Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1496:1495
Extra
PDB:
ATOM 1 O3' A A 495 33.937 1.887 -38.815 1.00195.93 O
ATOM 2 P G A 496 34.197 0.342 -38.428 1.00144.45 P
ATOM 3 OP1 G A 496 32.953 -0.410 -38.771 1.00144.81 O
ATOM 4 OP2 G A 496 34.686 0.312 -37.013 1.00143.47 O
ATOM 5 O5' G A 496 35.387 -0.059 -39.425 1.00144.97 O
ATOM 6 C5' G A 496 35.386 -1.295 -40.110 1.00145.40 C
ATOM 7 C4' G A 496 35.635 -1.115 -41.586 1.00146.37 C
ATOM 8 O4' G A 496 36.171 0.204 -41.850 1.00146.52 O
ATOM 9 C3' G A 496 36.662 -2.044 -42.200 1.00146.67 C
ATOM 10 O3' G A 496 36.161 -3.341 -42.431 1.00146.88 O
ATOM 11 C2' G A 496 37.062 -1.301 -43.467 1.00147.50 C
ATOM 12 O2' G A 496 36.086 -1.467 -44.484 1.00148.31 O
ATOM 13 C1' G A 496 37.014 0.150 -42.988 1.00147.20 C
ATOM 14 N9 G A 496 38.351 0.664 -42.626 1.00146.82 N
ATOM 15 C8 G A 496 38.729 1.209 -41.426 1.00145.98 C
ATOM 16 N7 G A 496 39.974 1.600 -41.397 1.00145.85 N
ATOM 17 C5 G A 496 40.457 1.292 -42.656 1.00146.65 C
ATOM 18 C6 G A 496 41.753 1.482 -43.201 1.00146.91 C
ATOM 19 O6 G A 496 42.759 1.970 -42.671 1.00146.47 O
ATOM 20 N1 G A 496 41.807 1.027 -44.512 1.00147.79 N
ATOM 21 C2 G A 496 40.764 0.465 -45.201 1.00148.36 C
ATOM 22 N2 G A 496 41.032 0.084 -46.454 1.00149.20 N
ATOM 23 N3 G A 496 39.555 0.283 -44.705 1.00148.12 N
ATOM 24 C4 G A 496 39.468 0.716 -43.432 1.00147.26 C
ATOM 25 P U A 497 36.463 -4.518 -41.382 1.00124.39 P
ATOM 26 OP1 U A 497 35.306 -5.438 -41.423 1.00124.56 O
ATOM 27 OP2 U A 497 36.827 -3.883 -40.085 1.00123.47 O
ATOM 28 O5' U A 497 37.737 -5.227 -42.016 1.00124.70 O
TER
ATOM 1 O3' A B 494 36.964 7.110 -35.834 1.00189.38 O
ATOM 2 P A B 495 36.498 5.619 -36.232 1.00194.12 P
ATOM 3 OP1 A B 495 35.627 5.128 -35.137 1.00193.49 O
ATOM 4 OP2 A B 495 37.724 4.852 -36.569 1.00194.17 O
ATOM 5 O5' A B 495 35.631 5.860 -37.544 1.00195.08 O
ATOM 6 C5' A B 495 34.299 5.385 -37.657 1.00195.28 C
ATOM 7 C4' A B 495 34.207 4.293 -38.684 1.00195.91 C
ATOM 8 O4' A B 495 35.047 4.651 -39.830 1.00196.59 O
ATOM 9 C3' A B 495 34.707 2.927 -38.203 1.00195.47 C
ATOM 10 O3' A B 495 33.937 1.887 -38.815 1.00195.93 O
ATOM 11 C2' A B 495 36.139 2.905 -38.731 1.00195.66 C
ATOM 12 O2' A B 495 36.722 1.626 -38.875 1.00195.64 O
ATOM 13 C1' A B 495 35.974 3.611 -40.067 1.00196.59 C
ATOM 14 N9 A B 495 37.226 4.166 -40.579 1.00196.82 N
ATOM 15 C8 A B 495 38.215 4.803 -39.868 1.00196.27 C
ATOM 16 N7 A B 495 39.265 5.110 -40.591 1.00196.66 N
ATOM 17 C5 A B 495 38.960 4.605 -41.849 1.00197.52 C
ATOM 18 C6 A B 495 39.657 4.597 -43.067 1.00198.27 C
ATOM 19 N6 A B 495 40.867 5.122 -43.234 1.00198.30 N
ATOM 20 N1 A B 495 39.069 4.010 -44.131 1.00199.04 N
ATOM 21 C2 A B 495 37.855 3.471 -43.974 1.00199.03 C
ATOM 22 N3 A B 495 37.098 3.413 -42.883 1.00198.36 N
ATOM 23 C4 A B 495 37.712 4.011 -41.850 1.00197.62 C
