Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIG:X42:X41
Extra
PDB:
ATOM 1 O3' A A 41 -1.201 51.786 6.668 1.00 21.27 O
ATOM 2 P G A 42 0.299 51.968 6.142 1.00 20.80 P
ATOM 3 OP1 G A 42 0.783 53.323 6.499 1.00 20.94 O
ATOM 4 OP2 G A 42 0.309 51.534 4.727 1.00 20.92 O
ATOM 5 O5' G A 42 1.105 50.907 7.017 1.00 21.15 O
ATOM 6 C5' G A 42 1.329 51.149 8.399 1.00 21.30 C
ATOM 7 C4' G A 42 1.474 49.828 9.126 1.00 21.06 C
ATOM 8 O4' G A 42 0.299 49.026 8.841 1.00 21.20 O
ATOM 9 C3' G A 42 2.681 49.000 8.706 1.00 21.30 C
ATOM 10 O3' G A 42 3.214 48.324 9.835 1.00 21.24 O
ATOM 11 C2' G A 42 2.097 48.026 7.681 1.00 21.03 C
ATOM 12 O2' G A 42 2.727 46.759 7.656 1.00 20.64 O
ATOM 13 C1' G A 42 0.648 47.856 8.125 1.00 21.24 C
ATOM 14 N9 G A 42 -0.218 47.689 6.960 1.00 21.24 N
ATOM 15 C8 G A 42 -1.013 48.634 6.358 1.00 21.24 C
ATOM 16 N7 G A 42 -1.659 48.193 5.314 1.00 21.67 N
ATOM 17 C5 G A 42 -1.260 46.864 5.208 1.00 21.72 C
ATOM 18 C6 G A 42 -1.623 45.864 4.266 1.00 21.93 C
ATOM 19 O6 G A 42 -2.399 45.958 3.302 1.00 21.60 O
ATOM 20 N1 G A 42 -0.992 44.651 4.524 1.00 21.90 N
ATOM 21 C2 G A 42 -0.119 44.437 5.563 1.00 21.82 C
ATOM 22 N2 G A 42 0.400 43.208 5.664 1.00 21.47 N
ATOM 23 N3 G A 42 0.234 45.358 6.445 1.00 22.02 N
ATOM 24 C4 G A 42 -0.372 46.544 6.212 1.00 21.48 C
ATOM 25 P G A 43 4.790 48.102 10.020 1.00 21.58 P
ATOM 26 OP1 G A 43 4.954 46.996 10.982 1.00 21.54 O
ATOM 27 OP2 G A 43 5.389 49.429 10.295 1.00 21.49 O
ATOM 28 O5' G A 43 5.318 47.594 8.596 1.00 21.68 O
TER
ATOM 1 O3' C B 40 -3.240 55.658 2.107 1.00 23.12 O
ATOM 2 P A B 41 -3.404 54.144 2.594 1.00 22.86 P
ATOM 3 OP1 A B 41 -2.141 53.428 2.291 1.00 22.93 O
ATOM 4 OP2 A B 41 -4.696 53.605 2.105 1.00 22.99 O
ATOM 5 O5' A B 41 -3.529 54.357 4.172 1.00 22.63 O
ATOM 6 C5' A B 41 -2.392 54.686 4.964 1.00 22.02 C
ATOM 7 C4' A B 41 -2.413 53.815 6.202 1.00 21.59 C
ATOM 8 O4' A B 41 -3.669 53.977 6.907 1.00 21.04 O
ATOM 9 C3' A B 41 -2.283 52.323 5.908 1.00 21.45 C
ATOM 10 O3' A B 41 -1.201 51.786 6.668 1.00 21.27 O
ATOM 11 C2' A B 41 -3.633 51.734 6.314 1.00 21.43 C
ATOM 12 O2' A B 41 -3.516 50.430 6.844 1.00 22.07 O
ATOM 13 C1' A B 41 -4.075 52.719 7.392 1.00 20.69 C
ATOM 14 N9 A B 41 -5.516 52.740 7.659 1.00 20.21 N
ATOM 15 C8 A B 41 -6.535 52.791 6.743 1.00 19.91 C
ATOM 16 N7 A B 41 -7.734 52.795 7.277 1.00 19.66 N
ATOM 17 C5 A B 41 -7.487 52.747 8.639 1.00 19.85 C
ATOM 18 C6 A B 41 -8.341 52.724 9.761 1.00 20.07 C
ATOM 19 N6 A B 41 -9.672 52.750 9.659 1.00 20.05 N
ATOM 20 N1 A B 41 -7.781 52.678 10.990 1.00 20.01 N
ATOM 21 C2 A B 41 -6.444 52.652 11.085 1.00 20.33 C
ATOM 22 N3 A B 41 -5.537 52.664 10.105 1.00 20.23 N
ATOM 23 C4 A B 41 -6.126 52.715 8.895 1.00 20.13 C
