Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:9112:964
Extra
PDB:
ATOM 1 O3' U A 111 49.602 33.868 113.487 1.00 48.89 O
ATOM 2 P C A 112 49.983 32.368 113.881 1.00 49.23 P
ATOM 3 OP1 C A 112 49.916 31.570 112.631 1.00 48.42 O
ATOM 4 OP2 C A 112 49.155 31.981 115.050 1.00 49.64 O
ATOM 5 O5' C A 112 51.502 32.467 114.344 1.00 48.13 O
ATOM 6 C5' C A 112 52.481 33.026 113.464 1.00 49.39 C
ATOM 7 C4' C A 112 53.763 32.237 113.518 1.00 48.46 C
ATOM 8 O4' C A 112 54.582 32.694 114.629 1.00 50.06 O
ATOM 9 C3' C A 112 53.620 30.727 113.672 1.00 48.07 C
ATOM 10 O3' C A 112 54.594 30.077 112.871 1.00 48.84 O
ATOM 11 C2' C A 112 53.971 30.519 115.140 1.00 49.24 C
ATOM 12 O2' C A 112 54.482 29.234 115.421 1.00 50.96 O
ATOM 13 C1' C A 112 55.062 31.569 115.319 1.00 50.21 C
ATOM 14 N1 C A 112 55.415 31.950 116.700 1.00 50.67 N
ATOM 15 C2 C A 112 56.682 32.511 116.936 1.00 51.42 C
ATOM 16 O2 C A 112 57.437 32.733 115.964 1.00 50.66 O
ATOM 17 N3 C A 112 57.048 32.799 118.213 1.00 51.31 N
ATOM 18 C4 C A 112 56.206 32.552 119.223 1.00 50.22 C
ATOM 19 N4 C A 112 56.618 32.814 120.464 1.00 48.48 N
ATOM 20 C5 C A 112 54.905 32.017 119.004 1.00 50.13 C
ATOM 21 C6 C A 112 54.551 31.739 117.741 1.00 50.52 C
ATOM 22 P G A 113 54.129 29.287 111.555 1.00 51.02 P
ATOM 23 OP1 G A 113 53.138 28.262 111.968 1.00 50.43 O
ATOM 24 OP2 G A 113 55.321 28.885 110.768 1.00 49.19 O
ATOM 25 O5' G A 113 53.354 30.402 110.731 1.00 51.99 O
TER
ATOM 1 O3' C B 63 53.086 30.005 124.736 1.00 64.80 O
ATOM 2 P A B 64 52.168 31.311 124.541 1.00 67.84 P
ATOM 3 OP1 A B 64 51.524 31.608 125.850 1.00 67.19 O
ATOM 4 OP2 A B 64 51.319 31.107 123.331 1.00 67.23 O
ATOM 5 O5' A B 64 53.211 32.479 124.240 1.00 69.19 O
ATOM 6 C5' A B 64 54.512 32.508 124.873 1.00 70.19 C
ATOM 7 C4' A B 64 55.278 33.736 124.439 1.00 70.76 C
ATOM 8 O4' A B 64 55.439 33.717 123.000 1.00 71.20 O
ATOM 9 C3' A B 64 54.600 35.056 124.766 1.00 71.33 C
ATOM 10 O3' A B 64 54.934 35.379 126.134 1.00 69.78 O
ATOM 11 C2' A B 64 55.079 35.984 123.649 1.00 72.77 C
ATOM 12 O2' A B 64 56.353 36.546 123.888 1.00 76.49 O
ATOM 13 C1' A B 64 55.221 35.010 122.473 1.00 72.24 C
ATOM 14 N9 A B 64 54.131 34.903 121.503 1.00 72.03 N
ATOM 15 C8 A B 64 52.833 34.510 121.711 1.00 72.32 C
ATOM 16 N7 A B 64 52.138 34.382 120.607 1.00 72.59 N
ATOM 17 C5 A B 64 53.030 34.743 119.606 1.00 72.61 C
ATOM 18 C6 A B 64 52.915 34.792 118.202 1.00 72.69 C
ATOM 19 N6 A B 64 51.819 34.429 117.534 1.00 72.65 N
ATOM 20 N1 A B 64 53.987 35.217 117.499 1.00 72.57 N
ATOM 21 C2 A B 64 55.098 35.550 118.165 1.00 71.60 C
ATOM 22 N3 A B 64 55.335 35.526 119.474 1.00 71.91 N
ATOM 23 C4 A B 64 54.249 35.105 120.147 1.00 72.48 C
