Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 2 P G A 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 3 OP1 G A 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 4 OP2 G A 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 5 O5' G A 42 0.600 50.930 6.954 1.00 19.93 O
ATOM 6 C5' G A 42 0.766 51.117 8.363 1.00 18.79 C
ATOM 7 C4' G A 42 0.997 49.780 9.063 1.00 18.43 C
ATOM 8 O4' G A 42 -0.150 48.910 8.858 1.00 17.78 O
ATOM 9 C3' G A 42 2.209 48.975 8.597 1.00 18.38 C
ATOM 10 O3' G A 42 2.766 48.243 9.681 1.00 19.50 O
ATOM 11 C2' G A 42 1.611 48.043 7.543 1.00 17.59 C
ATOM 12 O2' G A 42 2.331 46.837 7.363 1.00 17.08 O
ATOM 13 C1' G A 42 0.219 47.766 8.108 1.00 16.73 C
ATOM 14 N9 G A 42 -0.729 47.568 7.016 1.00 15.76 N
ATOM 15 C8 G A 42 -1.547 48.504 6.431 1.00 15.48 C
ATOM 16 N7 G A 42 -2.270 48.029 5.455 1.00 15.08 N
ATOM 17 C5 G A 42 -1.899 46.693 5.382 1.00 15.17 C
ATOM 18 C6 G A 42 -2.348 45.669 4.512 1.00 14.99 C
ATOM 19 O6 G A 42 -3.187 45.765 3.606 1.00 15.34 O
ATOM 20 N1 G A 42 -1.715 44.449 4.768 1.00 14.70 N
ATOM 21 C2 G A 42 -0.768 44.248 5.751 1.00 14.94 C
ATOM 22 N2 G A 42 -0.264 43.011 5.859 1.00 15.17 N
ATOM 23 N3 G A 42 -0.341 45.202 6.575 1.00 14.81 N
ATOM 24 C4 G A 42 -0.948 46.394 6.334 1.00 15.25 C
ATOM 25 P G A 43 4.350 48.122 9.874 1.00 21.01 P
ATOM 26 OP1 G A 43 4.594 46.920 10.699 1.00 20.30 O
ATOM 27 OP2 G A 43 4.854 49.441 10.324 1.00 21.16 O
ATOM 28 O5' G A 43 4.889 47.823 8.396 1.00 21.21 O
TER
ATOM 1 O3' C B 40 -3.943 55.550 1.670 1.00 25.99 O
ATOM 2 P A B 41 -3.937 54.157 2.456 1.00 24.81 P
ATOM 3 OP1 A B 41 -2.619 53.522 2.222 1.00 25.29 O
ATOM 4 OP2 A B 41 -5.172 53.418 2.103 1.00 24.53 O
ATOM 5 O5' A B 41 -4.057 54.611 3.989 1.00 23.61 O
ATOM 6 C5' A B 41 -2.904 54.954 4.754 1.00 21.58 C
ATOM 7 C4' A B 41 -2.814 54.092 6.002 1.00 20.58 C
ATOM 8 O4' A B 41 -4.029 54.241 6.785 1.00 19.74 O
ATOM 9 C3' A B 41 -2.648 52.593 5.740 1.00 20.06 C
ATOM 10 O3' A B 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 11 C2' A B 41 -4.012 52.015 6.120 1.00 19.46 C
ATOM 12 O2' A B 41 -3.947 50.681 6.587 1.00 19.62 O
ATOM 13 C1' A B 41 -4.423 52.965 7.242 1.00 18.71 C
ATOM 14 N9 A B 41 -5.855 52.956 7.550 1.00 17.92 N
ATOM 15 C8 A B 41 -6.896 53.009 6.663 1.00 17.53 C
ATOM 16 N7 A B 41 -8.081 52.975 7.227 1.00 17.21 N
ATOM 17 C5 A B 41 -7.798 52.891 8.580 1.00 17.24 C
ATOM 18 C6 A B 41 -8.625 52.819 9.723 1.00 16.99 C
ATOM 19 N6 A B 41 -9.960 52.826 9.658 1.00 17.29 N
ATOM 20 N1 A B 41 -8.026 52.744 10.935 1.00 16.82 N
ATOM 21 C2 A B 41 -6.687 52.741 11.000 1.00 16.85 C
ATOM 22 N3 A B 41 -5.808 52.802 9.995 1.00 17.18 N
ATOM 23 C4 A B 41 -6.430 52.878 8.800 1.00 17.32 C
