Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:B84:B13
Extra
PDB:
ATOM 1 O3' U A 83 109.119 25.210 33.579 1.00122.99 O
ATOM 2 P G A 84 108.709 26.197 34.784 1.00122.47 P
ATOM 3 OP1 G A 84 109.701 27.299 34.843 1.00116.79 O
ATOM 4 OP2 G A 84 108.433 25.397 36.000 1.00130.35 O
ATOM 5 O5' G A 84 107.325 26.812 34.297 1.00130.63 O
ATOM 6 C5' G A 84 107.142 28.216 34.209 1.00123.65 C
ATOM 7 C4' G A 84 106.493 28.571 32.895 1.00128.78 C
ATOM 8 O4' G A 84 105.187 27.936 32.791 1.00133.93 O
ATOM 9 C3' G A 84 106.205 30.048 32.734 1.00133.19 C
ATOM 10 O3' G A 84 107.376 30.719 32.298 1.00132.24 O
ATOM 11 C2' G A 84 105.071 30.039 31.718 1.00130.25 C
ATOM 12 O2' G A 84 105.510 29.826 30.392 1.00121.39 O
ATOM 13 C1' G A 84 104.258 28.836 32.204 1.00128.56 C
ATOM 14 N9 G A 84 103.294 29.209 33.236 1.00128.67 N
ATOM 15 C8 G A 84 103.115 28.605 34.459 1.00126.64 C
ATOM 16 N7 G A 84 102.208 29.191 35.192 1.00125.94 N
ATOM 17 C5 G A 84 101.753 30.240 34.403 1.00127.06 C
ATOM 18 C6 G A 84 100.770 31.227 34.665 1.00126.06 C
ATOM 19 O6 G A 84 100.085 31.381 35.682 1.00124.78 O
ATOM 20 N1 G A 84 100.620 32.097 33.590 1.00127.97 N
ATOM 21 C2 G A 84 101.326 32.029 32.413 1.00130.64 C
ATOM 22 N2 G A 84 101.039 32.965 31.492 1.00131.78 N
ATOM 23 N3 G A 84 102.245 31.113 32.157 1.00130.09 N
ATOM 24 C4 G A 84 102.406 30.257 33.188 1.00128.02 C
ATOM 25 P G A 85 108.022 31.858 33.227 1.00131.93 P
ATOM 26 OP1 G A 85 109.470 31.920 32.911 1.00134.49 O
ATOM 27 OP2 G A 85 107.590 31.603 34.624 1.00119.41 O
ATOM 28 O5' G A 85 107.331 33.192 32.695 1.00133.69 O
TER
ATOM 1 O3' C B 12 99.644 22.247 39.798 1.00108.80 O
ATOM 2 P A B 13 100.984 23.138 39.725 1.00107.84 P
ATOM 3 OP1 A B 13 102.041 22.419 40.487 1.00 89.31 O
ATOM 4 OP2 A B 13 100.623 24.534 40.102 1.00 82.81 O
ATOM 5 O5' A B 13 101.367 23.108 38.179 1.00 87.28 O
ATOM 6 C5' A B 13 101.230 21.907 37.432 1.00 89.29 C
ATOM 7 C4' A B 13 101.505 22.162 35.974 1.00100.02 C
ATOM 8 O4' A B 13 100.578 23.169 35.497 1.00109.30 O
ATOM 9 C3' A B 13 102.892 22.732 35.728 1.00112.57 C
ATOM 10 O3' A B 13 103.720 21.970 34.850 1.00121.46 O
ATOM 11 C2' A B 13 102.733 24.245 35.587 1.00106.96 C
ATOM 12 O2' A B 13 103.469 24.785 34.511 1.00112.04 O
ATOM 13 C1' A B 13 101.256 24.379 35.219 1.00106.32 C
ATOM 14 N9 A B 13 100.537 25.483 35.851 1.00 99.18 N
ATOM 15 C8 A B 13 100.416 25.796 37.180 1.00 99.20 C
ATOM 16 N7 A B 13 99.681 26.860 37.406 1.00 97.22 N
ATOM 17 C5 A B 13 99.296 27.275 36.138 1.00 94.87 C
ATOM 18 C6 A B 13 98.505 28.348 35.691 1.00 93.76 C
ATOM 19 N6 A B 13 97.934 29.237 36.506 1.00 94.51 N
ATOM 20 N1 A B 13 98.318 28.478 34.359 1.00 92.91 N
ATOM 21 C2 A B 13 98.890 27.585 33.542 1.00 95.00 C
ATOM 22 N3 A B 13 99.651 26.537 33.841 1.00 97.44 N
ATOM 23 C4 A B 13 99.818 26.438 35.172 1.00 97.27 C
