Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X42:X41
Extra
PDB:
ATOM 1 O3' A A 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 2 P G A 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 3 OP1 G A 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 4 OP2 G A 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 5 O5' G A 42 0.179 50.570 6.946 1.00 29.96 O
ATOM 6 C5' G A 42 0.309 50.694 8.373 1.00 27.27 C
ATOM 7 C4' G A 42 0.559 49.336 9.027 1.00 25.83 C
ATOM 8 O4' G A 42 -0.569 48.452 8.790 1.00 24.46 O
ATOM 9 C3' G A 42 1.798 48.573 8.549 1.00 25.22 C
ATOM 10 O3' G A 42 2.407 47.870 9.627 1.00 26.05 O
ATOM 11 C2' G A 42 1.240 47.598 7.518 1.00 24.28 C
ATOM 12 O2' G A 42 1.987 46.400 7.408 1.00 22.99 O
ATOM 13 C1' G A 42 -0.157 47.306 8.065 1.00 23.68 C
ATOM 14 N9 G A 42 -1.071 47.042 6.959 1.00 22.69 N
ATOM 15 C8 G A 42 -1.957 47.907 6.365 1.00 22.38 C
ATOM 16 N7 G A 42 -2.620 47.374 5.377 1.00 22.40 N
ATOM 17 C5 G A 42 -2.131 46.078 5.302 1.00 22.43 C
ATOM 18 C6 G A 42 -2.466 45.021 4.417 1.00 22.92 C
ATOM 19 O6 G A 42 -3.300 45.031 3.493 1.00 22.93 O
ATOM 20 N1 G A 42 -1.726 43.865 4.698 1.00 22.47 N
ATOM 21 C2 G A 42 -0.780 43.753 5.700 1.00 22.22 C
ATOM 22 N2 G A 42 -0.155 42.575 5.835 1.00 21.76 N
ATOM 23 N3 G A 42 -0.464 44.738 6.524 1.00 21.90 N
ATOM 24 C4 G A 42 -1.177 45.862 6.270 1.00 22.13 C
ATOM 25 P G A 43 3.976 48.004 9.893 1.00 27.03 P
ATOM 26 OP1 G A 43 4.317 47.047 10.968 1.00 26.87 O
ATOM 27 OP2 G A 43 4.296 49.444 10.037 1.00 27.23 O
ATOM 28 O5' G A 43 4.626 47.446 8.544 1.00 26.70 O
TER
ATOM 1 O3' C B 40 -4.473 54.905 1.742 1.00 44.85 O
ATOM 2 P A B 41 -4.447 53.504 2.517 1.00 42.09 P
ATOM 3 OP1 A B 41 -3.099 52.926 2.318 1.00 42.57 O
ATOM 4 OP2 A B 41 -5.650 52.725 2.133 1.00 41.44 O
ATOM 5 O5' A B 41 -4.617 53.959 4.043 1.00 39.78 O
ATOM 6 C5' A B 41 -3.486 54.312 4.838 1.00 36.29 C
ATOM 7 C4' A B 41 -3.436 53.436 6.077 1.00 33.72 C
ATOM 8 O4' A B 41 -4.692 53.549 6.789 1.00 32.54 O
ATOM 9 C3' A B 41 -3.230 51.942 5.801 1.00 32.46 C
ATOM 10 O3' A B 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 11 C2' A B 41 -4.554 51.311 6.221 1.00 31.90 C
ATOM 12 O2' A B 41 -4.402 50.003 6.733 1.00 32.22 O
ATOM 13 C1' A B 41 -5.009 52.278 7.309 1.00 31.23 C
ATOM 14 N9 A B 41 -6.433 52.209 7.638 1.00 30.34 N
ATOM 15 C8 A B 41 -7.491 52.254 6.766 1.00 30.18 C
ATOM 16 N7 A B 41 -8.667 52.161 7.341 1.00 29.93 N
ATOM 17 C5 A B 41 -8.362 52.050 8.691 1.00 29.91 C
ATOM 18 C6 A B 41 -9.169 51.916 9.841 1.00 29.41 C
ATOM 19 N6 A B 41 -10.503 51.879 9.790 1.00 29.86 N
ATOM 20 N1 A B 41 -8.553 51.824 11.043 1.00 29.35 N
ATOM 21 C2 A B 41 -7.213 51.868 11.092 1.00 28.97 C
ATOM 22 N3 A B 41 -6.351 51.990 10.081 1.00 29.24 N
ATOM 23 C4 A B 41 -6.989 52.075 8.895 1.00 29.86 C