ATOM 24 P G B 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 25 OP1 G B 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 26 OP2 G B 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 27 O5' G B 42 0.600 50.930 6.954 1.00 19.93 O
TER
ATOM 2 P G A 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 3 OP1 G A 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 4 OP2 G A 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 5 O5' G A 42 0.600 50.930 6.954 1.00 19.93 O
ATOM 6 C5' G A 42 0.766 51.117 8.363 1.00 18.79 C
ATOM 7 C4' G A 42 0.997 49.780 9.063 1.00 18.43 C
ATOM 8 O4' G A 42 -0.150 48.910 8.858 1.00 17.78 O
ATOM 9 C3' G A 42 2.209 48.975 8.597 1.00 18.38 C
ATOM 10 O3' G A 42 2.766 48.243 9.681 1.00 19.50 O
ATOM 11 C2' G A 42 1.611 48.043 7.543 1.00 17.59 C
ATOM 12 O2' G A 42 2.331 46.837 7.363 1.00 17.08 O
ATOM 13 C1' G A 42 0.219 47.766 8.108 1.00 16.73 C
ATOM 14 N9 G A 42 -0.729 47.568 7.016 1.00 15.76 N
ATOM 15 C8 G A 42 -1.547 48.504 6.431 1.00 15.48 C
ATOM 16 N7 G A 42 -2.270 48.029 5.455 1.00 15.08 N
ATOM 17 C5 G A 42 -1.899 46.693 5.382 1.00 15.17 C
ATOM 18 C6 G A 42 -2.348 45.669 4.512 1.00 14.99 C
ATOM 19 O6 G A 42 -3.187 45.765 3.606 1.00 15.34 O
ATOM 20 N1 G A 42 -1.715 44.449 4.768 1.00 14.70 N
ATOM 21 C2 G A 42 -0.768 44.248 5.751 1.00 14.94 C
ATOM 22 N2 G A 42 -0.264 43.011 5.859 1.00 15.17 N
ATOM 23 N3 G A 42 -0.341 45.202 6.575 1.00 14.81 N
ATOM 24 C4 G A 42 -0.948 46.394 6.334 1.00 15.25 C
ATOM 25 P G A 43 4.350 48.122 9.874 1.00 21.01 P
ATOM 26 OP1 G A 43 4.594 46.920 10.699 1.00 20.30 O
ATOM 27 OP2 G A 43 4.854 49.441 10.324 1.00 21.16 O
ATOM 28 O5' G A 43 4.889 47.823 8.396 1.00 21.21 O
TER
ATOM 1 O3' C B 40 -3.943 55.550 1.670 1.00 25.99 O
ATOM 2 P A B 41 -3.937 54.157 2.456 1.00 24.81 P
ATOM 3 OP1 A B 41 -2.619 53.522 2.222 1.00 25.29 O
ATOM 4 OP2 A B 41 -5.172 53.418 2.103 1.00 24.53 O
ATOM 5 O5' A B 41 -4.057 54.611 3.989 1.00 23.61 O
ATOM 6 C5' A B 41 -2.904 54.954 4.754 1.00 21.58 C
ATOM 7 C4' A B 41 -2.814 54.092 6.002 1.00 20.58 C
ATOM 8 O4' A B 41 -4.029 54.241 6.785 1.00 19.74 O
ATOM 9 C3' A B 41 -2.648 52.593 5.740 1.00 20.06 C
ATOM 10 O3' A B 41 -1.596 52.058 6.541 1.00 20.28 O
ATOM 11 C2' A B 41 -4.012 52.015 6.120 1.00 19.46 C
ATOM 12 O2' A B 41 -3.947 50.681 6.587 1.00 19.62 O
ATOM 13 C1' A B 41 -4.423 52.965 7.242 1.00 18.71 C
ATOM 14 N9 A B 41 -5.855 52.956 7.550 1.00 17.92 N
ATOM 15 C8 A B 41 -6.896 53.009 6.663 1.00 17.53 C
ATOM 16 N7 A B 41 -8.081 52.975 7.227 1.00 17.21 N
ATOM 17 C5 A B 41 -7.798 52.891 8.580 1.00 17.24 C
ATOM 18 C6 A B 41 -8.625 52.819 9.723 1.00 16.99 C
ATOM 19 N6 A B 41 -9.960 52.826 9.658 1.00 17.29 N
ATOM 20 N1 A B 41 -8.026 52.744 10.935 1.00 16.82 N
ATOM 21 C2 A B 41 -6.687 52.741 11.000 1.00 16.85 C