ATOM 24 P G B 65 55.347 36.878 126.572 1.00 68.43 P
ATOM 25 OP1 G B 65 55.068 36.967 128.030 1.00 68.52 O
ATOM 26 OP2 G B 65 54.744 37.885 125.653 1.00 68.45 O
ATOM 27 O5' G B 65 56.931 36.897 126.401 1.00 65.53 O
TER
ATOM 2 P C A 112 49.983 32.368 113.881 1.00 49.23 P
ATOM 3 OP1 C A 112 49.916 31.570 112.631 1.00 48.42 O
ATOM 4 OP2 C A 112 49.155 31.981 115.050 1.00 49.64 O
ATOM 5 O5' C A 112 51.502 32.467 114.344 1.00 48.13 O
ATOM 6 C5' C A 112 52.481 33.026 113.464 1.00 49.39 C
ATOM 7 C4' C A 112 53.763 32.237 113.518 1.00 48.46 C
ATOM 8 O4' C A 112 54.582 32.694 114.629 1.00 50.06 O
ATOM 9 C3' C A 112 53.620 30.727 113.672 1.00 48.07 C
ATOM 10 O3' C A 112 54.594 30.077 112.871 1.00 48.84 O
ATOM 11 C2' C A 112 53.971 30.519 115.140 1.00 49.24 C
ATOM 12 O2' C A 112 54.482 29.234 115.421 1.00 50.96 O
ATOM 13 C1' C A 112 55.062 31.569 115.319 1.00 50.21 C
ATOM 14 N1 C A 112 55.415 31.950 116.700 1.00 50.67 N
ATOM 15 C2 C A 112 56.682 32.511 116.936 1.00 51.42 C
ATOM 16 O2 C A 112 57.437 32.733 115.964 1.00 50.66 O
ATOM 17 N3 C A 112 57.048 32.799 118.213 1.00 51.31 N
ATOM 18 C4 C A 112 56.206 32.552 119.223 1.00 50.22 C
ATOM 19 N4 C A 112 56.618 32.814 120.464 1.00 48.48 N
ATOM 20 C5 C A 112 54.905 32.017 119.004 1.00 50.13 C
ATOM 21 C6 C A 112 54.551 31.739 117.741 1.00 50.52 C
ATOM 22 P G A 113 54.129 29.287 111.555 1.00 51.02 P
ATOM 23 OP1 G A 113 53.138 28.262 111.968 1.00 50.43 O
ATOM 24 OP2 G A 113 55.321 28.885 110.768 1.00 49.19 O
ATOM 25 O5' G A 113 53.354 30.402 110.731 1.00 51.99 O
TER
ATOM 1 O3' C B 63 53.086 30.005 124.736 1.00 64.80 O
ATOM 2 P A B 64 52.168 31.311 124.541 1.00 67.84 P
ATOM 3 OP1 A B 64 51.524 31.608 125.850 1.00 67.19 O
ATOM 4 OP2 A B 64 51.319 31.107 123.331 1.00 67.23 O
ATOM 5 O5' A B 64 53.211 32.479 124.240 1.00 69.19 O
ATOM 6 C5' A B 64 54.512 32.508 124.873 1.00 70.19 C
ATOM 7 C4' A B 64 55.278 33.736 124.439 1.00 70.76 C
ATOM 8 O4' A B 64 55.439 33.717 123.000 1.00 71.20 O
ATOM 9 C3' A B 64 54.600 35.056 124.766 1.00 71.33 C
ATOM 10 O3' A B 64 54.934 35.379 126.134 1.00 69.78 O
ATOM 11 C2' A B 64 55.079 35.984 123.649 1.00 72.77 C
ATOM 12 O2' A B 64 56.353 36.546 123.888 1.00 76.49 O
ATOM 13 C1' A B 64 55.221 35.010 122.473 1.00 72.24 C
ATOM 14 N9 A B 64 54.131 34.903 121.503 1.00 72.03 N
ATOM 15 C8 A B 64 52.833 34.510 121.711 1.00 72.32 C
ATOM 16 N7 A B 64 52.138 34.382 120.607 1.00 72.59 N
ATOM 17 C5 A B 64 53.030 34.743 119.606 1.00 72.61 C
ATOM 18 C6 A B 64 52.915 34.792 118.202 1.00 72.69 C
ATOM 19 N6 A B 64 51.819 34.429 117.534 1.00 72.65 N
ATOM 20 N1 A B 64 53.987 35.217 117.499 1.00 72.57 N
ATOM 21 C2 A B 64 55.098 35.550 118.165 1.00 71.60 C
ATOM 22 N3 A B 64 55.335 35.526 119.474 1.00 71.91 N
