Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1545:1546
Extra
PDB:
ATOM 1 O3' G A 544 113.086 -24.361 5.500 1.00 95.06 O
ATOM 2 P U A 545 113.186 -25.517 4.373 1.00136.66 P
ATOM 3 OP1 U A 545 113.790 -24.900 3.171 1.00137.15 O
ATOM 4 OP2 U A 545 111.850 -26.140 4.254 1.00136.42 O
ATOM 5 O5' U A 545 114.208 -26.548 5.022 1.00136.89 O
ATOM 6 C5' U A 545 113.853 -27.902 5.245 1.00136.93 C
ATOM 7 C4' U A 545 115.086 -28.751 5.404 1.00137.38 C
ATOM 8 O4' U A 545 116.060 -28.357 4.398 1.00137.94 O
ATOM 9 C3' U A 545 115.817 -28.604 6.739 1.00137.14 C
ATOM 10 O3' U A 545 115.338 -29.490 7.733 1.00136.83 O
ATOM 11 C2' U A 545 117.280 -28.837 6.384 1.00137.73 C
ATOM 12 O2' U A 545 117.589 -30.223 6.368 1.00138.08 O
ATOM 13 C1' U A 545 117.354 -28.299 4.956 1.00138.13 C
ATOM 14 N1 U A 545 117.818 -26.894 4.900 1.00138.06 N
ATOM 15 C2 U A 545 118.903 -26.442 5.654 1.00138.07 C
ATOM 16 O2 U A 545 119.566 -27.105 6.436 1.00138.13 O
ATOM 17 N3 U A 545 119.205 -25.119 5.466 1.00138.02 N
ATOM 18 C4 U A 545 118.568 -24.232 4.628 1.00137.97 C
ATOM 19 O4 U A 545 118.972 -23.076 4.587 1.00137.94 O
ATOM 20 C5 U A 545 117.476 -24.770 3.880 1.00137.97 C
ATOM 21 C6 U A 545 117.151 -26.052 4.035 1.00138.01 C
ATOM 22 P A A 546 114.663 -28.910 9.061 1.00117.62 P
ATOM 23 OP1 A A 546 114.144 -30.072 9.837 1.00117.43 O
ATOM 24 OP2 A A 546 113.718 -27.861 8.618 1.00117.30 O
ATOM 25 O5' A A 546 115.889 -28.243 9.838 1.00117.63 O
TER
ATOM 1 O3' U B 545 115.338 -29.490 7.733 1.00136.83 O
ATOM 2 P A B 546 114.663 -28.910 9.061 1.00117.62 P
ATOM 3 OP1 A B 546 114.144 -30.072 9.837 1.00117.43 O
ATOM 4 OP2 A B 546 113.718 -27.861 8.618 1.00117.30 O
ATOM 5 O5' A B 546 115.889 -28.243 9.838 1.00117.63 O
ATOM 6 C5' A B 546 116.928 -29.039 10.407 1.00117.91 C
ATOM 7 C4' A B 546 118.271 -28.342 10.323 1.00118.23 C
ATOM 8 O4' A B 546 118.349 -27.575 9.097 1.00118.50 O
ATOM 9 C3' A B 546 118.580 -27.351 11.443 1.00117.83 C
ATOM 10 O3' A B 546 119.222 -27.977 12.542 1.00117.82 O
ATOM 11 C2' A B 546 119.446 -26.273 10.781 1.00118.12 C
ATOM 12 O2' A B 546 120.821 -26.553 10.966 1.00118.55 O
ATOM 13 C1' A B 546 119.116 -26.414 9.289 1.00118.49 C
ATOM 14 N9 A B 546 118.378 -25.258 8.738 1.00118.25 N
ATOM 15 C8 A B 546 117.044 -25.190 8.389 1.00117.94 C
ATOM 16 N7 A B 546 116.675 -24.031 7.882 1.00117.82 N
ATOM 17 C5 A B 546 117.848 -23.274 7.879 1.00118.07 C
ATOM 18 C6 A B 546 118.133 -21.943 7.463 1.00118.11 C
ATOM 19 N6 A B 546 117.235 -21.088 6.948 1.00117.89 N
ATOM 20 N1 A B 546 119.412 -21.513 7.606 1.00118.40 N
ATOM 21 C2 A B 546 120.327 -22.360 8.121 1.00118.64 C
ATOM 22 N3 A B 546 120.188 -23.620 8.543 1.00118.64 N
ATOM 23 C4 A B 546 118.909 -24.027 8.396 1.00118.34 C
