Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:29:21615
Extra
PDB:
ATOM 1 O3' U A 8 -70.045 -6.134 70.120 1.00 73.16 O
ATOM 2 P G A 9 -70.097 -6.919 68.714 1.00 75.60 P
ATOM 3 OP1 G A 9 -69.031 -7.928 68.741 1.00 75.46 O
ATOM 4 OP2 G A 9 -70.108 -5.901 67.622 1.00 75.37 O
ATOM 5 O5' G A 9 -71.499 -7.640 68.744 1.00 76.71 O
ATOM 6 C5' G A 9 -72.293 -7.675 67.573 1.00 77.42 C
ATOM 7 C4' G A 9 -73.594 -8.362 67.819 1.00 78.46 C
ATOM 8 O4' G A 9 -73.385 -9.473 68.714 1.00 78.67 O
ATOM 9 C3' G A 9 -74.655 -7.518 68.482 1.00 78.59 C
ATOM 10 O3' G A 9 -75.377 -6.765 67.538 1.00 78.90 O
ATOM 11 C2' G A 9 -75.512 -8.549 69.199 1.00 79.45 C
ATOM 12 O2' G A 9 -76.453 -9.126 68.303 1.00 80.48 O
ATOM 13 C1' G A 9 -74.482 -9.616 69.567 1.00 79.24 C
ATOM 14 N9 G A 9 -73.999 -9.479 70.938 1.00 78.64 N
ATOM 15 C8 G A 9 -72.701 -9.285 71.267 1.00 77.73 C
ATOM 16 N7 G A 9 -72.523 -9.234 72.553 1.00 77.41 N
ATOM 17 C5 G A 9 -73.785 -9.411 73.081 1.00 78.16 C
ATOM 18 C6 G A 9 -74.213 -9.440 74.415 1.00 78.27 C
ATOM 19 O6 G A 9 -73.545 -9.315 75.440 1.00 77.70 O
ATOM 20 N1 G A 9 -75.578 -9.650 74.498 1.00 79.18 N
ATOM 21 C2 G A 9 -76.439 -9.810 73.442 1.00 79.93 C
ATOM 22 N2 G A 9 -77.752 -10.009 73.720 1.00 80.82 N
ATOM 23 N3 G A 9 -76.027 -9.768 72.193 1.00 79.83 N
ATOM 24 C4 G A 9 -74.706 -9.576 72.094 1.00 78.93 C
ATOM 25 P A A 10 -75.286 -5.166 67.513 1.00 74.90 P
ATOM 26 OP1 A A 10 -75.685 -4.737 66.148 1.00 75.28 O
ATOM 27 OP2 A A 10 -73.942 -4.795 68.023 1.00 73.80 O
ATOM 28 O5' A A 10 -76.408 -4.736 68.537 1.00 75.22 O
TER
ATOM 1 O3' C B1614 -63.711 -12.374 71.189 1.00 70.96 O
ATOM 2 P A B1615 -64.309 -11.281 70.192 1.00 68.62 P
ATOM 3 OP1 A B1615 -63.617 -11.439 68.898 1.00 68.39 O
ATOM 4 OP2 A B1615 -64.247 -9.979 70.883 1.00 68.56 O
ATOM 5 O5' A B1615 -65.813 -11.744 70.049 1.00 69.12 O
ATOM 6 C5' A B1615 -66.125 -13.037 69.535 1.00 69.27 C
ATOM 7 C4' A B1615 -67.594 -13.184 69.236 1.00 69.77 C
ATOM 8 O4' A B1615 -68.307 -13.412 70.481 1.00 70.06 O
ATOM 9 C3' A B1615 -68.245 -11.976 68.582 1.00 69.93 C
ATOM 10 O3' A B1615 -69.263 -12.428 67.683 1.00 70.31 O
ATOM 11 C2' A B1615 -68.875 -11.249 69.785 1.00 70.15 C
ATOM 12 O2' A B1615 -69.952 -10.388 69.473 1.00 70.52 O
ATOM 13 C1' A B1615 -69.313 -12.427 70.651 1.00 70.38 C
ATOM 14 N9 A B1615 -69.427 -12.141 72.097 1.00 70.46 N
ATOM 15 C8 A B1615 -68.383 -11.833 72.912 1.00 70.10 C
ATOM 16 N7 A B1615 -68.712 -11.690 74.173 1.00 70.28 N
ATOM 17 C5 A B1615 -70.072 -11.932 74.238 1.00 70.80 C
ATOM 18 C6 A B1615 -71.004 -11.944 75.323 1.00 71.22 C
ATOM 19 N6 A B1615 -70.723 -11.684 76.608 1.00 71.20 N
ATOM 20 N1 A B1615 -72.277 -12.262 75.057 1.00 71.71 N
ATOM 21 C2 A B1615 -72.556 -12.534 73.788 1.00 71.76 C
ATOM 22 N3 A B1615 -71.773 -12.553 72.697 1.00 71.39 N
ATOM 23 C4 A B1615 -70.510 -12.235 72.966 1.00 70.91 C
ATOM 24 P C B1616 -69.048 -12.357 66.077 1.00 83.93 P