ATOM 24 P G B 42 0.299 51.968 6.142 1.00 20.80 P
ATOM 25 OP1 G B 42 0.783 53.323 6.499 1.00 20.94 O
ATOM 26 OP2 G B 42 0.309 51.534 4.727 1.00 20.92 O
ATOM 27 O5' G B 42 1.105 50.907 7.017 1.00 21.15 O
TER
ATOM 2 P G A 42 0.299 51.968 6.142 1.00 20.80 P
ATOM 3 OP1 G A 42 0.783 53.323 6.499 1.00 20.94 O
ATOM 4 OP2 G A 42 0.309 51.534 4.727 1.00 20.92 O
ATOM 5 O5' G A 42 1.105 50.907 7.017 1.00 21.15 O
ATOM 6 C5' G A 42 1.329 51.149 8.399 1.00 21.30 C
ATOM 7 C4' G A 42 1.474 49.828 9.126 1.00 21.06 C
ATOM 8 O4' G A 42 0.299 49.026 8.841 1.00 21.20 O
ATOM 9 C3' G A 42 2.681 49.000 8.706 1.00 21.30 C
ATOM 10 O3' G A 42 3.214 48.324 9.835 1.00 21.24 O
ATOM 11 C2' G A 42 2.097 48.026 7.681 1.00 21.03 C
ATOM 12 O2' G A 42 2.727 46.759 7.656 1.00 20.64 O
ATOM 13 C1' G A 42 0.648 47.856 8.125 1.00 21.24 C
ATOM 14 N9 G A 42 -0.218 47.689 6.960 1.00 21.24 N
ATOM 15 C8 G A 42 -1.013 48.634 6.358 1.00 21.24 C
ATOM 16 N7 G A 42 -1.659 48.193 5.314 1.00 21.67 N
ATOM 17 C5 G A 42 -1.260 46.864 5.208 1.00 21.72 C
ATOM 18 C6 G A 42 -1.623 45.864 4.266 1.00 21.93 C
ATOM 19 O6 G A 42 -2.399 45.958 3.302 1.00 21.60 O
ATOM 20 N1 G A 42 -0.992 44.651 4.524 1.00 21.90 N
ATOM 21 C2 G A 42 -0.119 44.437 5.563 1.00 21.82 C
ATOM 22 N2 G A 42 0.400 43.208 5.664 1.00 21.47 N
ATOM 23 N3 G A 42 0.234 45.358 6.445 1.00 22.02 N
ATOM 24 C4 G A 42 -0.372 46.544 6.212 1.00 21.48 C
ATOM 25 P G A 43 4.790 48.102 10.020 1.00 21.58 P
ATOM 26 OP1 G A 43 4.954 46.996 10.982 1.00 21.54 O
ATOM 27 OP2 G A 43 5.389 49.429 10.295 1.00 21.49 O
ATOM 28 O5' G A 43 5.318 47.594 8.596 1.00 21.68 O
TER
ATOM 1 O3' C B 40 -3.240 55.658 2.107 1.00 23.12 O
ATOM 2 P A B 41 -3.404 54.144 2.594 1.00 22.86 P
ATOM 3 OP1 A B 41 -2.141 53.428 2.291 1.00 22.93 O
ATOM 4 OP2 A B 41 -4.696 53.605 2.105 1.00 22.99 O
ATOM 5 O5' A B 41 -3.529 54.357 4.172 1.00 22.63 O
ATOM 6 C5' A B 41 -2.392 54.686 4.964 1.00 22.02 C
ATOM 7 C4' A B 41 -2.413 53.815 6.202 1.00 21.59 C
ATOM 8 O4' A B 41 -3.669 53.977 6.907 1.00 21.04 O
ATOM 9 C3' A B 41 -2.283 52.323 5.908 1.00 21.45 C
ATOM 10 O3' A B 41 -1.201 51.786 6.668 1.00 21.27 O
ATOM 11 C2' A B 41 -3.633 51.734 6.314 1.00 21.43 C
ATOM 12 O2' A B 41 -3.516 50.430 6.844 1.00 22.07 O
ATOM 13 C1' A B 41 -4.075 52.719 7.392 1.00 20.69 C
ATOM 14 N9 A B 41 -5.516 52.740 7.659 1.00 20.21 N
ATOM 15 C8 A B 41 -6.535 52.791 6.743 1.00 19.91 C
ATOM 16 N7 A B 41 -7.734 52.795 7.277 1.00 19.66 N
ATOM 17 C5 A B 41 -7.487 52.747 8.639 1.00 19.85 C
ATOM 18 C6 A B 41 -8.341 52.724 9.761 1.00 20.07 C
ATOM 19 N6 A B 41 -9.672 52.750 9.659 1.00 20.05 N
ATOM 20 N1 A B 41 -7.781 52.678 10.990 1.00 20.01 N
ATOM 21 C2 A B 41 -6.444 52.652 11.085 1.00 20.33 C