ATOM 24 P A B 547 118.644 -27.809 14.035 1.00122.52 P
ATOM 25 OP1 A B 547 118.754 -29.137 14.704 1.00122.60 O
ATOM 26 OP2 A B 547 117.302 -27.168 13.920 1.00122.03 O
ATOM 27 O5' A B 547 119.669 -26.790 14.698 1.00122.50 O
TER
ATOM 2 P U A 545 113.186 -25.517 4.373 1.00136.66 P
ATOM 3 OP1 U A 545 113.790 -24.900 3.171 1.00137.15 O
ATOM 4 OP2 U A 545 111.850 -26.140 4.254 1.00136.42 O
ATOM 5 O5' U A 545 114.208 -26.548 5.022 1.00136.89 O
ATOM 6 C5' U A 545 113.853 -27.902 5.245 1.00136.93 C
ATOM 7 C4' U A 545 115.086 -28.751 5.404 1.00137.38 C
ATOM 8 O4' U A 545 116.060 -28.357 4.398 1.00137.94 O
ATOM 9 C3' U A 545 115.817 -28.604 6.739 1.00137.14 C
ATOM 10 O3' U A 545 115.338 -29.490 7.733 1.00136.83 O
ATOM 11 C2' U A 545 117.280 -28.837 6.384 1.00137.73 C
ATOM 12 O2' U A 545 117.589 -30.223 6.368 1.00138.08 O
ATOM 13 C1' U A 545 117.354 -28.299 4.956 1.00138.13 C
ATOM 14 N1 U A 545 117.818 -26.894 4.900 1.00138.06 N
ATOM 15 C2 U A 545 118.903 -26.442 5.654 1.00138.07 C
ATOM 16 O2 U A 545 119.566 -27.105 6.436 1.00138.13 O
ATOM 17 N3 U A 545 119.205 -25.119 5.466 1.00138.02 N
ATOM 18 C4 U A 545 118.568 -24.232 4.628 1.00137.97 C
ATOM 19 O4 U A 545 118.972 -23.076 4.587 1.00137.94 O
ATOM 20 C5 U A 545 117.476 -24.770 3.880 1.00137.97 C
ATOM 21 C6 U A 545 117.151 -26.052 4.035 1.00138.01 C
ATOM 22 P A A 546 114.663 -28.910 9.061 1.00117.62 P
ATOM 23 OP1 A A 546 114.144 -30.072 9.837 1.00117.43 O
ATOM 24 OP2 A A 546 113.718 -27.861 8.618 1.00117.30 O
ATOM 25 O5' A A 546 115.889 -28.243 9.838 1.00117.63 O
TER
ATOM 1 O3' U B 545 115.338 -29.490 7.733 1.00136.83 O
ATOM 2 P A B 546 114.663 -28.910 9.061 1.00117.62 P
ATOM 3 OP1 A B 546 114.144 -30.072 9.837 1.00117.43 O
ATOM 4 OP2 A B 546 113.718 -27.861 8.618 1.00117.30 O
ATOM 5 O5' A B 546 115.889 -28.243 9.838 1.00117.63 O
ATOM 6 C5' A B 546 116.928 -29.039 10.407 1.00117.91 C
ATOM 7 C4' A B 546 118.271 -28.342 10.323 1.00118.23 C
ATOM 8 O4' A B 546 118.349 -27.575 9.097 1.00118.50 O
ATOM 9 C3' A B 546 118.580 -27.351 11.443 1.00117.83 C
ATOM 10 O3' A B 546 119.222 -27.977 12.542 1.00117.82 O
ATOM 11 C2' A B 546 119.446 -26.273 10.781 1.00118.12 C
ATOM 12 O2' A B 546 120.821 -26.553 10.966 1.00118.55 O
ATOM 13 C1' A B 546 119.116 -26.414 9.289 1.00118.49 C
ATOM 14 N9 A B 546 118.378 -25.258 8.738 1.00118.25 N
ATOM 15 C8 A B 546 117.044 -25.190 8.389 1.00117.94 C
ATOM 16 N7 A B 546 116.675 -24.031 7.882 1.00117.82 N
ATOM 17 C5 A B 546 117.848 -23.274 7.879 1.00118.07 C
ATOM 18 C6 A B 546 118.133 -21.943 7.463 1.00118.11 C
ATOM 19 N6 A B 546 117.235 -21.088 6.948 1.00117.89 N
ATOM 20 N1 A B 546 119.412 -21.513 7.606 1.00118.40 N
ATOM 21 C2 A B 546 120.327 -22.360 8.121 1.00118.64 C
