Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A10:A1367
Extra
PDB:
ATOM 1 O3' U A 9 180.734 110.801 -8.245 1.00 42.15 O
ATOM 2 P G A 10 181.810 110.589 -7.067 1.00 45.22 P
ATOM 3 OP1 G A 10 183.126 110.376 -7.694 1.00 39.76 O
ATOM 4 OP2 G A 10 181.289 109.571 -6.120 1.00 39.76 O
ATOM 5 O5' G A 10 181.879 112.015 -6.360 1.00 45.22 O
ATOM 6 C5' G A 10 182.612 112.199 -5.134 1.00 45.22 C
ATOM 7 C4' G A 10 182.585 113.652 -4.725 1.00 45.22 C
ATOM 8 O4' G A 10 183.393 114.437 -5.634 1.00 45.22 O
ATOM 9 C3' G A 10 181.215 114.296 -4.772 1.00 45.22 C
ATOM 10 O3' G A 10 180.493 114.022 -3.575 1.00 45.22 O
ATOM 11 C2' G A 10 181.553 115.768 -4.979 1.00 45.22 C
ATOM 12 O2' G A 10 181.991 116.368 -3.777 1.00 45.22 O
ATOM 13 C1' G A 10 182.762 115.679 -5.905 1.00 45.22 C
ATOM 14 N9 G A 10 182.434 115.682 -7.328 1.00 39.76 N
ATOM 15 C8 G A 10 182.629 114.627 -8.182 1.00 39.76 C
ATOM 16 N7 G A 10 182.258 114.877 -9.403 1.00 39.76 N
ATOM 17 C5 G A 10 181.783 116.174 -9.360 1.00 39.76 C
ATOM 18 C6 G A 10 181.236 116.951 -10.384 1.00 39.76 C
ATOM 19 O6 G A 10 181.035 116.629 -11.569 1.00 39.76 O
ATOM 20 N1 G A 10 180.886 118.214 -9.936 1.00 39.76 N
ATOM 21 C2 G A 10 181.025 118.658 -8.647 1.00 39.76 C
ATOM 22 N2 G A 10 180.617 119.931 -8.423 1.00 39.76 N
ATOM 23 N3 G A 10 181.523 117.918 -7.657 1.00 39.76 N
ATOM 24 C4 G A 10 181.885 116.695 -8.089 1.00 39.76 C
ATOM 25 P A A 11 178.980 113.460 -3.670 1.00 45.15 P
ATOM 26 OP1 A A 11 178.557 113.145 -2.274 1.00 34.77 O
ATOM 27 OP2 A A 11 178.904 112.387 -4.715 1.00 34.77 O
ATOM 28 O5' A A 11 178.153 114.730 -4.161 1.00 45.15 O
TER
ATOM 1 O3' C B1366 188.329 108.625 -12.274 1.00 41.59 O
ATOM 2 P A B1367 187.426 108.520 -10.963 1.00 52.42 P
ATOM 3 OP1 A B1367 188.100 107.591 -10.023 1.00 33.45 O
ATOM 4 OP2 A B1367 186.035 108.232 -11.398 1.00 33.45 O
ATOM 5 O5' A B1367 187.477 110.002 -10.375 1.00 52.42 O
ATOM 6 C5' A B1367 188.679 110.514 -9.774 1.00 52.42 C
ATOM 7 C4' A B1367 188.355 111.671 -8.870 1.00 52.42 C
ATOM 8 O4' A B1367 187.868 112.775 -9.675 1.00 52.42 O
ATOM 9 C3' A B1367 187.287 111.389 -7.826 1.00 52.42 C
ATOM 10 O3' A B1367 187.627 112.095 -6.622 1.00 52.42 O
ATOM 11 C2' A B1367 186.030 111.971 -8.477 1.00 52.42 C
ATOM 12 O2' A B1367 185.076 112.399 -7.542 1.00 52.42 O
ATOM 13 C1' A B1367 186.592 113.173 -9.228 1.00 52.42 C
ATOM 14 N9 A B1367 185.831 113.628 -10.395 1.00 33.45 N
ATOM 15 C8 A B1367 185.471 112.895 -11.492 1.00 33.45 C
ATOM 16 N7 A B1367 184.872 113.599 -12.426 1.00 33.45 N
ATOM 17 C5 A B1367 184.817 114.875 -11.899 1.00 33.45 C
ATOM 18 C6 A B1367 184.320 116.076 -12.413 1.00 33.45 C
ATOM 19 N6 A B1367 183.773 116.186 -13.616 1.00 33.45 N
ATOM 20 N1 A B1367 184.409 117.175 -11.646 1.00 33.45 N
ATOM 21 C2 A B1367 184.968 117.059 -10.437 1.00 33.45 C
ATOM 22 N3 A B1367 185.481 115.980 -9.841 1.00 33.45 N
ATOM 23 C4 A B1367 185.377 114.906 -10.639 1.00 33.45 C
ATOM 24 P C B1368 187.789 111.299 -5.233 1.00 68.39 P