ATOM 24 P G B 496 34.197 0.342 -38.428 1.00144.45 P
ATOM 25 OP1 G B 496 32.953 -0.410 -38.771 1.00144.81 O
ATOM 26 OP2 G B 496 34.686 0.312 -37.013 1.00143.47 O
ATOM 27 O5' G B 496 35.387 -0.059 -39.425 1.00144.97 O
TER
ATOM 2 P G A 496 34.197 0.342 -38.428 1.00144.45 P
ATOM 3 OP1 G A 496 32.953 -0.410 -38.771 1.00144.81 O
ATOM 4 OP2 G A 496 34.686 0.312 -37.013 1.00143.47 O
ATOM 5 O5' G A 496 35.387 -0.059 -39.425 1.00144.97 O
ATOM 6 C5' G A 496 35.386 -1.295 -40.110 1.00145.40 C
ATOM 7 C4' G A 496 35.635 -1.115 -41.586 1.00146.37 C
ATOM 8 O4' G A 496 36.171 0.204 -41.850 1.00146.52 O
ATOM 9 C3' G A 496 36.662 -2.044 -42.200 1.00146.67 C
ATOM 10 O3' G A 496 36.161 -3.341 -42.431 1.00146.88 O
ATOM 11 C2' G A 496 37.062 -1.301 -43.467 1.00147.50 C
ATOM 12 O2' G A 496 36.086 -1.467 -44.484 1.00148.31 O
ATOM 13 C1' G A 496 37.014 0.150 -42.988 1.00147.20 C
ATOM 14 N9 G A 496 38.351 0.664 -42.626 1.00146.82 N
ATOM 15 C8 G A 496 38.729 1.209 -41.426 1.00145.98 C
ATOM 16 N7 G A 496 39.974 1.600 -41.397 1.00145.85 N
ATOM 17 C5 G A 496 40.457 1.292 -42.656 1.00146.65 C
ATOM 18 C6 G A 496 41.753 1.482 -43.201 1.00146.91 C
ATOM 19 O6 G A 496 42.759 1.970 -42.671 1.00146.47 O
ATOM 20 N1 G A 496 41.807 1.027 -44.512 1.00147.79 N
ATOM 21 C2 G A 496 40.764 0.465 -45.201 1.00148.36 C
ATOM 22 N2 G A 496 41.032 0.084 -46.454 1.00149.20 N
ATOM 23 N3 G A 496 39.555 0.283 -44.705 1.00148.12 N
ATOM 24 C4 G A 496 39.468 0.716 -43.432 1.00147.26 C
ATOM 25 P U A 497 36.463 -4.518 -41.382 1.00124.39 P
ATOM 26 OP1 U A 497 35.306 -5.438 -41.423 1.00124.56 O
ATOM 27 OP2 U A 497 36.827 -3.883 -40.085 1.00123.47 O
ATOM 28 O5' U A 497 37.737 -5.227 -42.016 1.00124.70 O
TER
ATOM 1 O3' A B 494 36.964 7.110 -35.834 1.00189.38 O
ATOM 2 P A B 495 36.498 5.619 -36.232 1.00194.12 P
ATOM 3 OP1 A B 495 35.627 5.128 -35.137 1.00193.49 O
ATOM 4 OP2 A B 495 37.724 4.852 -36.569 1.00194.17 O
ATOM 5 O5' A B 495 35.631 5.860 -37.544 1.00195.08 O
ATOM 6 C5' A B 495 34.299 5.385 -37.657 1.00195.28 C
ATOM 7 C4' A B 495 34.207 4.293 -38.684 1.00195.91 C
ATOM 8 O4' A B 495 35.047 4.651 -39.830 1.00196.59 O
ATOM 9 C3' A B 495 34.707 2.927 -38.203 1.00195.47 C
ATOM 10 O3' A B 495 33.937 1.887 -38.815 1.00195.93 O
ATOM 11 C2' A B 495 36.139 2.905 -38.731 1.00195.66 C
ATOM 12 O2' A B 495 36.722 1.626 -38.875 1.00195.64 O
ATOM 13 C1' A B 495 35.974 3.611 -40.067 1.00196.59 C
ATOM 14 N9 A B 495 37.226 4.166 -40.579 1.00196.82 N
ATOM 15 C8 A B 495 38.215 4.803 -39.868 1.00196.27 C
ATOM 16 N7 A B 495 39.265 5.110 -40.591 1.00196.66 N
ATOM 17 C5 A B 495 38.960 4.605 -41.849 1.00197.52 C
ATOM 18 C6 A B 495 39.657 4.597 -43.067 1.00198.27 C
ATOM 19 N6 A B 495 40.867 5.122 -43.234 1.00198.30 N
ATOM 20 N1 A B 495 39.069 4.010 -44.131 1.00199.04 N
ATOM 21 C2 A B 495 37.855 3.471 -43.974 1.00199.03 C