ATOM 24 P G B 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 25 OP1 G B 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 26 OP2 G B 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 27 O5' G B 42 0.179 50.570 6.946 1.00 29.96 O
TER
ATOM 2 P G A 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 3 OP1 G A 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 4 OP2 G A 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 5 O5' G A 42 0.179 50.570 6.946 1.00 29.96 O
ATOM 6 C5' G A 42 0.309 50.694 8.373 1.00 27.27 C
ATOM 7 C4' G A 42 0.559 49.336 9.027 1.00 25.83 C
ATOM 8 O4' G A 42 -0.569 48.452 8.790 1.00 24.46 O
ATOM 9 C3' G A 42 1.798 48.573 8.549 1.00 25.22 C
ATOM 10 O3' G A 42 2.407 47.870 9.627 1.00 26.05 O
ATOM 11 C2' G A 42 1.240 47.598 7.518 1.00 24.28 C
ATOM 12 O2' G A 42 1.987 46.400 7.408 1.00 22.99 O
ATOM 13 C1' G A 42 -0.157 47.306 8.065 1.00 23.68 C
ATOM 14 N9 G A 42 -1.071 47.042 6.959 1.00 22.69 N
ATOM 15 C8 G A 42 -1.957 47.907 6.365 1.00 22.38 C
ATOM 16 N7 G A 42 -2.620 47.374 5.377 1.00 22.40 N
ATOM 17 C5 G A 42 -2.131 46.078 5.302 1.00 22.43 C
ATOM 18 C6 G A 42 -2.466 45.021 4.417 1.00 22.92 C
ATOM 19 O6 G A 42 -3.300 45.031 3.493 1.00 22.93 O
ATOM 20 N1 G A 42 -1.726 43.865 4.698 1.00 22.47 N
ATOM 21 C2 G A 42 -0.780 43.753 5.700 1.00 22.22 C
ATOM 22 N2 G A 42 -0.155 42.575 5.835 1.00 21.76 N
ATOM 23 N3 G A 42 -0.464 44.738 6.524 1.00 21.90 N
ATOM 24 C4 G A 42 -1.177 45.862 6.270 1.00 22.13 C
ATOM 25 P G A 43 3.976 48.004 9.893 1.00 27.03 P
ATOM 26 OP1 G A 43 4.317 47.047 10.968 1.00 26.87 O
ATOM 27 OP2 G A 43 4.296 49.444 10.037 1.00 27.23 O
ATOM 28 O5' G A 43 4.626 47.446 8.544 1.00 26.70 O
TER
ATOM 1 O3' C B 40 -4.473 54.905 1.742 1.00 44.85 O
ATOM 2 P A B 41 -4.447 53.504 2.517 1.00 42.09 P
ATOM 3 OP1 A B 41 -3.099 52.926 2.318 1.00 42.57 O
ATOM 4 OP2 A B 41 -5.650 52.725 2.133 1.00 41.44 O
ATOM 5 O5' A B 41 -4.617 53.959 4.043 1.00 39.78 O
ATOM 6 C5' A B 41 -3.486 54.312 4.838 1.00 36.29 C
ATOM 7 C4' A B 41 -3.436 53.436 6.077 1.00 33.72 C
ATOM 8 O4' A B 41 -4.692 53.549 6.789 1.00 32.54 O
ATOM 9 C3' A B 41 -3.230 51.942 5.801 1.00 32.46 C
ATOM 10 O3' A B 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 11 C2' A B 41 -4.554 51.311 6.221 1.00 31.90 C
ATOM 12 O2' A B 41 -4.402 50.003 6.733 1.00 32.22 O
ATOM 13 C1' A B 41 -5.009 52.278 7.309 1.00 31.23 C
ATOM 14 N9 A B 41 -6.433 52.209 7.638 1.00 30.34 N
ATOM 15 C8 A B 41 -7.491 52.254 6.766 1.00 30.18 C
ATOM 16 N7 A B 41 -8.667 52.161 7.341 1.00 29.93 N
ATOM 17 C5 A B 41 -8.362 52.050 8.691 1.00 29.91 C
ATOM 18 C6 A B 41 -9.169 51.916 9.841 1.00 29.41 C
ATOM 19 N6 A B 41 -10.503 51.879 9.790 1.00 29.86 N
ATOM 20 N1 A B 41 -8.553 51.824 11.043 1.00 29.35 N