ATOM 25 OP1 C B1368 186.805 110.191 -5.224 1.00124.13 O
ATOM 26 OP2 C B1368 187.779 112.298 -4.141 1.00124.13 O
ATOM 27 O5' C B1368 189.245 110.657 -5.299 1.00 68.39 O
TER
ATOM 2 P G A 10 181.810 110.589 -7.067 1.00 45.22 P
ATOM 3 OP1 G A 10 183.126 110.376 -7.694 1.00 39.76 O
ATOM 4 OP2 G A 10 181.289 109.571 -6.120 1.00 39.76 O
ATOM 5 O5' G A 10 181.879 112.015 -6.360 1.00 45.22 O
ATOM 6 C5' G A 10 182.612 112.199 -5.134 1.00 45.22 C
ATOM 7 C4' G A 10 182.585 113.652 -4.725 1.00 45.22 C
ATOM 8 O4' G A 10 183.393 114.437 -5.634 1.00 45.22 O
ATOM 9 C3' G A 10 181.215 114.296 -4.772 1.00 45.22 C
ATOM 10 O3' G A 10 180.493 114.022 -3.575 1.00 45.22 O
ATOM 11 C2' G A 10 181.553 115.768 -4.979 1.00 45.22 C
ATOM 12 O2' G A 10 181.991 116.368 -3.777 1.00 45.22 O
ATOM 13 C1' G A 10 182.762 115.679 -5.905 1.00 45.22 C
ATOM 14 N9 G A 10 182.434 115.682 -7.328 1.00 39.76 N
ATOM 15 C8 G A 10 182.629 114.627 -8.182 1.00 39.76 C
ATOM 16 N7 G A 10 182.258 114.877 -9.403 1.00 39.76 N
ATOM 17 C5 G A 10 181.783 116.174 -9.360 1.00 39.76 C
ATOM 18 C6 G A 10 181.236 116.951 -10.384 1.00 39.76 C
ATOM 19 O6 G A 10 181.035 116.629 -11.569 1.00 39.76 O
ATOM 20 N1 G A 10 180.886 118.214 -9.936 1.00 39.76 N
ATOM 21 C2 G A 10 181.025 118.658 -8.647 1.00 39.76 C
ATOM 22 N2 G A 10 180.617 119.931 -8.423 1.00 39.76 N
ATOM 23 N3 G A 10 181.523 117.918 -7.657 1.00 39.76 N
ATOM 24 C4 G A 10 181.885 116.695 -8.089 1.00 39.76 C
ATOM 25 P A A 11 178.980 113.460 -3.670 1.00 45.15 P
ATOM 26 OP1 A A 11 178.557 113.145 -2.274 1.00 34.77 O
ATOM 27 OP2 A A 11 178.904 112.387 -4.715 1.00 34.77 O
ATOM 28 O5' A A 11 178.153 114.730 -4.161 1.00 45.15 O
TER
ATOM 1 O3' C B1366 188.329 108.625 -12.274 1.00 41.59 O
ATOM 2 P A B1367 187.426 108.520 -10.963 1.00 52.42 P
ATOM 3 OP1 A B1367 188.100 107.591 -10.023 1.00 33.45 O
ATOM 4 OP2 A B1367 186.035 108.232 -11.398 1.00 33.45 O
ATOM 5 O5' A B1367 187.477 110.002 -10.375 1.00 52.42 O
ATOM 6 C5' A B1367 188.679 110.514 -9.774 1.00 52.42 C
ATOM 7 C4' A B1367 188.355 111.671 -8.870 1.00 52.42 C
ATOM 8 O4' A B1367 187.868 112.775 -9.675 1.00 52.42 O
ATOM 9 C3' A B1367 187.287 111.389 -7.826 1.00 52.42 C
ATOM 10 O3' A B1367 187.627 112.095 -6.622 1.00 52.42 O
ATOM 11 C2' A B1367 186.030 111.971 -8.477 1.00 52.42 C
ATOM 12 O2' A B1367 185.076 112.399 -7.542 1.00 52.42 O
ATOM 13 C1' A B1367 186.592 113.173 -9.228 1.00 52.42 C
ATOM 14 N9 A B1367 185.831 113.628 -10.395 1.00 33.45 N
ATOM 15 C8 A B1367 185.471 112.895 -11.492 1.00 33.45 C
ATOM 16 N7 A B1367 184.872 113.599 -12.426 1.00 33.45 N
ATOM 17 C5 A B1367 184.817 114.875 -11.899 1.00 33.45 C
ATOM 18 C6 A B1367 184.320 116.076 -12.413 1.00 33.45 C
ATOM 19 N6 A B1367 183.773 116.186 -13.616 1.00 33.45 N
ATOM 20 N1 A B1367 184.409 117.175 -11.646 1.00 33.45 N
ATOM 21 C2 A B1367 184.968 117.059 -10.437 1.00 33.45 C
ATOM 22 N3 A B1367 185.481 115.980 -9.841 1.00 33.45 N
