Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01394:01351
Extra
PDB:
ATOM 1 O3' A A1393 47.192 174.462 77.008 1.00 39.92 O
ATOM 2 P U A1394 47.103 174.415 75.405 1.00 41.50 P
ATOM 3 OP1 U A1394 45.666 174.628 75.089 1.00 41.14 O
ATOM 4 OP2 U A1394 47.822 173.247 74.828 1.00 40.30 O
ATOM 5 O5' U A1394 47.901 175.716 74.969 1.00 40.54 O
ATOM 6 C5' U A1394 47.639 176.366 73.719 1.00 39.81 C
ATOM 7 C4' U A1394 48.111 177.791 73.791 1.00 38.36 C
ATOM 8 O4' U A1394 47.301 178.500 74.768 1.00 38.81 O
ATOM 9 C3' U A1394 49.553 177.957 74.248 1.00 38.49 C
ATOM 10 O3' U A1394 50.119 179.064 73.588 1.00 35.96 O
ATOM 11 C2' U A1394 49.413 178.203 75.746 1.00 38.91 C
ATOM 12 O2' U A1394 50.491 178.920 76.315 1.00 39.45 O
ATOM 13 C1' U A1394 48.122 179.011 75.797 1.00 38.27 C
ATOM 14 N1 U A1394 47.382 178.879 77.059 1.00 40.60 N
ATOM 15 C2 U A1394 46.865 180.029 77.620 1.00 41.93 C
ATOM 16 O2 U A1394 47.019 181.136 77.125 1.00 42.85 O
ATOM 17 N3 U A1394 46.162 179.835 78.784 1.00 40.43 N
ATOM 18 C4 U A1394 45.932 178.635 79.424 1.00 40.05 C
ATOM 19 O4 U A1394 45.219 178.612 80.423 1.00 43.04 O
ATOM 20 C5 U A1394 46.509 177.499 78.789 1.00 38.24 C
ATOM 21 C6 U A1394 47.196 177.652 77.660 1.00 40.06 C
ATOM 22 P C A1395 51.181 178.805 72.428 1.00 40.84 P
ATOM 23 OP1 C A1395 51.676 180.120 71.924 1.00 41.81 O
ATOM 24 OP2 C A1395 50.569 177.839 71.479 1.00 39.21 O
ATOM 25 O5' C A1395 52.366 178.057 73.184 1.00 40.16 O
TER
ATOM 1 O3' G B1350 41.795 179.077 84.049 1.00 47.59 O
ATOM 2 P A B1351 42.807 180.047 84.855 1.00 49.50 P
ATOM 3 OP1 A B1351 42.619 179.739 86.295 1.00 47.85 O
ATOM 4 OP2 A B1351 42.657 181.453 84.382 1.00 49.48 O
ATOM 5 O5' A B1351 44.256 179.534 84.430 1.00 48.78 O
ATOM 6 C5' A B1351 44.563 178.134 84.436 1.00 45.44 C
ATOM 7 C4' A B1351 46.048 177.916 84.562 1.00 44.72 C
ATOM 8 O4' A B1351 46.700 178.264 83.308 1.00 44.09 O
ATOM 9 C3' A B1351 46.759 178.711 85.657 1.00 44.27 C
ATOM 10 O3' A B1351 47.690 177.870 86.322 1.00 47.09 O
ATOM 11 C2' A B1351 47.518 179.775 84.866 1.00 44.10 C
ATOM 12 O2' A B1351 48.713 180.182 85.498 1.00 42.69 O
ATOM 13 C1' A B1351 47.861 179.011 83.592 1.00 44.25 C
ATOM 14 N9 A B1351 48.217 179.822 82.421 1.00 44.05 N
ATOM 15 C8 A B1351 47.935 181.143 82.163 1.00 42.91 C
ATOM 16 N7 A B1351 48.411 181.573 81.020 1.00 41.99 N
ATOM 17 C5 A B1351 49.045 180.462 80.482 1.00 42.25 C
ATOM 18 C6 A B1351 49.754 180.261 79.283 1.00 41.98 C
ATOM 19 N6 A B1351 49.948 181.208 78.366 1.00 41.41 N
ATOM 20 N1 A B1351 50.269 179.034 79.055 1.00 41.80 N
ATOM 21 C2 A B1351 50.086 178.083 79.975 1.00 40.79 C
ATOM 22 N3 A B1351 49.444 178.148 81.137 1.00 41.69 N
ATOM 23 C4 A B1351 48.937 179.378 81.334 1.00 43.18 C