ATOM 22 N3 A B 41 -5.537 52.664 10.105 1.00 20.23 N
ATOM 23 C4 A B 41 -6.126 52.715 8.895 1.00 20.13 C
ATOM 24 P G B 42 0.299 51.968 6.142 1.00 20.80 P
ATOM 25 OP1 G B 42 0.783 53.323 6.499 1.00 20.94 O
ATOM 26 OP2 G B 42 0.309 51.534 4.727 1.00 20.92 O
ATOM 27 O5' G B 42 1.105 50.907 7.017 1.00 21.15 O
TER
Atoms:
OP1: (0.783,53.323,6.499)
OP2: (0.309,51.534,4.727)
C3': (2.681,49.000,8.706)
C1': (0.648,47.856,8.125)
C5': (1.329,51.149,8.399)
O6: (-2.399,45.958,3.302)
O4': (0.299,49.026,8.841)
C8: (-1.013,48.634,6.358)
C2: (-0.119,44.437,5.563)
C6: (-1.623,45.864,4.266)
C5: (-1.260,46.864,5.208)
C4: (-0.372,46.544,6.212)
P: (0.299,51.968,6.142)
C4': (1.474,49.828,9.126)
C2': (2.097,48.026,7.681)
O2': (2.727,46.759,7.656)
N1: (-0.992,44.651,4.524)
N2: (0.400,43.208,5.664)
N3: (0.234,45.358,6.445)
N7: (-1.659,48.193,5.314)
N9: (-0.218,47.689,6.960)
O5': (1.105,50.907,7.017)
O3': (3.214,48.324,9.835)
OP2: (0.309,51.534,4.727)
C3': (2.681,49.000,8.706)
C1': (0.648,47.856,8.125)
C5': (1.329,51.149,8.399)
O6: (-2.399,45.958,3.302)
O4': (0.299,49.026,8.841)
C8: (-1.013,48.634,6.358)
C2: (-0.119,44.437,5.563)
C6: (-1.623,45.864,4.266)
C5: (-1.260,46.864,5.208)
C4: (-0.372,46.544,6.212)
P: (0.299,51.968,6.142)
C4': (1.474,49.828,9.126)
C2': (2.097,48.026,7.681)
O2': (2.727,46.759,7.656)
N1: (-0.992,44.651,4.524)
N2: (0.400,43.208,5.664)
N3: (0.234,45.358,6.445)
N7: (-1.659,48.193,5.314)
N9: (-0.218,47.689,6.960)
O5': (1.105,50.907,7.017)
O3': (3.214,48.324,9.835)
OP1: (-2.141,53.428,2.291)
OP2: (-4.696,53.605,2.105)
C3': (-2.283,52.323,5.908)
C1': (-4.075,52.719,7.392)
C5': (-2.392,54.686,4.964)
O4': (-3.669,53.977,6.907)
C8: (-6.535,52.791,6.743)
O2': (-3.516,50.430,6.844)
C6: (-8.341,52.724,9.761)
C5: (-7.487,52.747,8.639)
C4: (-6.126,52.715,8.895)
P: (-3.404,54.144,2.594)
C4': (-2.413,53.815,6.202)
C2': (-3.633,51.734,6.314)
C2: (-6.444,52.652,11.085)
N1: (-7.781,52.678,10.990)
N3: (-5.537,52.664,10.105)
N6: (-9.672,52.750,9.659)
N7: (-7.734,52.795,7.277)
N9: (-5.516,52.740,7.659)
O5': (-3.529,54.357,4.172)
O3': (-1.201,51.786,6.668)
OP2: (-4.696,53.605,2.105)
C3': (-2.283,52.323,5.908)
C1': (-4.075,52.719,7.392)
C5': (-2.392,54.686,4.964)
O4': (-3.669,53.977,6.907)
C8: (-6.535,52.791,6.743)
O2': (-3.516,50.430,6.844)
C6: (-8.341,52.724,9.761)
C5: (-7.487,52.747,8.639)
C4: (-6.126,52.715,8.895)
P: (-3.404,54.144,2.594)
C4': (-2.413,53.815,6.202)
C2': (-3.633,51.734,6.314)
C2: (-6.444,52.652,11.085)
N1: (-7.781,52.678,10.990)
N3: (-5.537,52.664,10.105)
N6: (-9.672,52.750,9.659)
N7: (-7.734,52.795,7.277)
N9: (-5.516,52.740,7.659)
O5': (-3.529,54.357,4.172)
O3': (-1.201,51.786,6.668)
Image (generated by PyMOL):