ATOM 23 C4 A B1367 185.377 114.906 -10.639 1.00 33.45 C
ATOM 24 P C B1368 187.789 111.299 -5.233 1.00 68.39 P
ATOM 25 OP1 C B1368 186.805 110.191 -5.224 1.00124.13 O
ATOM 26 OP2 C B1368 187.779 112.298 -4.141 1.00124.13 O
ATOM 27 O5' C B1368 189.245 110.657 -5.299 1.00 68.39 O
TER
Atoms:
OP1: (183.126,110.376,-7.694)
OP2: (181.289,109.571,-6.120)
C3': (181.215,114.296,-4.772)
C1': (182.762,115.679,-5.905)
C5': (182.612,112.199,-5.134)
O6: (181.035,116.629,-11.569)
O4': (183.393,114.437,-5.634)
C8: (182.629,114.627,-8.182)
C2: (181.025,118.658,-8.647)
C6: (181.236,116.951,-10.384)
C5: (181.783,116.174,-9.360)
C4: (181.885,116.695,-8.089)
P: (181.810,110.589,-7.067)
C4': (182.585,113.652,-4.725)
C2': (181.553,115.768,-4.979)
O2': (181.991,116.368,-3.777)
N1: (180.886,118.214,-9.936)
N2: (180.617,119.931,-8.423)
N3: (181.523,117.918,-7.657)
N7: (182.258,114.877,-9.403)
N9: (182.434,115.682,-7.328)
O5': (181.879,112.015,-6.360)
O3': (180.493,114.022,-3.575)
OP2: (181.289,109.571,-6.120)
C3': (181.215,114.296,-4.772)
C1': (182.762,115.679,-5.905)
C5': (182.612,112.199,-5.134)
O6: (181.035,116.629,-11.569)
O4': (183.393,114.437,-5.634)
C8: (182.629,114.627,-8.182)
C2: (181.025,118.658,-8.647)
C6: (181.236,116.951,-10.384)
C5: (181.783,116.174,-9.360)
C4: (181.885,116.695,-8.089)
P: (181.810,110.589,-7.067)
C4': (182.585,113.652,-4.725)
C2': (181.553,115.768,-4.979)
O2': (181.991,116.368,-3.777)
N1: (180.886,118.214,-9.936)
N2: (180.617,119.931,-8.423)
N3: (181.523,117.918,-7.657)
N7: (182.258,114.877,-9.403)
N9: (182.434,115.682,-7.328)
O5': (181.879,112.015,-6.360)
O3': (180.493,114.022,-3.575)
OP1: (188.100,107.591,-10.023)
OP2: (186.035,108.232,-11.398)
C3': (187.287,111.389,-7.826)
C1': (186.592,113.173,-9.228)
C5': (188.679,110.514,-9.774)
O4': (187.868,112.775,-9.675)
C8: (185.471,112.895,-11.492)
O2': (185.076,112.399,-7.542)
C6: (184.320,116.076,-12.413)
C5: (184.817,114.875,-11.899)
C4: (185.377,114.906,-10.639)
P: (187.426,108.520,-10.963)
C4': (188.355,111.671,-8.870)
C2': (186.030,111.971,-8.477)
C2: (184.968,117.059,-10.437)
N1: (184.409,117.175,-11.646)
N3: (185.481,115.980,-9.841)
N6: (183.773,116.186,-13.616)
N7: (184.872,113.599,-12.426)
N9: (185.831,113.628,-10.395)
O5': (187.477,110.002,-10.375)
O3': (187.627,112.095,-6.622)
OP2: (186.035,108.232,-11.398)
C3': (187.287,111.389,-7.826)
C1': (186.592,113.173,-9.228)
C5': (188.679,110.514,-9.774)
O4': (187.868,112.775,-9.675)
C8: (185.471,112.895,-11.492)
O2': (185.076,112.399,-7.542)
C6: (184.320,116.076,-12.413)
C5: (184.817,114.875,-11.899)
C4: (185.377,114.906,-10.639)
P: (187.426,108.520,-10.963)
C4': (188.355,111.671,-8.870)
C2': (186.030,111.971,-8.477)
C2: (184.968,117.059,-10.437)
N1: (184.409,117.175,-11.646)
N3: (185.481,115.980,-9.841)
N6: (183.773,116.186,-13.616)
N7: (184.872,113.599,-12.426)
N9: (185.831,113.628,-10.395)
O5': (187.477,110.002,-10.375)
O3': (187.627,112.095,-6.622)
Image (generated by PyMOL):