ATOM 21 C2 A B 41 -7.213 51.868 11.092 1.00 28.97 C
ATOM 22 N3 A B 41 -6.351 51.990 10.081 1.00 29.24 N
ATOM 23 C4 A B 41 -6.989 52.075 8.895 1.00 29.86 C
ATOM 24 P G B 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 25 OP1 G B 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 26 OP2 G B 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 27 O5' G B 42 0.179 50.570 6.946 1.00 29.96 O
TER
Atoms:
OP1: (-0.187,52.999,6.460)
OP2: (-0.560,51.230,4.646)
C3': (1.798,48.573,8.549)
C1': (-0.157,47.306,8.065)
C5': (0.309,50.694,8.373)
O6: (-3.300,45.031,3.493)
O4': (-0.569,48.452,8.790)
C8: (-1.957,47.907,6.365)
C2: (-0.780,43.753,5.700)
C6: (-2.466,45.021,4.417)
C5: (-2.131,46.078,5.302)
C4: (-1.177,45.862,6.270)
P: (-0.626,51.640,6.066)
C4': (0.559,49.336,9.027)
C2': (1.240,47.598,7.518)
O2': (1.987,46.400,7.408)
N1: (-1.726,43.865,4.698)
N2: (-0.155,42.575,5.835)
N3: (-0.464,44.738,6.524)
N7: (-2.620,47.374,5.377)
N9: (-1.071,47.042,6.959)
O5': (0.179,50.570,6.946)
O3': (2.407,47.870,9.627)
OP2: (-0.560,51.230,4.646)
C3': (1.798,48.573,8.549)
C1': (-0.157,47.306,8.065)
C5': (0.309,50.694,8.373)
O6: (-3.300,45.031,3.493)
O4': (-0.569,48.452,8.790)
C8: (-1.957,47.907,6.365)
C2: (-0.780,43.753,5.700)
C6: (-2.466,45.021,4.417)
C5: (-2.131,46.078,5.302)
C4: (-1.177,45.862,6.270)
P: (-0.626,51.640,6.066)
C4': (0.559,49.336,9.027)
C2': (1.240,47.598,7.518)
O2': (1.987,46.400,7.408)
N1: (-1.726,43.865,4.698)
N2: (-0.155,42.575,5.835)
N3: (-0.464,44.738,6.524)
N7: (-2.620,47.374,5.377)
N9: (-1.071,47.042,6.959)
O5': (0.179,50.570,6.946)
O3': (2.407,47.870,9.627)
OP1: (-3.099,52.926,2.318)
OP2: (-5.650,52.725,2.133)
C3': (-3.230,51.942,5.801)
C1': (-5.009,52.278,7.309)
C5': (-3.486,54.312,4.838)
O4': (-4.692,53.549,6.789)
C8: (-7.491,52.254,6.766)
O2': (-4.402,50.003,6.733)
C6: (-9.169,51.916,9.841)
C5: (-8.362,52.050,8.691)
C4: (-6.989,52.075,8.895)
P: (-4.447,53.504,2.517)
C4': (-3.436,53.436,6.077)
C2': (-4.554,51.311,6.221)
C2: (-7.213,51.868,11.092)
N1: (-8.553,51.824,11.043)
N3: (-6.351,51.990,10.081)
N6: (-10.503,51.879,9.790)
N7: (-8.667,52.161,7.341)
N9: (-6.433,52.209,7.638)
O5': (-4.617,53.959,4.043)
O3': (-2.135,51.427,6.557)
OP2: (-5.650,52.725,2.133)
C3': (-3.230,51.942,5.801)
C1': (-5.009,52.278,7.309)
C5': (-3.486,54.312,4.838)
O4': (-4.692,53.549,6.789)
C8: (-7.491,52.254,6.766)
O2': (-4.402,50.003,6.733)
C6: (-9.169,51.916,9.841)
C5: (-8.362,52.050,8.691)
C4: (-6.989,52.075,8.895)
P: (-4.447,53.504,2.517)
C4': (-3.436,53.436,6.077)
C2': (-4.554,51.311,6.221)
C2: (-7.213,51.868,11.092)
N1: (-8.553,51.824,11.043)
N3: (-6.351,51.990,10.081)
N6: (-10.503,51.879,9.790)
N7: (-8.667,52.161,7.341)
N9: (-6.433,52.209,7.638)
O5': (-4.617,53.959,4.043)
O3': (-2.135,51.427,6.557)
Image (generated by PyMOL):