ATOM 25 OP1 C B1616 -68.414 -11.048 65.776 1.00 83.68 O
ATOM 26 OP2 C B1616 -70.351 -12.678 65.449 1.00 84.43 O
ATOM 27 O5' C B1616 -68.033 -13.535 65.806 1.00 83.61 O
TER
ATOM 2 P G A 9 -70.097 -6.919 68.714 1.00 75.60 P
ATOM 3 OP1 G A 9 -69.031 -7.928 68.741 1.00 75.46 O
ATOM 4 OP2 G A 9 -70.108 -5.901 67.622 1.00 75.37 O
ATOM 5 O5' G A 9 -71.499 -7.640 68.744 1.00 76.71 O
ATOM 6 C5' G A 9 -72.293 -7.675 67.573 1.00 77.42 C
ATOM 7 C4' G A 9 -73.594 -8.362 67.819 1.00 78.46 C
ATOM 8 O4' G A 9 -73.385 -9.473 68.714 1.00 78.67 O
ATOM 9 C3' G A 9 -74.655 -7.518 68.482 1.00 78.59 C
ATOM 10 O3' G A 9 -75.377 -6.765 67.538 1.00 78.90 O
ATOM 11 C2' G A 9 -75.512 -8.549 69.199 1.00 79.45 C
ATOM 12 O2' G A 9 -76.453 -9.126 68.303 1.00 80.48 O
ATOM 13 C1' G A 9 -74.482 -9.616 69.567 1.00 79.24 C
ATOM 14 N9 G A 9 -73.999 -9.479 70.938 1.00 78.64 N
ATOM 15 C8 G A 9 -72.701 -9.285 71.267 1.00 77.73 C
ATOM 16 N7 G A 9 -72.523 -9.234 72.553 1.00 77.41 N
ATOM 17 C5 G A 9 -73.785 -9.411 73.081 1.00 78.16 C
ATOM 18 C6 G A 9 -74.213 -9.440 74.415 1.00 78.27 C
ATOM 19 O6 G A 9 -73.545 -9.315 75.440 1.00 77.70 O
ATOM 20 N1 G A 9 -75.578 -9.650 74.498 1.00 79.18 N
ATOM 21 C2 G A 9 -76.439 -9.810 73.442 1.00 79.93 C
ATOM 22 N2 G A 9 -77.752 -10.009 73.720 1.00 80.82 N
ATOM 23 N3 G A 9 -76.027 -9.768 72.193 1.00 79.83 N
ATOM 24 C4 G A 9 -74.706 -9.576 72.094 1.00 78.93 C
ATOM 25 P A A 10 -75.286 -5.166 67.513 1.00 74.90 P
ATOM 26 OP1 A A 10 -75.685 -4.737 66.148 1.00 75.28 O
ATOM 27 OP2 A A 10 -73.942 -4.795 68.023 1.00 73.80 O
ATOM 28 O5' A A 10 -76.408 -4.736 68.537 1.00 75.22 O
TER
ATOM 1 O3' C B1614 -63.711 -12.374 71.189 1.00 70.96 O
ATOM 2 P A B1615 -64.309 -11.281 70.192 1.00 68.62 P
ATOM 3 OP1 A B1615 -63.617 -11.439 68.898 1.00 68.39 O
ATOM 4 OP2 A B1615 -64.247 -9.979 70.883 1.00 68.56 O
ATOM 5 O5' A B1615 -65.813 -11.744 70.049 1.00 69.12 O
ATOM 6 C5' A B1615 -66.125 -13.037 69.535 1.00 69.27 C
ATOM 7 C4' A B1615 -67.594 -13.184 69.236 1.00 69.77 C
ATOM 8 O4' A B1615 -68.307 -13.412 70.481 1.00 70.06 O
ATOM 9 C3' A B1615 -68.245 -11.976 68.582 1.00 69.93 C
ATOM 10 O3' A B1615 -69.263 -12.428 67.683 1.00 70.31 O
ATOM 11 C2' A B1615 -68.875 -11.249 69.785 1.00 70.15 C
ATOM 12 O2' A B1615 -69.952 -10.388 69.473 1.00 70.52 O
ATOM 13 C1' A B1615 -69.313 -12.427 70.651 1.00 70.38 C
ATOM 14 N9 A B1615 -69.427 -12.141 72.097 1.00 70.46 N
ATOM 15 C8 A B1615 -68.383 -11.833 72.912 1.00 70.10 C
ATOM 16 N7 A B1615 -68.712 -11.690 74.173 1.00 70.28 N
ATOM 17 C5 A B1615 -70.072 -11.932 74.238 1.00 70.80 C
ATOM 18 C6 A B1615 -71.004 -11.944 75.323 1.00 71.22 C
ATOM 19 N6 A B1615 -70.723 -11.684 76.608 1.00 71.20 N
ATOM 20 N1 A B1615 -72.277 -12.262 75.057 1.00 71.71 N
ATOM 21 C2 A B1615 -72.556 -12.534 73.788 1.00 71.76 C
ATOM 22 N3 A B1615 -71.773 -12.553 72.697 1.00 71.39 N
