948 118.151 1.00 81.19 C
ATOM 19 N6 A B 64 52.010 34.512 117.468 1.00 82.37 N
ATOM 20 N1 A B 64 54.110 35.464 117.463 1.00 80.31 N
ATOM 21 C2 A B 64 55.183 35.873 118.142 1.00 80.27 C
ATOM 22 N3 A B 64 55.411 35.853 119.452 1.00 80.56 N
ATOM 23 C4 A B 64 54.356 35.343 120.110 1.00 81.34 C
ATOM 24 P G B 65 55.536 36.991 126.600 1.00 78.68 P
ATOM 25 OP1 G B 65 55.303 37.032 128.063 1.00 78.91 O
ATOM 26 OP2 G B 65 54.936 38.044 125.741 1.00 80.79 O
ATOM 27 O5' G B 65 57.116 36.999 126.402 1.00 75.82 O
TER
Atoms:
C2: (56.906,32.617,116.971)
OP1: (50.390,31.594,112.716)
OP2: (49.547,31.955,115.112)
C4: (56.379,32.742,119.241)
O5': (51.825,32.677,114.411)
C3': (53.826,30.886,113.682)
C1': (55.303,31.684,115.330)
O4': (54.886,32.814,114.607)
C5': (52.775,33.205,113.492)
P: (50.331,32.422,113.943)
O2: (57.691,32.786,116.020)
C4': (54.030,32.384,113.516)
C2': (54.187,30.661,115.144)
O2': (54.673,29.357,115.385)
N1: (55.628,32.084,116.715)
N3: (57.251,32.933,118.245)
N4: (56.776,33.038,120.483)
C6: (54.731,31.924,117.741)
C5: (55.062,32.231,119.007)
O3': (54.745,30.199,112.863)
OP1: (50.390,31.594,112.716)
OP2: (49.547,31.955,115.112)
C4: (56.379,32.742,119.241)
O5': (51.825,32.677,114.411)
C3': (53.826,30.886,113.682)
C1': (55.303,31.684,115.330)
O4': (54.886,32.814,114.607)
C5': (52.775,33.205,113.492)
P: (50.331,32.422,113.943)
O2: (57.691,32.786,116.020)
C4': (54.030,32.384,113.516)
C2': (54.187,30.661,115.144)
O2': (54.673,29.357,115.385)
N1: (55.628,32.084,116.715)
N3: (57.251,32.933,118.245)
N4: (56.776,33.038,120.483)
C6: (54.731,31.924,117.741)
C5: (55.062,32.231,119.007)
O3': (54.745,30.199,112.863)
OP1: (51.960,31.949,125.922)
OP2: (51.519,31.276,123.482)
C3': (54.738,35.233,124.746)
C1': (55.310,35.323,122.441)
C5': (54.853,32.684,124.731)
O4': (55.680,34.046,122.919)
C8: (52.977,34.625,121.656)
O2': (56.292,36.941,123.864)
C6: (53.070,34.948,118.151)
C5: (53.176,34.890,119.554)
C4: (54.356,35.343,120.110)
P: (52.475,31.516,124.595)
C4': (55.518,33.988,124.354)
C2': (55.084,36.242,123.647)
C2: (55.183,35.873,118.142)
N1: (54.110,35.464,117.463)
N3: (55.411,35.853,119.452)
N6: (52.010,34.512,117.468)
N7: (52.306,34.449,120.542)
N9: (54.240,35.126,121.465)
O5': (53.551,32.589,124.109)
O3': (55.077,35.516,126.123)
OP2: (51.519,31.276,123.482)
C3': (54.738,35.233,124.746)
C1': (55.310,35.323,122.441)
C5': (54.853,32.684,124.731)
O4': (55.680,34.046,122.919)
C8: (52.977,34.625,121.656)
O2': (56.292,36.941,123.864)
C6: (53.070,34.948,118.151)
C5: (53.176,34.890,119.554)
C4: (54.356,35.343,120.110)
P: (52.475,31.516,124.595)
C4': (55.518,33.988,124.354)
C2': (55.084,36.242,123.647)
C2: (55.183,35.873,118.142)
N1: (54.110,35.464,117.463)
N3: (55.411,35.853,119.452)
N6: (52.010,34.512,117.468)
N7: (52.306,34.449,120.542)
N9: (54.240,35.126,121.465)
O5': (53.551,32.589,124.109)
O3': (55.077,35.516,126.123)
Image (generated by PyMOL):