ATOM 22 N3 A B 495 37.098 3.413 -42.883 1.00198.36 N
ATOM 23 C4 A B 495 37.712 4.011 -41.850 1.00197.62 C
ATOM 24 P G B 496 34.197 0.342 -38.428 1.00144.45 P
ATOM 25 OP1 G B 496 32.953 -0.410 -38.771 1.00144.81 O
ATOM 26 OP2 G B 496 34.686 0.312 -37.013 1.00143.47 O
ATOM 27 O5' G B 496 35.387 -0.059 -39.425 1.00144.97 O
TER
Atoms:
OP1: (32.953,-0.410,-38.771)
OP2: (34.686,0.312,-37.013)
C3': (36.662,-2.044,-42.200)
C1': (37.014,0.150,-42.988)
C5': (35.386,-1.295,-40.110)
O6: (42.759,1.970,-42.671)
O4': (36.171,0.204,-41.850)
C8: (38.729,1.209,-41.426)
C2: (40.764,0.465,-45.201)
C6: (41.753,1.482,-43.201)
C5: (40.457,1.292,-42.656)
C4: (39.468,0.716,-43.432)
P: (34.197,0.342,-38.428)
C4': (35.635,-1.115,-41.586)
C2': (37.062,-1.301,-43.467)
O2': (36.086,-1.467,-44.484)
N1: (41.807,1.027,-44.512)
N2: (41.032,0.084,-46.454)
N3: (39.555,0.283,-44.705)
N7: (39.974,1.600,-41.397)
N9: (38.351,0.664,-42.626)
O5': (35.387,-0.059,-39.425)
O3': (36.161,-3.341,-42.431)
OP2: (34.686,0.312,-37.013)
C3': (36.662,-2.044,-42.200)
C1': (37.014,0.150,-42.988)
C5': (35.386,-1.295,-40.110)
O6: (42.759,1.970,-42.671)
O4': (36.171,0.204,-41.850)
C8: (38.729,1.209,-41.426)
C2: (40.764,0.465,-45.201)
C6: (41.753,1.482,-43.201)
C5: (40.457,1.292,-42.656)
C4: (39.468,0.716,-43.432)
P: (34.197,0.342,-38.428)
C4': (35.635,-1.115,-41.586)
C2': (37.062,-1.301,-43.467)
O2': (36.086,-1.467,-44.484)
N1: (41.807,1.027,-44.512)
N2: (41.032,0.084,-46.454)
N3: (39.555,0.283,-44.705)
N7: (39.974,1.600,-41.397)
N9: (38.351,0.664,-42.626)
O5': (35.387,-0.059,-39.425)
O3': (36.161,-3.341,-42.431)
OP1: (35.627,5.128,-35.137)
OP2: (37.724,4.852,-36.569)
C3': (34.707,2.927,-38.203)
C1': (35.974,3.611,-40.067)
C5': (34.299,5.385,-37.657)
O4': (35.047,4.651,-39.830)
C8: (38.215,4.803,-39.868)
O2': (36.722,1.626,-38.875)
C6: (39.657,4.597,-43.067)
C5: (38.960,4.605,-41.849)
C4: (37.712,4.011,-41.850)
P: (36.498,5.619,-36.232)
C4': (34.207,4.293,-38.684)
C2': (36.139,2.905,-38.731)
C2: (37.855,3.471,-43.974)
N1: (39.069,4.010,-44.131)
N3: (37.098,3.413,-42.883)
N6: (40.867,5.122,-43.234)
N7: (39.265,5.110,-40.591)
N9: (37.226,4.166,-40.579)
O5': (35.631,5.860,-37.544)
O3': (33.937,1.887,-38.815)
OP2: (37.724,4.852,-36.569)
C3': (34.707,2.927,-38.203)
C1': (35.974,3.611,-40.067)
C5': (34.299,5.385,-37.657)
O4': (35.047,4.651,-39.830)
C8: (38.215,4.803,-39.868)
O2': (36.722,1.626,-38.875)
C6: (39.657,4.597,-43.067)
C5: (38.960,4.605,-41.849)
C4: (37.712,4.011,-41.850)
P: (36.498,5.619,-36.232)
C4': (34.207,4.293,-38.684)
C2': (36.139,2.905,-38.731)
C2: (37.855,3.471,-43.974)
N1: (39.069,4.010,-44.131)
N3: (37.098,3.413,-42.883)
N6: (40.867,5.122,-43.234)
N7: (39.265,5.110,-40.591)
N9: (37.226,4.166,-40.579)
O5': (35.631,5.860,-37.544)
O3': (33.937,1.887,-38.815)
Image (generated by PyMOL):