ATOM 24 P A B 14 105.193 22.488 34.482 1.00132.95 P
ATOM 25 OP1 A B 14 106.076 21.307 34.307 1.00140.54 O
ATOM 26 OP2 A B 14 105.557 23.540 35.468 1.00129.05 O
ATOM 27 O5' A B 14 105.006 23.164 33.054 1.00124.55 O
TER
ATOM 2 P G A 84 108.709 26.197 34.784 1.00122.47 P
ATOM 3 OP1 G A 84 109.701 27.299 34.843 1.00116.79 O
ATOM 4 OP2 G A 84 108.433 25.397 36.000 1.00130.35 O
ATOM 5 O5' G A 84 107.325 26.812 34.297 1.00130.63 O
ATOM 6 C5' G A 84 107.142 28.216 34.209 1.00123.65 C
ATOM 7 C4' G A 84 106.493 28.571 32.895 1.00128.78 C
ATOM 8 O4' G A 84 105.187 27.936 32.791 1.00133.93 O
ATOM 9 C3' G A 84 106.205 30.048 32.734 1.00133.19 C
ATOM 10 O3' G A 84 107.376 30.719 32.298 1.00132.24 O
ATOM 11 C2' G A 84 105.071 30.039 31.718 1.00130.25 C
ATOM 12 O2' G A 84 105.510 29.826 30.392 1.00121.39 O
ATOM 13 C1' G A 84 104.258 28.836 32.204 1.00128.56 C
ATOM 14 N9 G A 84 103.294 29.209 33.236 1.00128.67 N
ATOM 15 C8 G A 84 103.115 28.605 34.459 1.00126.64 C
ATOM 16 N7 G A 84 102.208 29.191 35.192 1.00125.94 N
ATOM 17 C5 G A 84 101.753 30.240 34.403 1.00127.06 C
ATOM 18 C6 G A 84 100.770 31.227 34.665 1.00126.06 C
ATOM 19 O6 G A 84 100.085 31.381 35.682 1.00124.78 O
ATOM 20 N1 G A 84 100.620 32.097 33.590 1.00127.97 N
ATOM 21 C2 G A 84 101.326 32.029 32.413 1.00130.64 C
ATOM 22 N2 G A 84 101.039 32.965 31.492 1.00131.78 N
ATOM 23 N3 G A 84 102.245 31.113 32.157 1.00130.09 N
ATOM 24 C4 G A 84 102.406 30.257 33.188 1.00128.02 C
ATOM 25 P G A 85 108.022 31.858 33.227 1.00131.93 P
ATOM 26 OP1 G A 85 109.470 31.920 32.911 1.00134.49 O
ATOM 27 OP2 G A 85 107.590 31.603 34.624 1.00119.41 O
ATOM 28 O5' G A 85 107.331 33.192 32.695 1.00133.69 O
TER
ATOM 1 O3' C B 12 99.644 22.247 39.798 1.00108.80 O
ATOM 2 P A B 13 100.984 23.138 39.725 1.00107.84 P
ATOM 3 OP1 A B 13 102.041 22.419 40.487 1.00 89.31 O
ATOM 4 OP2 A B 13 100.623 24.534 40.102 1.00 82.81 O
ATOM 5 O5' A B 13 101.367 23.108 38.179 1.00 87.28 O
ATOM 6 C5' A B 13 101.230 21.907 37.432 1.00 89.29 C
ATOM 7 C4' A B 13 101.505 22.162 35.974 1.00100.02 C
ATOM 8 O4' A B 13 100.578 23.169 35.497 1.00109.30 O
ATOM 9 C3' A B 13 102.892 22.732 35.728 1.00112.57 C
ATOM 10 O3' A B 13 103.720 21.970 34.850 1.00121.46 O
ATOM 11 C2' A B 13 102.733 24.245 35.587 1.00106.96 C
ATOM 12 O2' A B 13 103.469 24.785 34.511 1.00112.04 O
ATOM 13 C1' A B 13 101.256 24.379 35.219 1.00106.32 C
ATOM 14 N9 A B 13 100.537 25.483 35.851 1.00 99.18 N
ATOM 15 C8 A B 13 100.416 25.796 37.180 1.00 99.20 C
ATOM 16 N7 A B 13 99.681 26.860 37.406 1.00 97.22 N
ATOM 17 C5 A B 13 99.296 27.275 36.138 1.00 94.87 C
ATOM 18 C6 A B 13 98.505 28.348 35.691 1.00 93.76 C
ATOM 19 N6 A B 13 97.934 29.237 36.506 1.00 94.51 N
ATOM 20 N1 A B 13 98.318 28.478 34.359 1.00 92.91 N
ATOM 21 C2 A B 13 98.890 27.585 33.542 1.00 95.00 C
ATOM 22 N3 A B 13 99.651 26.537 33.841 1.00 97.44 N