ATOM 23 C4 A B1615 -70.510 -12.235 72.966 1.00 70.91 C
ATOM 24 P C B1616 -69.048 -12.357 66.077 1.00 83.93 P
ATOM 25 OP1 C B1616 -68.414 -11.048 65.776 1.00 83.68 O
ATOM 26 OP2 C B1616 -70.351 -12.678 65.449 1.00 84.43 O
ATOM 27 O5' C B1616 -68.033 -13.535 65.806 1.00 83.61 O
TER
Atoms:
OP1: (-69.031,-7.928,68.741)
OP2: (-70.108,-5.901,67.622)
C3': (-74.655,-7.518,68.482)
C1': (-74.482,-9.616,69.567)
C5': (-72.293,-7.675,67.573)
O6: (-73.545,-9.315,75.440)
O4': (-73.385,-9.473,68.714)
C8: (-72.701,-9.285,71.267)
C2: (-76.439,-9.810,73.442)
C6: (-74.213,-9.440,74.415)
C5: (-73.785,-9.411,73.081)
C4: (-74.706,-9.576,72.094)
P: (-70.097,-6.919,68.714)
C4': (-73.594,-8.362,67.819)
C2': (-75.512,-8.549,69.199)
O2': (-76.453,-9.126,68.303)
N1: (-75.578,-9.650,74.498)
N2: (-77.752,-10.009,73.720)
N3: (-76.027,-9.768,72.193)
N7: (-72.523,-9.234,72.553)
N9: (-73.999,-9.479,70.938)
O5': (-71.499,-7.640,68.744)
O3': (-75.377,-6.765,67.538)
OP2: (-70.108,-5.901,67.622)
C3': (-74.655,-7.518,68.482)
C1': (-74.482,-9.616,69.567)
C5': (-72.293,-7.675,67.573)
O6: (-73.545,-9.315,75.440)
O4': (-73.385,-9.473,68.714)
C8: (-72.701,-9.285,71.267)
C2: (-76.439,-9.810,73.442)
C6: (-74.213,-9.440,74.415)
C5: (-73.785,-9.411,73.081)
C4: (-74.706,-9.576,72.094)
P: (-70.097,-6.919,68.714)
C4': (-73.594,-8.362,67.819)
C2': (-75.512,-8.549,69.199)
O2': (-76.453,-9.126,68.303)
N1: (-75.578,-9.650,74.498)
N2: (-77.752,-10.009,73.720)
N3: (-76.027,-9.768,72.193)
N7: (-72.523,-9.234,72.553)
N9: (-73.999,-9.479,70.938)
O5': (-71.499,-7.640,68.744)
O3': (-75.377,-6.765,67.538)
OP1: (-63.617,-11.439,68.898)
OP2: (-64.247,-9.979,70.883)
C3': (-68.245,-11.976,68.582)
C1': (-69.313,-12.427,70.651)
C5': (-66.125,-13.037,69.535)
O4': (-68.307,-13.412,70.481)
C8: (-68.383,-11.833,72.912)
O2': (-69.952,-10.388,69.473)
C6: (-71.004,-11.944,75.323)
C5: (-70.072,-11.932,74.238)
C4: (-70.510,-12.235,72.966)
P: (-64.309,-11.281,70.192)
C4': (-67.594,-13.184,69.236)
C2': (-68.875,-11.249,69.785)
C2: (-72.556,-12.534,73.788)
N1: (-72.277,-12.262,75.057)
N3: (-71.773,-12.553,72.697)
N6: (-70.723,-11.684,76.608)
N7: (-68.712,-11.690,74.173)
N9: (-69.427,-12.141,72.097)
O5': (-65.813,-11.744,70.049)
O3': (-69.263,-12.428,67.683)
OP2: (-64.247,-9.979,70.883)
C3': (-68.245,-11.976,68.582)
C1': (-69.313,-12.427,70.651)
C5': (-66.125,-13.037,69.535)
O4': (-68.307,-13.412,70.481)
C8: (-68.383,-11.833,72.912)
O2': (-69.952,-10.388,69.473)
C6: (-71.004,-11.944,75.323)
C5: (-70.072,-11.932,74.238)
C4: (-70.510,-12.235,72.966)
P: (-64.309,-11.281,70.192)
C4': (-67.594,-13.184,69.236)
C2': (-68.875,-11.249,69.785)
C2: (-72.556,-12.534,73.788)
N1: (-72.277,-12.262,75.057)
N3: (-71.773,-12.553,72.697)
N6: (-70.723,-11.684,76.608)
N7: (-68.712,-11.690,74.173)
N9: (-69.427,-12.141,72.097)
O5': (-65.813,-11.744,70.049)
O3': (-69.263,-12.428,67.683)
Image (generated by PyMOL):