Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A13:A1394
Extra
PDB:
ATOM 1 O3' U A 12 -95.934 33.989 -23.254 1.00 9.21 O
ATOM 2 P G A 13 -97.214 33.039 -23.455 1.00 9.83 P
ATOM 3 OP1 G A 13 -97.286 32.148 -22.270 1.00 9.83 O
ATOM 4 OP2 G A 13 -97.117 32.429 -24.819 1.00 9.83 O
ATOM 5 O5' G A 13 -98.416 34.065 -23.425 1.00 9.83 O
ATOM 6 C5' G A 13 -99.420 34.040 -24.432 1.00 9.83 C
ATOM 7 C4' G A 13 -99.942 35.420 -24.699 1.00 9.83 C
ATOM 8 O4' G A 13 -100.237 36.076 -23.432 1.00 9.83 O
ATOM 9 C3' G A 13 -98.967 36.352 -25.386 1.00 9.83 C
ATOM 10 O3' G A 13 -98.959 36.201 -26.788 1.00 9.83 O
ATOM 11 C2' G A 13 -99.430 37.718 -24.937 1.00 9.83 C
ATOM 12 O2' G A 13 -100.552 38.141 -25.705 1.00 9.83 O
ATOM 13 C1' G A 13 -99.892 37.437 -23.500 1.00 9.83 C
ATOM 14 N9 G A 13 -98.824 37.691 -22.514 1.00 9.53 N
ATOM 15 C8 G A 13 -98.257 36.703 -21.772 1.00 9.53 C
ATOM 16 N7 G A 13 -97.316 37.130 -20.978 1.00 9.53 N
ATOM 17 C5 G A 13 -97.254 38.482 -21.205 1.00 9.53 C
ATOM 18 C6 G A 13 -96.405 39.415 -20.615 1.00 9.53 C
ATOM 19 O6 G A 13 -95.549 39.171 -19.765 1.00 9.53 O
ATOM 20 N1 G A 13 -96.636 40.701 -21.108 1.00 9.53 N
ATOM 21 C2 G A 13 -97.579 41.046 -22.055 1.00 9.53 C
ATOM 22 N2 G A 13 -97.658 42.345 -22.410 1.00 9.53 N
ATOM 23 N3 G A 13 -98.376 40.148 -22.617 1.00 9.53 N
ATOM 24 C4 G A 13 -98.173 38.876 -22.149 1.00 9.53 C
ATOM 25 P A A 14 -97.607 36.480 -27.590 1.00 8.77 P
ATOM 26 OP1 A A 14 -97.884 36.288 -29.051 1.00 8.77 O
ATOM 27 OP2 A A 14 -96.564 35.642 -26.950 1.00 8.77 O
ATOM 28 O5' A A 14 -97.344 38.019 -27.273 1.00 8.77 O
TER
ATOM 1 O3' C B1393 -98.505 29.796 -15.556 1.00 11.18 O
ATOM 2 P A B1394 -98.553 29.699 -17.134 1.00 12.06 P
ATOM 3 OP1 A B1394 -99.420 28.535 -17.477 1.00 12.06 O
ATOM 4 OP2 A B1394 -97.147 29.717 -17.604 1.00 12.06 O
ATOM 5 O5' A B1394 -99.295 31.043 -17.536 1.00 12.06 O
ATOM 6 C5' A B1394 -100.677 31.226 -17.225 1.00 12.06 C
ATOM 7 C4' A B1394 -101.319 32.260 -18.117 1.00 12.06 C
ATOM 8 O4' A B1394 -100.850 33.572 -17.726 1.00 12.06 O
ATOM 9 C3' A B1394 -101.002 32.122 -19.592 1.00 12.06 C
ATOM 10 O3' A B1394 -102.121 32.556 -20.365 1.00 12.06 O
ATOM 11 C2' A B1394 -99.815 33.073 -19.774 1.00 12.06 C
ATOM 12 O2' A B1394 -99.654 33.570 -21.088 1.00 12.06 O
ATOM 13 C1' A B1394 -100.141 34.181 -18.778 1.00 12.06 C
ATOM 14 N9 A B1394 -98.979 34.815 -18.175 1.00 12.18 N
ATOM 15 C8 A B1394 -97.997 34.167 -17.509 1.00 12.18 C
ATOM 16 N7 A B1394 -97.088 34.957 -17.016 1.00 12.18 N
ATOM 17 C5 A B1394 -97.534 36.213 -17.357 1.00 12.18 C
ATOM 18 C6 A B1394 -97.010 37.480 -17.106 1.00 12.18 C
ATOM 19 N6 A B1394 -95.877 37.645 -16.420 1.00 12.18 N
ATOM 20 N1 A B1394 -97.676 38.557 -17.574 1.00 12.18 N
ATOM 21 C2 A B1394 -98.791 38.345 -18.255 1.00 12.18 C
ATOM 22 N3 A B1394 -99.373 37.194 -18.554 1.00 12.18 N
ATOM 23 C4 A B1394 -98.700 36.149 -18.059 1.00 12.18 C
ATOM 24 P C B1395 -103.337 31.551 -20.650 1.00 48.41 P