ATOM 22 N3 A B 41 -5.808 52.802 9.995 1.00 17.18 N
ATOM 23 C4 A B 41 -6.430 52.878 8.800 1.00 17.32 C
ATOM 24 P G B 42 -0.082 52.029 6.016 1.00 20.66 P
ATOM 25 OP1 G B 42 0.522 53.351 6.292 1.00 20.87 O
ATOM 26 OP2 G B 42 -0.075 51.499 4.632 1.00 20.66 O
ATOM 27 O5' G B 42 0.600 50.930 6.954 1.00 19.93 O
TER
Atoms:
OP1: (0.522,53.351,6.292)
OP2: (-0.075,51.499,4.632)
C3': (2.209,48.975,8.597)
C1': (0.219,47.766,8.108)
C5': (0.766,51.117,8.363)
O6: (-3.187,45.765,3.606)
O4': (-0.150,48.910,8.858)
C8: (-1.547,48.504,6.431)
C2: (-0.768,44.248,5.751)
C6: (-2.348,45.669,4.512)
C5: (-1.899,46.693,5.382)
C4: (-0.948,46.394,6.334)
P: (-0.082,52.029,6.016)
C4': (0.997,49.780,9.063)
C2': (1.611,48.043,7.543)
O2': (2.331,46.837,7.363)
N1: (-1.715,44.449,4.768)
N2: (-0.264,43.011,5.859)
N3: (-0.341,45.202,6.575)
N7: (-2.270,48.029,5.455)
N9: (-0.729,47.568,7.016)
O5': (0.600,50.930,6.954)
O3': (2.766,48.243,9.681)
OP2: (-0.075,51.499,4.632)
C3': (2.209,48.975,8.597)
C1': (0.219,47.766,8.108)
C5': (0.766,51.117,8.363)
O6: (-3.187,45.765,3.606)
O4': (-0.150,48.910,8.858)
C8: (-1.547,48.504,6.431)
C2: (-0.768,44.248,5.751)
C6: (-2.348,45.669,4.512)
C5: (-1.899,46.693,5.382)
C4: (-0.948,46.394,6.334)
P: (-0.082,52.029,6.016)
C4': (0.997,49.780,9.063)
C2': (1.611,48.043,7.543)
O2': (2.331,46.837,7.363)
N1: (-1.715,44.449,4.768)
N2: (-0.264,43.011,5.859)
N3: (-0.341,45.202,6.575)
N7: (-2.270,48.029,5.455)
N9: (-0.729,47.568,7.016)
O5': (0.600,50.930,6.954)
O3': (2.766,48.243,9.681)
OP1: (-2.619,53.522,2.222)
OP2: (-5.172,53.418,2.103)
C3': (-2.648,52.593,5.740)
C1': (-4.423,52.965,7.242)
C5': (-2.904,54.954,4.754)
O4': (-4.029,54.241,6.785)
C8: (-6.896,53.009,6.663)
O2': (-3.947,50.681,6.587)
C6: (-8.625,52.819,9.723)
C5: (-7.798,52.891,8.580)
C4: (-6.430,52.878,8.800)
P: (-3.937,54.157,2.456)
C4': (-2.814,54.092,6.002)
C2': (-4.012,52.015,6.120)
C2: (-6.687,52.741,11.000)
N1: (-8.026,52.744,10.935)
N3: (-5.808,52.802,9.995)
N6: (-9.960,52.826,9.658)
N7: (-8.081,52.975,7.227)
N9: (-5.855,52.956,7.550)
O5': (-4.057,54.611,3.989)
O3': (-1.596,52.058,6.541)
OP2: (-5.172,53.418,2.103)
C3': (-2.648,52.593,5.740)
C1': (-4.423,52.965,7.242)
C5': (-2.904,54.954,4.754)
O4': (-4.029,54.241,6.785)
C8: (-6.896,53.009,6.663)
O2': (-3.947,50.681,6.587)
C6: (-8.625,52.819,9.723)
C5: (-7.798,52.891,8.580)
C4: (-6.430,52.878,8.800)
P: (-3.937,54.157,2.456)
C4': (-2.814,54.092,6.002)
C2': (-4.012,52.015,6.120)
C2: (-6.687,52.741,11.000)
N1: (-8.026,52.744,10.935)
N3: (-5.808,52.802,9.995)
N6: (-9.960,52.826,9.658)
N7: (-8.081,52.975,7.227)
N9: (-5.855,52.956,7.550)
O5': (-4.057,54.611,3.989)
O3': (-1.596,52.058,6.541)
Image (generated by PyMOL):