ATOM 24 P A B1352 47.302 177.234 87.745 1.00 49.11 P
ATOM 25 OP1 A B1352 46.729 175.888 87.496 1.00 49.25 O
ATOM 26 OP2 A B1352 46.518 178.237 88.508 1.00 48.22 O
ATOM 27 O5' A B1352 48.695 177.035 88.483 1.00 47.99 O
TER
ATOM 2 P U A1394 47.103 174.415 75.405 1.00 41.50 P
ATOM 3 OP1 U A1394 45.666 174.628 75.089 1.00 41.14 O
ATOM 4 OP2 U A1394 47.822 173.247 74.828 1.00 40.30 O
ATOM 5 O5' U A1394 47.901 175.716 74.969 1.00 40.54 O
ATOM 6 C5' U A1394 47.639 176.366 73.719 1.00 39.81 C
ATOM 7 C4' U A1394 48.111 177.791 73.791 1.00 38.36 C
ATOM 8 O4' U A1394 47.301 178.500 74.768 1.00 38.81 O
ATOM 9 C3' U A1394 49.553 177.957 74.248 1.00 38.49 C
ATOM 10 O3' U A1394 50.119 179.064 73.588 1.00 35.96 O
ATOM 11 C2' U A1394 49.413 178.203 75.746 1.00 38.91 C
ATOM 12 O2' U A1394 50.491 178.920 76.315 1.00 39.45 O
ATOM 13 C1' U A1394 48.122 179.011 75.797 1.00 38.27 C
ATOM 14 N1 U A1394 47.382 178.879 77.059 1.00 40.60 N
ATOM 15 C2 U A1394 46.865 180.029 77.620 1.00 41.93 C
ATOM 16 O2 U A1394 47.019 181.136 77.125 1.00 42.85 O
ATOM 17 N3 U A1394 46.162 179.835 78.784 1.00 40.43 N
ATOM 18 C4 U A1394 45.932 178.635 79.424 1.00 40.05 C
ATOM 19 O4 U A1394 45.219 178.612 80.423 1.00 43.04 O
ATOM 20 C5 U A1394 46.509 177.499 78.789 1.00 38.24 C
ATOM 21 C6 U A1394 47.196 177.652 77.660 1.00 40.06 C
ATOM 22 P C A1395 51.181 178.805 72.428 1.00 40.84 P
ATOM 23 OP1 C A1395 51.676 180.120 71.924 1.00 41.81 O
ATOM 24 OP2 C A1395 50.569 177.839 71.479 1.00 39.21 O
ATOM 25 O5' C A1395 52.366 178.057 73.184 1.00 40.16 O
TER
ATOM 1 O3' G B1350 41.795 179.077 84.049 1.00 47.59 O
ATOM 2 P A B1351 42.807 180.047 84.855 1.00 49.50 P
ATOM 3 OP1 A B1351 42.619 179.739 86.295 1.00 47.85 O
ATOM 4 OP2 A B1351 42.657 181.453 84.382 1.00 49.48 O
ATOM 5 O5' A B1351 44.256 179.534 84.430 1.00 48.78 O
ATOM 6 C5' A B1351 44.563 178.134 84.436 1.00 45.44 C
ATOM 7 C4' A B1351 46.048 177.916 84.562 1.00 44.72 C
ATOM 8 O4' A B1351 46.700 178.264 83.308 1.00 44.09 O
ATOM 9 C3' A B1351 46.759 178.711 85.657 1.00 44.27 C
ATOM 10 O3' A B1351 47.690 177.870 86.322 1.00 47.09 O
ATOM 11 C2' A B1351 47.518 179.775 84.866 1.00 44.10 C
ATOM 12 O2' A B1351 48.713 180.182 85.498 1.00 42.69 O
ATOM 13 C1' A B1351 47.861 179.011 83.592 1.00 44.25 C
ATOM 14 N9 A B1351 48.217 179.822 82.421 1.00 44.05 N
ATOM 15 C8 A B1351 47.935 181.143 82.163 1.00 42.91 C
ATOM 16 N7 A B1351 48.411 181.573 81.020 1.00 41.99 N
ATOM 17 C5 A B1351 49.045 180.462 80.482 1.00 42.25 C
ATOM 18 C6 A B1351 49.754 180.261 79.283 1.00 41.98 C
ATOM 19 N6 A B1351 49.948 181.208 78.366 1.00 41.41 N
ATOM 20 N1 A B1351 50.269 179.034 79.055 1.00 41.80 N
ATOM 21 C2 A B1351 50.086 178.083 79.975 1.00 40.79 C