ATOM 25 OP1 C B1395 -102.757 30.196 -20.802 1.00 48.41 O
ATOM 26 OP2 C B1395 -104.109 32.116 -21.768 1.00 48.41 O
ATOM 27 O5' C B1395 -104.190 31.640 -19.311 1.00 48.41 O
TER
ATOM 2 P G A 13 -97.214 33.039 -23.455 1.00 9.83 P
ATOM 3 OP1 G A 13 -97.286 32.148 -22.270 1.00 9.83 O
ATOM 4 OP2 G A 13 -97.117 32.429 -24.819 1.00 9.83 O
ATOM 5 O5' G A 13 -98.416 34.065 -23.425 1.00 9.83 O
ATOM 6 C5' G A 13 -99.420 34.040 -24.432 1.00 9.83 C
ATOM 7 C4' G A 13 -99.942 35.420 -24.699 1.00 9.83 C
ATOM 8 O4' G A 13 -100.237 36.076 -23.432 1.00 9.83 O
ATOM 9 C3' G A 13 -98.967 36.352 -25.386 1.00 9.83 C
ATOM 10 O3' G A 13 -98.959 36.201 -26.788 1.00 9.83 O
ATOM 11 C2' G A 13 -99.430 37.718 -24.937 1.00 9.83 C
ATOM 12 O2' G A 13 -100.552 38.141 -25.705 1.00 9.83 O
ATOM 13 C1' G A 13 -99.892 37.437 -23.500 1.00 9.83 C
ATOM 14 N9 G A 13 -98.824 37.691 -22.514 1.00 9.53 N
ATOM 15 C8 G A 13 -98.257 36.703 -21.772 1.00 9.53 C
ATOM 16 N7 G A 13 -97.316 37.130 -20.978 1.00 9.53 N
ATOM 17 C5 G A 13 -97.254 38.482 -21.205 1.00 9.53 C
ATOM 18 C6 G A 13 -96.405 39.415 -20.615 1.00 9.53 C
ATOM 19 O6 G A 13 -95.549 39.171 -19.765 1.00 9.53 O
ATOM 20 N1 G A 13 -96.636 40.701 -21.108 1.00 9.53 N
ATOM 21 C2 G A 13 -97.579 41.046 -22.055 1.00 9.53 C
ATOM 22 N2 G A 13 -97.658 42.345 -22.410 1.00 9.53 N
ATOM 23 N3 G A 13 -98.376 40.148 -22.617 1.00 9.53 N
ATOM 24 C4 G A 13 -98.173 38.876 -22.149 1.00 9.53 C
ATOM 25 P A A 14 -97.607 36.480 -27.590 1.00 8.77 P
ATOM 26 OP1 A A 14 -97.884 36.288 -29.051 1.00 8.77 O
ATOM 27 OP2 A A 14 -96.564 35.642 -26.950 1.00 8.77 O
ATOM 28 O5' A A 14 -97.344 38.019 -27.273 1.00 8.77 O
TER
ATOM 1 O3' C B1393 -98.505 29.796 -15.556 1.00 11.18 O
ATOM 2 P A B1394 -98.553 29.699 -17.134 1.00 12.06 P
ATOM 3 OP1 A B1394 -99.420 28.535 -17.477 1.00 12.06 O
ATOM 4 OP2 A B1394 -97.147 29.717 -17.604 1.00 12.06 O
ATOM 5 O5' A B1394 -99.295 31.043 -17.536 1.00 12.06 O
ATOM 6 C5' A B1394 -100.677 31.226 -17.225 1.00 12.06 C
ATOM 7 C4' A B1394 -101.319 32.260 -18.117 1.00 12.06 C
ATOM 8 O4' A B1394 -100.850 33.572 -17.726 1.00 12.06 O
ATOM 9 C3' A B1394 -101.002 32.122 -19.592 1.00 12.06 C
ATOM 10 O3' A B1394 -102.121 32.556 -20.365 1.00 12.06 O
ATOM 11 C2' A B1394 -99.815 33.073 -19.774 1.00 12.06 C
ATOM 12 O2' A B1394 -99.654 33.570 -21.088 1.00 12.06 O
ATOM 13 C1' A B1394 -100.141 34.181 -18.778 1.00 12.06 C
ATOM 14 N9 A B1394 -98.979 34.815 -18.175 1.00 12.18 N
ATOM 15 C8 A B1394 -97.997 34.167 -17.509 1.00 12.18 C
ATOM 16 N7 A B1394 -97.088 34.957 -17.016 1.00 12.18 N
ATOM 17 C5 A B1394 -97.534 36.213 -17.357 1.00 12.18 C
ATOM 18 C6 A B1394 -97.010 37.480 -17.106 1.00 12.18 C
ATOM 19 N6 A B1394 -95.877 37.645 -16.420 1.00 12.18 N
ATOM 20 N1 A B1394 -97.676 38.557 -17.574 1.00 12.18 N
ATOM 21 C2 A B1394 -98.791 38.345 -18.255 1.00 12.18 C
ATOM 22 N3 A B1394 -99.373 37.194 -18.554 1.00 12.18 N
ATOM 23 C4 A B1394 -98.700 36.149 -18.059 1.00 12.18 C