ATOM 23 C4 A B 13 99.818 26.438 35.172 1.00 97.27 C
ATOM 24 P A B 14 105.193 22.488 34.482 1.00132.95 P
ATOM 25 OP1 A B 14 106.076 21.307 34.307 1.00140.54 O
ATOM 26 OP2 A B 14 105.557 23.540 35.468 1.00129.05 O
ATOM 27 O5' A B 14 105.006 23.164 33.054 1.00124.55 O
TER
Atoms:
OP1: (109.701,27.299,34.843)
OP2: (108.433,25.397,36.000)
C3': (106.205,30.048,32.734)
C1': (104.258,28.836,32.204)
C5': (107.142,28.216,34.209)
O6: (100.085,31.381,35.682)
O4': (105.187,27.936,32.791)
C8: (103.115,28.605,34.459)
C2: (101.326,32.029,32.413)
C6: (100.770,31.227,34.665)
C5: (101.753,30.240,34.403)
C4: (102.406,30.257,33.188)
P: (108.709,26.197,34.784)
C4': (106.493,28.571,32.895)
C2': (105.071,30.039,31.718)
O2': (105.510,29.826,30.392)
N1: (100.620,32.097,33.590)
N2: (101.039,32.965,31.492)
N3: (102.245,31.113,32.157)
N7: (102.208,29.191,35.192)
N9: (103.294,29.209,33.236)
O5': (107.325,26.812,34.297)
O3': (107.376,30.719,32.298)
OP2: (108.433,25.397,36.000)
C3': (106.205,30.048,32.734)
C1': (104.258,28.836,32.204)
C5': (107.142,28.216,34.209)
O6: (100.085,31.381,35.682)
O4': (105.187,27.936,32.791)
C8: (103.115,28.605,34.459)
C2: (101.326,32.029,32.413)
C6: (100.770,31.227,34.665)
C5: (101.753,30.240,34.403)
C4: (102.406,30.257,33.188)
P: (108.709,26.197,34.784)
C4': (106.493,28.571,32.895)
C2': (105.071,30.039,31.718)
O2': (105.510,29.826,30.392)
N1: (100.620,32.097,33.590)
N2: (101.039,32.965,31.492)
N3: (102.245,31.113,32.157)
N7: (102.208,29.191,35.192)
N9: (103.294,29.209,33.236)
O5': (107.325,26.812,34.297)
O3': (107.376,30.719,32.298)
OP1: (102.041,22.419,40.487)
OP2: (100.623,24.534,40.102)
C3': (102.892,22.732,35.728)
C1': (101.256,24.379,35.219)
C5': (101.230,21.907,37.432)
O4': (100.578,23.169,35.497)
C8: (100.416,25.796,37.180)
O2': (103.469,24.785,34.511)
C6: (98.505,28.348,35.691)
C5: (99.296,27.275,36.138)
C4: (99.818,26.438,35.172)
P: (100.984,23.138,39.725)
C4': (101.505,22.162,35.974)
C2': (102.733,24.245,35.587)
C2: (98.890,27.585,33.542)
N1: (98.318,28.478,34.359)
N3: (99.651,26.537,33.841)
N6: (97.934,29.237,36.506)
N7: (99.681,26.860,37.406)
N9: (100.537,25.483,35.851)
O5': (101.367,23.108,38.179)
O3': (103.720,21.970,34.850)
OP2: (100.623,24.534,40.102)
C3': (102.892,22.732,35.728)
C1': (101.256,24.379,35.219)
C5': (101.230,21.907,37.432)
O4': (100.578,23.169,35.497)
C8: (100.416,25.796,37.180)
O2': (103.469,24.785,34.511)
C6: (98.505,28.348,35.691)
C5: (99.296,27.275,36.138)
C4: (99.818,26.438,35.172)
P: (100.984,23.138,39.725)
C4': (101.505,22.162,35.974)
C2': (102.733,24.245,35.587)
C2: (98.890,27.585,33.542)
N1: (98.318,28.478,34.359)
N3: (99.651,26.537,33.841)
N6: (97.934,29.237,36.506)
N7: (99.681,26.860,37.406)
N9: (100.537,25.483,35.851)
O5': (101.367,23.108,38.179)
O3': (103.720,21.970,34.850)
Image (generated by PyMOL):