ATOM 22 N3 A B 546 120.188 -23.620 8.543 1.00118.64 N
ATOM 23 C4 A B 546 118.909 -24.027 8.396 1.00118.34 C
ATOM 24 P A B 547 118.644 -27.809 14.035 1.00122.52 P
ATOM 25 OP1 A B 547 118.754 -29.137 14.704 1.00122.60 O
ATOM 26 OP2 A B 547 117.302 -27.168 13.920 1.00122.03 O
ATOM 27 O5' A B 547 119.669 -26.790 14.698 1.00122.50 O
TER
Atoms:
C4: (118.568,-24.232,4.628)
N3: (119.205,-25.119,5.466)
OP1: (113.790,-24.900,3.171)
OP2: (111.850,-26.140,4.254)
C2: (118.903,-26.442,5.654)
C1': (117.354,-28.299,4.956)
C3': (115.817,-28.604,6.739)
O5': (114.208,-26.548,5.022)
O4': (116.060,-28.357,4.398)
C5': (113.853,-27.902,5.245)
P: (113.186,-25.517,4.373)
C4': (115.086,-28.751,5.404)
C2': (117.280,-28.837,6.384)
O2': (117.589,-30.223,6.368)
N1: (117.818,-26.894,4.900)
O4: (118.972,-23.076,4.587)
O2: (119.566,-27.105,6.436)
C6: (117.151,-26.052,4.035)
C5: (117.476,-24.770,3.880)
O3': (115.338,-29.490,7.733)
N3: (119.205,-25.119,5.466)
OP1: (113.790,-24.900,3.171)
OP2: (111.850,-26.140,4.254)
C2: (118.903,-26.442,5.654)
C1': (117.354,-28.299,4.956)
C3': (115.817,-28.604,6.739)
O5': (114.208,-26.548,5.022)
O4': (116.060,-28.357,4.398)
C5': (113.853,-27.902,5.245)
P: (113.186,-25.517,4.373)
C4': (115.086,-28.751,5.404)
C2': (117.280,-28.837,6.384)
O2': (117.589,-30.223,6.368)
N1: (117.818,-26.894,4.900)
O4: (118.972,-23.076,4.587)
O2: (119.566,-27.105,6.436)
C6: (117.151,-26.052,4.035)
C5: (117.476,-24.770,3.880)
O3': (115.338,-29.490,7.733)
OP1: (114.144,-30.072,9.837)
OP2: (113.718,-27.861,8.618)
C3': (118.580,-27.351,11.443)
C1': (119.116,-26.414,9.289)
C5': (116.928,-29.039,10.407)
O4': (118.349,-27.575,9.097)
C8: (117.044,-25.190,8.389)
O2': (120.821,-26.553,10.966)
C6: (118.133,-21.943,7.463)
C5: (117.848,-23.274,7.879)
C4: (118.909,-24.027,8.396)
P: (114.663,-28.910,9.061)
C4': (118.271,-28.342,10.323)
C2': (119.446,-26.273,10.781)
C2: (120.327,-22.360,8.121)
N1: (119.412,-21.513,7.606)
N3: (120.188,-23.620,8.543)
N6: (117.235,-21.088,6.948)
N7: (116.675,-24.031,7.882)
N9: (118.378,-25.258,8.738)
O5': (115.889,-28.243,9.838)
O3': (119.222,-27.977,12.542)
OP2: (113.718,-27.861,8.618)
C3': (118.580,-27.351,11.443)
C1': (119.116,-26.414,9.289)
C5': (116.928,-29.039,10.407)
O4': (118.349,-27.575,9.097)
C8: (117.044,-25.190,8.389)
O2': (120.821,-26.553,10.966)
C6: (118.133,-21.943,7.463)
C5: (117.848,-23.274,7.879)
C4: (118.909,-24.027,8.396)
P: (114.663,-28.910,9.061)
C4': (118.271,-28.342,10.323)
C2': (119.446,-26.273,10.781)
C2: (120.327,-22.360,8.121)
N1: (119.412,-21.513,7.606)
N3: (120.188,-23.620,8.543)
N6: (117.235,-21.088,6.948)
N7: (116.675,-24.031,7.882)
N9: (118.378,-25.258,8.738)
O5': (115.889,-28.243,9.838)
O3': (119.222,-27.977,12.542)
Image (generated by PyMOL):