ATOM 24 P C B1395 -103.337 31.551 -20.650 1.00 48.41 P
ATOM 25 OP1 C B1395 -102.757 30.196 -20.802 1.00 48.41 O
ATOM 26 OP2 C B1395 -104.109 32.116 -21.768 1.00 48.41 O
ATOM 27 O5' C B1395 -104.190 31.640 -19.311 1.00 48.41 O
TER
Atoms:
OP1: (-97.286,32.148,-22.270)
OP2: (-97.117,32.429,-24.819)
C3': (-98.967,36.352,-25.386)
C1': (-99.892,37.437,-23.500)
C5': (-99.420,34.040,-24.432)
O6: (-95.549,39.171,-19.765)
O4': (-100.237,36.076,-23.432)
C8: (-98.257,36.703,-21.772)
C2: (-97.579,41.046,-22.055)
C6: (-96.405,39.415,-20.615)
C5: (-97.254,38.482,-21.205)
C4: (-98.173,38.876,-22.149)
P: (-97.214,33.039,-23.455)
C4': (-99.942,35.420,-24.699)
C2': (-99.430,37.718,-24.937)
O2': (-100.552,38.141,-25.705)
N1: (-96.636,40.701,-21.108)
N2: (-97.658,42.345,-22.410)
N3: (-98.376,40.148,-22.617)
N7: (-97.316,37.130,-20.978)
N9: (-98.824,37.691,-22.514)
O5': (-98.416,34.065,-23.425)
O3': (-98.959,36.201,-26.788)
OP2: (-97.117,32.429,-24.819)
C3': (-98.967,36.352,-25.386)
C1': (-99.892,37.437,-23.500)
C5': (-99.420,34.040,-24.432)
O6: (-95.549,39.171,-19.765)
O4': (-100.237,36.076,-23.432)
C8: (-98.257,36.703,-21.772)
C2: (-97.579,41.046,-22.055)
C6: (-96.405,39.415,-20.615)
C5: (-97.254,38.482,-21.205)
C4: (-98.173,38.876,-22.149)
P: (-97.214,33.039,-23.455)
C4': (-99.942,35.420,-24.699)
C2': (-99.430,37.718,-24.937)
O2': (-100.552,38.141,-25.705)
N1: (-96.636,40.701,-21.108)
N2: (-97.658,42.345,-22.410)
N3: (-98.376,40.148,-22.617)
N7: (-97.316,37.130,-20.978)
N9: (-98.824,37.691,-22.514)
O5': (-98.416,34.065,-23.425)
O3': (-98.959,36.201,-26.788)
OP1: (-99.420,28.535,-17.477)
OP2: (-97.147,29.717,-17.604)
C3': (-101.002,32.122,-19.592)
C1': (-100.141,34.181,-18.778)
C5': (-100.677,31.226,-17.225)
O4': (-100.850,33.572,-17.726)
C8: (-97.997,34.167,-17.509)
O2': (-99.654,33.570,-21.088)
C6: (-97.010,37.480,-17.106)
C5: (-97.534,36.213,-17.357)
C4: (-98.700,36.149,-18.059)
P: (-98.553,29.699,-17.134)
C4': (-101.319,32.260,-18.117)
C2': (-99.815,33.073,-19.774)
C2: (-98.791,38.345,-18.255)
N1: (-97.676,38.557,-17.574)
N3: (-99.373,37.194,-18.554)
N6: (-95.877,37.645,-16.420)
N7: (-97.088,34.957,-17.016)
N9: (-98.979,34.815,-18.175)
O5': (-99.295,31.043,-17.536)
O3': (-102.121,32.556,-20.365)
OP2: (-97.147,29.717,-17.604)
C3': (-101.002,32.122,-19.592)
C1': (-100.141,34.181,-18.778)
C5': (-100.677,31.226,-17.225)
O4': (-100.850,33.572,-17.726)
C8: (-97.997,34.167,-17.509)
O2': (-99.654,33.570,-21.088)
C6: (-97.010,37.480,-17.106)
C5: (-97.534,36.213,-17.357)
C4: (-98.700,36.149,-18.059)
P: (-98.553,29.699,-17.134)
C4': (-101.319,32.260,-18.117)
C2': (-99.815,33.073,-19.774)
C2: (-98.791,38.345,-18.255)
N1: (-97.676,38.557,-17.574)
N3: (-99.373,37.194,-18.554)
N6: (-95.877,37.645,-16.420)
N7: (-97.088,34.957,-17.016)
N9: (-98.979,34.815,-18.175)
O5': (-99.295,31.043,-17.536)
O3': (-102.121,32.556,-20.365)
Image (generated by PyMOL):