ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A546:A545

Extra

PDB:
ATOM 1 O3' A A 545 181.702-101.238-102.104 1.00 40.84 O
ATOM 2 P G A 546 182.882-100.419-101.350 1.00 54.35 P
ATOM 3 OP1 G A 546 183.916-100.073-102.365 1.00 35.40 O
ATOM 4 OP2 G A 546 183.293-101.239-100.166 1.00 42.01 O
ATOM 5 O5' G A 546 182.123 -99.086-100.865 1.00 43.43 O
ATOM 6 C5' G A 546 181.091 -99.149 -99.886 1.00 33.28 C
ATOM 7 C4' G A 546 179.791 -98.618-100.416 1.00 40.88 C
ATOM 8 O4' G A 546 179.205 -99.574-101.333 1.00 40.02 O
ATOM 9 C3' G A 546 178.714 -98.349 -99.370 1.00 44.61 C
ATOM 10 O3' G A 546 178.837 -97.054 -98.796 1.00 44.22 O
ATOM 11 C2' G A 546 177.411 -98.541-100.136 1.00 41.32 C
ATOM 12 O2' G A 546 177.045 -97.337-100.808 1.00 48.69 O
ATOM 13 C1' G A 546 177.803 -99.596-101.184 1.00 40.74 C
ATOM 14 N9 G A 546 177.420-100.951-100.775 1.00 38.23 N
ATOM 15 C8 G A 546 178.307-101.904-100.367 1.00 44.99 C
ATOM 16 N7 G A 546 177.737-103.039-100.062 1.00 43.80 N
ATOM 17 C5 G A 546 176.404-102.814-100.292 1.00 38.07 C
ATOM 18 C6 G A 546 175.315-103.701-100.137 1.00 44.46 C
ATOM 19 O6 G A 546 175.343-104.892 -99.751 1.00 48.40 O
ATOM 20 N1 G A 546 174.113-103.079-100.482 1.00 46.57 N
ATOM 21 C2 G A 546 174.003-101.780-100.902 1.00 45.36 C
ATOM 22 N2 G A 546 172.763-101.364-101.184 1.00 49.28 N
ATOM 23 N3 G A 546 175.030-100.952-101.051 1.00 51.24 N
ATOM 24 C4 G A 546 176.192-101.536-100.739 1.00 41.72 C
ATOM 25 P U A 547 178.809 -96.879 -97.200 1.00 55.84 P
ATOM 26 OP1 U A 547 179.167 -95.457 -96.907 1.00 44.03 O
ATOM 27 OP2 U A 547 179.658 -97.961 -96.641 1.00 58.28 O
ATOM 28 O5' U A 547 177.263 -97.153 -96.844 1.00 39.03 O
TER

ATOM 1 O3' C B 544 177.566-100.464-106.954 1.00 35.22 O
ATOM 2 P A B 545 176.870-100.095-105.568 1.00 55.86 P
ATOM 3 OP1 A B 545 175.622-100.924-105.456 1.00 41.79 O
ATOM 4 OP2 A B 545 176.762 -98.613-105.540 1.00 48.82 O
ATOM 5 O5' A B 545 177.943-100.576-104.491 1.00 40.18 O
ATOM 6 C5' A B 545 179.320-100.658-104.827 1.00 37.81 C
ATOM 7 C4' A B 545 180.060-101.532-103.861 1.00 36.20 C
ATOM 8 O4' A B 545 180.180-102.869-104.424 1.00 35.91 O
ATOM 9 C3' A B 545 181.482-101.070-103.505 1.00 36.98 C
ATOM 10 O3' A B 545 181.702-101.238-102.104 1.00 40.84 O
ATOM 11 C2' A B 545 182.371-102.045-104.277 1.00 42.40 C
ATOM 12 O2' A B 545 183.628-102.295-103.682 1.00 40.21 O
ATOM 13 C1' A B 545 181.518-103.307-104.295 1.00 41.86 C
ATOM 14 N9 A B 545 181.838-104.209-105.401 1.00 40.14 N
ATOM 15 C8 A B 545 182.107-105.551-105.318 1.00 37.82 C
ATOM 16 N7 A B 545 182.384-106.101-106.465 1.00 32.44 N
ATOM 17 C5 A B 545 182.319-105.046-107.362 1.00 36.41 C
ATOM 18 C6 A B 545 182.527-104.991-108.745 1.00 40.59 C
ATOM 19 N6 A B 545 182.857-106.062-109.462 1.00 37.51 N
ATOM 20 N1 A B 545 182.398-103.793-109.352 1.00 46.33 N
ATOM 21 C2 A B 545 182.076-102.723-108.596 1.00 46.48 C
ATOM 22 N3 A B 545 181.851-102.645-107.281 1.00 42.23 N
ATOM 23 C4 A B 545 181.997-103.862-106.721 1.00 39.43 C
ATOM 24 P G B 546 182.882-100.419-101.350 1.00 54.35 P
ATOM 25 OP1 G B 546 183.916-100.073-102.365 1.00 35.40 O
ATOM 26 OP2 G B 546 183.293-101.239-100.166 1.00 42.01 O
ATOM 27 O5' G B 546 182.123 -99.086-100.865 1.00 43.43 O
TER

Atoms:
OP1: (183.916,-100.073,-102.365)
OP2: (183.293,-101.239,-100.166)
C3': (178.714,-98.349,-99.370)
C1': (177.803,-99.596,-101.184)
C5': (181.091,-99.149,-99.886)
O6: (175.343,-104.892,-99.751)
O4': (179.205,-99.574,-101.333)
C8: (178.307,-101.904,-100.367)
C2: (174.003,-101.780,-100.902)
C6: (175.315,-103.701,-100.137)
C5: (176.404,-102.814,-100.292)
C4: (176.192,-101.536,-100.739)
P: (182.882,-100.419,-101.350)
C4': (179.791,-98.618,-100.416)
C2': (177.411,-98.541,-100.136)
O2': (177.045,-97.337,-100.808)
N1: (174.113,-103.079,-100.482)
N2: (172.763,-101.364,-101.184)
N3: (175.030,-100.952,-101.051)
N7: (177.737,-103.039,-100.062)
N9: (177.420,-100.951,-100.775)
O5': (182.123,-99.086,-100.865)
O3': (178.837,-97.054,-98.796)
OP1: (175.622,-100.924,-105.456)
OP2: (176.762,-98.613,-105.540)
C3': (181.482,-101.070,-103.505)
C1': (181.518,-103.307,-104.295)
C5': (179.320,-100.658,-104.827)
O4': (180.180,-102.869,-104.424)
C8: (182.107,-105.551,-105.318)
O2': (183.628,-102.295,-103.682)
C6: (182.527,-104.991,-108.745)
C5: (182.319,-105.046,-107.362)
C4: (181.997,-103.862,-106.721)
P: (176.870,-100.095,-105.568)
C4': (180.060,-101.532,-103.861)
C2': (182.371,-102.045,-104.277)
C2: (182.076,-102.723,-108.596)
N1: (182.398,-103.793,-109.352)
N3: (181.851,-102.645,-107.281)
N6: (182.857,-106.062,-109.462)
N7: (182.384,-106.101,-106.465)
N9: (181.838,-104.209,-105.401)
O5': (177.943,-100.576,-104.491)
O3': (181.702,-101.238,-102.104)
Image (generated by PyMOL):
PyMOL image
show in jmol