ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N35:C2:C1

Extra

PDB:
ATOM 1 O3' A A 1 -15.224 79.778 22.130 1.00 42.91 O
ATOM 2 P G A 2 -14.264 79.249 23.310 1.00 37.65 P
ATOM 3 OP1 G A 2 -14.749 77.897 23.700 1.00 38.05 O
ATOM 4 OP2 G A 2 -14.152 80.312 24.341 1.00 35.00 O
ATOM 5 O5' G A 2 -12.847 79.098 22.600 1.00 34.63 O
ATOM 6 C5' G A 2 -12.640 78.106 21.599 1.00 34.25 C
ATOM 7 C4' G A 2 -11.533 78.524 20.660 1.00 34.12 C
ATOM 8 O4' G A 2 -11.970 79.637 19.836 1.00 35.09 O
ATOM 9 C3' G A 2 -10.274 79.025 21.341 1.00 33.00 C
ATOM 10 O3' G A 2 -9.428 77.950 21.696 1.00 32.05 O
ATOM 11 C2' G A 2 -9.672 79.928 20.277 1.00 32.81 C
ATOM 12 O2' G A 2 -9.050 79.220 19.230 1.00 32.24 O
ATOM 13 C1' G A 2 -10.930 80.595 19.738 1.00 34.23 C
ATOM 14 N9 G A 2 -11.321 81.730 20.558 1.00 34.62 N
ATOM 15 C8 G A 2 -12.353 81.767 21.464 1.00 34.58 C
ATOM 16 N7 G A 2 -12.488 82.927 22.040 1.00 34.59 N
ATOM 17 C5 G A 2 -11.484 83.703 21.483 1.00 35.55 C
ATOM 18 C6 G A 2 -11.151 85.050 21.711 1.00 36.54 C
ATOM 19 O6 G A 2 -11.701 85.855 22.474 1.00 38.54 O
ATOM 20 N1 G A 2 -10.053 85.445 20.946 1.00 39.00 N
ATOM 21 C2 G A 2 -9.362 84.630 20.073 1.00 38.88 C
ATOM 22 N2 G A 2 -8.300 85.187 19.458 1.00 38.75 N
ATOM 23 N3 G A 2 -9.683 83.362 19.835 1.00 34.63 N
ATOM 24 C4 G A 2 -10.745 82.971 20.572 1.00 34.66 C
ATOM 25 P C A 3 -8.354 78.154 22.859 1.00 27.97 P
ATOM 26 OP1 C A 3 -7.656 76.872 23.093 1.00 32.82 O
ATOM 27 OP2 C A 3 -9.039 78.825 23.984 1.00 33.87 O
ATOM 28 O5' C A 3 -7.326 79.189 22.225 1.00 34.39 O
TER

ATOM 1 O3' U B 0 -18.367 75.833 18.358 1.00 59.30 O
ATOM 2 P A B 1 -17.160 75.675 19.406 1.00 54.69 P
ATOM 3 OP1 A B 1 -15.900 75.649 18.626 1.00 55.43 O
ATOM 4 OP2 A B 1 -17.480 74.543 20.308 1.00 56.89 O
ATOM 5 O5' A B 1 -17.221 77.020 20.261 1.00 54.23 O
ATOM 6 C5' A B 1 -16.803 78.263 19.694 1.00 52.85 C
ATOM 7 C4' A B 1 -17.110 79.414 20.629 1.00 51.42 C
ATOM 8 O4' A B 1 -18.550 79.540 20.792 1.00 52.57 O
ATOM 9 C3' A B 1 -16.568 79.311 22.049 1.00 48.58 C
ATOM 10 O3' A B 1 -15.224 79.778 22.130 1.00 42.91 O
ATOM 11 C2' A B 1 -17.518 80.229 22.801 1.00 50.19 C
ATOM 12 O2' A B 1 -17.223 81.589 22.575 1.00 49.44 O
ATOM 13 C1' A B 1 -18.849 79.878 22.137 1.00 54.17 C
ATOM 14 N9 A B 1 -19.451 78.704 22.763 1.00 59.28 N
ATOM 15 C8 A B 1 -19.366 77.395 22.341 1.00 60.69 C
ATOM 16 N7 A B 1 -19.977 76.545 23.129 1.00 62.56 N
ATOM 17 C5 A B 1 -20.507 77.345 24.134 1.00 63.20 C
ATOM 18 C6 A B 1 -21.266 77.045 25.282 1.00 64.09 C
ATOM 19 N6 A B 1 -21.636 75.805 25.624 1.00 63.18 N
ATOM 20 N1 A B 1 -21.638 78.076 26.076 1.00 64.60 N
ATOM 21 C2 A B 1 -21.265 79.318 25.730 1.00 64.28 C
ATOM 22 N3 A B 1 -20.552 79.726 24.679 1.00 62.97 N
ATOM 23 C4 A B 1 -20.200 78.679 23.913 1.00 61.74 C
ATOM 24 P G B 2 -14.264 79.249 23.310 1.00 37.65 P
ATOM 25 OP1 G B 2 -14.749 77.897 23.700 1.00 38.05 O
ATOM 26 OP2 G B 2 -14.152 80.312 24.341 1.00 35.00 O
ATOM 27 O5' G B 2 -12.847 79.098 22.600 1.00 34.63 O
TER

Atoms:
OP1: (-14.749,77.897,23.700)
OP2: (-14.152,80.312,24.341)
C3': (-10.274,79.025,21.341)
C1': (-10.930,80.595,19.738)
C5': (-12.640,78.106,21.599)
O6: (-11.701,85.855,22.474)
O4': (-11.970,79.637,19.836)
C8: (-12.353,81.767,21.464)
C2: (-9.362,84.630,20.073)
C6: (-11.151,85.050,21.711)
C5: (-11.484,83.703,21.483)
C4: (-10.745,82.971,20.572)
P: (-14.264,79.249,23.310)
C4': (-11.533,78.524,20.660)
C2': (-9.672,79.928,20.277)
O2': (-9.050,79.220,19.230)
N1: (-10.053,85.445,20.946)
N2: (-8.300,85.187,19.458)
N3: (-9.683,83.362,19.835)
N7: (-12.488,82.927,22.040)
N9: (-11.321,81.730,20.558)
O5': (-12.847,79.098,22.600)
O3': (-9.428,77.950,21.696)
OP1: (-15.900,75.649,18.626)
OP2: (-17.480,74.543,20.308)
C3': (-16.568,79.311,22.049)
C1': (-18.849,79.878,22.137)
C5': (-16.803,78.263,19.694)
O4': (-18.550,79.540,20.792)
C8: (-19.366,77.395,22.341)
O2': (-17.223,81.589,22.575)
C6: (-21.266,77.045,25.282)
C5: (-20.507,77.345,24.134)
C4: (-20.200,78.679,23.913)
P: (-17.160,75.675,19.406)
C4': (-17.110,79.414,20.629)
C2': (-17.518,80.229,22.801)
C2: (-21.265,79.318,25.730)
N1: (-21.638,78.076,26.076)
N3: (-20.552,79.726,24.679)
N6: (-21.636,75.805,25.624)
N7: (-19.977,76.545,23.129)
N9: (-19.451,78.704,22.763)
O5': (-17.221,77.020,20.261)
O3': (-15.224,79.778,22.130)
Image (generated by PyMOL):
PyMOL image
show in jmol