ATOM 22 N3 A B1351 49.444 178.148 81.137 1.00 41.69 N
ATOM 23 C4 A B1351 48.937 179.378 81.334 1.00 43.18 C
ATOM 24 P A B1352 47.302 177.234 87.745 1.00 49.11 P
ATOM 25 OP1 A B1352 46.729 175.888 87.496 1.00 49.25 O
ATOM 26 OP2 A B1352 46.518 178.237 88.508 1.00 48.22 O
ATOM 27 O5' A B1352 48.695 177.035 88.483 1.00 47.99 O
TER
Atoms:
C4: (45.932,178.635,79.424)
N3: (46.162,179.835,78.784)
OP1: (45.666,174.628,75.089)
OP2: (47.822,173.247,74.828)
C2: (46.865,180.029,77.620)
C1': (48.122,179.011,75.797)
C3': (49.553,177.957,74.248)
O5': (47.901,175.716,74.969)
O4': (47.301,178.500,74.768)
C5': (47.639,176.366,73.719)
P: (47.103,174.415,75.405)
C4': (48.111,177.791,73.791)
C2': (49.413,178.203,75.746)
O2': (50.491,178.920,76.315)
N1: (47.382,178.879,77.059)
O4: (45.219,178.612,80.423)
O2: (47.019,181.136,77.125)
C6: (47.196,177.652,77.660)
C5: (46.509,177.499,78.789)
O3': (50.119,179.064,73.588)
N3: (46.162,179.835,78.784)
OP1: (45.666,174.628,75.089)
OP2: (47.822,173.247,74.828)
C2: (46.865,180.029,77.620)
C1': (48.122,179.011,75.797)
C3': (49.553,177.957,74.248)
O5': (47.901,175.716,74.969)
O4': (47.301,178.500,74.768)
C5': (47.639,176.366,73.719)
P: (47.103,174.415,75.405)
C4': (48.111,177.791,73.791)
C2': (49.413,178.203,75.746)
O2': (50.491,178.920,76.315)
N1: (47.382,178.879,77.059)
O4: (45.219,178.612,80.423)
O2: (47.019,181.136,77.125)
C6: (47.196,177.652,77.660)
C5: (46.509,177.499,78.789)
O3': (50.119,179.064,73.588)
OP1: (42.619,179.739,86.295)
OP2: (42.657,181.453,84.382)
C3': (46.759,178.711,85.657)
C1': (47.861,179.011,83.592)
C5': (44.563,178.134,84.436)
O4': (46.700,178.264,83.308)
C8: (47.935,181.143,82.163)
O2': (48.713,180.182,85.498)
C6: (49.754,180.261,79.283)
C5: (49.045,180.462,80.482)
C4: (48.937,179.378,81.334)
P: (42.807,180.047,84.855)
C4': (46.048,177.916,84.562)
C2': (47.518,179.775,84.866)
C2: (50.086,178.083,79.975)
N1: (50.269,179.034,79.055)
N3: (49.444,178.148,81.137)
N6: (49.948,181.208,78.366)
N7: (48.411,181.573,81.020)
N9: (48.217,179.822,82.421)
O5': (44.256,179.534,84.430)
O3': (47.690,177.870,86.322)
OP2: (42.657,181.453,84.382)
C3': (46.759,178.711,85.657)
C1': (47.861,179.011,83.592)
C5': (44.563,178.134,84.436)
O4': (46.700,178.264,83.308)
C8: (47.935,181.143,82.163)
O2': (48.713,180.182,85.498)
C6: (49.754,180.261,79.283)
C5: (49.045,180.462,80.482)
C4: (48.937,179.378,81.334)
P: (42.807,180.047,84.855)
C4': (46.048,177.916,84.562)
C2': (47.518,179.775,84.866)
C2: (50.086,178.083,79.975)
N1: (50.269,179.034,79.055)
N3: (49.444,178.148,81.137)
N6: (49.948,181.208,78.366)
N7: (48.411,181.573,81.020)
N9: (48.217,179.822,82.421)
O5': (44.256,179.534,84.430)
O3': (47.690,177.870,86.322)
Image (generated by PyMOL):