ATOM 23 C4 A B 64 54.249 35.105 120.147 1.00 72.48 C
ATOM 24 P G B 65 55.347 36.878 126.572 1.00 68.43 P
ATOM 25 OP1 G B 65 55.068 36.967 128.030 1.00 68.52 O
ATOM 26 OP2 G B 65 54.744 37.885 125.653 1.00 68.45 O
ATOM 27 O5' G B 65 56.931 36.897 126.401 1.00 65.53 O
TER
Atoms:
C2: (56.682,32.511,116.936)
OP1: (49.916,31.570,112.631)
OP2: (49.155,31.981,115.050)
C4: (56.206,32.552,119.223)
O5': (51.502,32.467,114.344)
C3': (53.620,30.727,113.672)
C1': (55.062,31.569,115.319)
O4': (54.582,32.694,114.629)
C5': (52.481,33.026,113.464)
P: (49.983,32.368,113.881)
O2: (57.437,32.733,115.964)
C4': (53.763,32.237,113.518)
C2': (53.971,30.519,115.140)
O2': (54.482,29.234,115.421)
N1: (55.415,31.950,116.700)
N3: (57.048,32.799,118.213)
N4: (56.618,32.814,120.464)
C6: (54.551,31.739,117.741)
C5: (54.905,32.017,119.004)
O3': (54.594,30.077,112.871)
OP1: (49.916,31.570,112.631)
OP2: (49.155,31.981,115.050)
C4: (56.206,32.552,119.223)
O5': (51.502,32.467,114.344)
C3': (53.620,30.727,113.672)
C1': (55.062,31.569,115.319)
O4': (54.582,32.694,114.629)
C5': (52.481,33.026,113.464)
P: (49.983,32.368,113.881)
O2: (57.437,32.733,115.964)
C4': (53.763,32.237,113.518)
C2': (53.971,30.519,115.140)
O2': (54.482,29.234,115.421)
N1: (55.415,31.950,116.700)
N3: (57.048,32.799,118.213)
N4: (56.618,32.814,120.464)
C6: (54.551,31.739,117.741)
C5: (54.905,32.017,119.004)
O3': (54.594,30.077,112.871)
OP1: (51.524,31.608,125.850)
OP2: (51.319,31.107,123.331)
C3': (54.600,35.056,124.766)
C1': (55.221,35.010,122.473)
C5': (54.512,32.508,124.873)
O4': (55.439,33.717,123.000)
C8: (52.833,34.510,121.711)
O2': (56.353,36.546,123.888)
C6: (52.915,34.792,118.202)
C5: (53.030,34.743,119.606)
C4: (54.249,35.105,120.147)
P: (52.168,31.311,124.541)
C4': (55.278,33.736,124.439)
C2': (55.079,35.984,123.649)
C2: (55.098,35.550,118.165)
N1: (53.987,35.217,117.499)
N3: (55.335,35.526,119.474)
N6: (51.819,34.429,117.534)
N7: (52.138,34.382,120.607)
N9: (54.131,34.903,121.503)
O5': (53.211,32.479,124.240)
O3': (54.934,35.379,126.134)
OP2: (51.319,31.107,123.331)
C3': (54.600,35.056,124.766)
C1': (55.221,35.010,122.473)
C5': (54.512,32.508,124.873)
O4': (55.439,33.717,123.000)
C8: (52.833,34.510,121.711)
O2': (56.353,36.546,123.888)
C6: (52.915,34.792,118.202)
C5: (53.030,34.743,119.606)
C4: (54.249,35.105,120.147)
P: (52.168,31.311,124.541)
C4': (55.278,33.736,124.439)
C2': (55.079,35.984,123.649)
C2: (55.098,35.550,118.165)
N1: (53.987,35.217,117.499)
N3: (55.335,35.526,119.474)
N6: (51.819,34.429,117.534)
N7: (52.138,34.382,120.607)
N9: (54.131,34.903,121.503)
O5': (53.211,32.479,124.240)
O3': (54.934,35.379,126.134)
Image (generated by PyMOL):