ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKW:B58:B59

Extra

PDB:
ATOM 1 O3' C A 57 10.120 17.450 43.892 1.00100.75 O
ATOM 2 P U A 58 8.913 17.115 42.889 1.00119.93 P
ATOM 3 OP1 U A 58 7.885 18.167 43.072 1.00119.85 O
ATOM 4 OP2 U A 58 8.534 15.700 43.120 1.00119.53 O
ATOM 5 O5' U A 58 9.595 17.266 41.461 1.00110.75 O
ATOM 6 C5' U A 58 10.571 18.269 41.227 1.00111.56 C
ATOM 7 C4' U A 58 11.492 17.890 40.097 1.00111.93 C
ATOM 8 O4' U A 58 12.421 16.866 40.536 1.00113.86 O
ATOM 9 C3' U A 58 10.832 17.282 38.873 1.00109.77 C
ATOM 10 O3' U A 58 10.248 18.253 38.025 1.00109.13 O
ATOM 11 C2' U A 58 11.978 16.517 38.223 1.00109.42 C
ATOM 12 O2' U A 58 12.807 17.400 37.482 1.00107.63 O
ATOM 13 C1' U A 58 12.760 16.032 39.447 1.00112.64 C
ATOM 14 N1 U A 58 12.451 14.619 39.802 1.00114.07 N
ATOM 15 C2 U A 58 13.411 13.674 39.491 1.00115.06 C
ATOM 16 O2 U A 58 14.456 13.964 38.943 1.00117.73 O
ATOM 17 N3 U A 58 13.118 12.379 39.831 1.00113.11 N
ATOM 18 C4 U A 58 11.977 11.932 40.452 1.00112.79 C
ATOM 19 O4 U A 58 11.862 10.732 40.692 1.00112.30 O
ATOM 20 C5 U A 58 11.026 12.958 40.753 1.00113.89 C
ATOM 21 C6 U A 58 11.288 14.233 40.429 1.00114.55 C
ATOM 22 P A A 59 8.917 17.906 37.192 1.00113.14 P
ATOM 23 OP1 A A 59 8.272 19.197 36.849 1.00113.26 O
ATOM 24 OP2 A A 59 8.150 16.910 37.983 1.00112.43 O
ATOM 25 O5' A A 59 9.486 17.218 35.876 1.00 98.40 O
TER

ATOM 1 O3' U B 58 10.248 18.253 38.025 1.00109.13 O
ATOM 2 P A B 59 8.917 17.906 37.192 1.00113.14 P
ATOM 3 OP1 A B 59 8.272 19.197 36.849 1.00113.26 O
ATOM 4 OP2 A B 59 8.150 16.910 37.983 1.00112.43 O
ATOM 5 O5' A B 59 9.486 17.218 35.876 1.00 98.40 O
ATOM 6 C5' A B 59 10.459 17.866 35.072 1.00 96.91 C
ATOM 7 C4' A B 59 11.292 16.869 34.313 1.00 94.31 C
ATOM 8 O4' A B 59 12.017 16.032 35.245 1.00 92.62 O
ATOM 9 C3' A B 59 10.525 15.876 33.459 1.00 95.20 C
ATOM 10 O3' A B 59 10.121 16.417 32.215 1.00 98.32 O
ATOM 11 C2' A B 59 11.507 14.721 33.331 1.00 92.65 C
ATOM 12 O2' A B 59 12.497 15.017 32.360 1.00 93.75 O
ATOM 13 C1' A B 59 12.172 14.736 34.706 1.00 90.59 C
ATOM 14 N9 A B 59 11.571 13.762 35.633 1.00 86.38 N
ATOM 15 C8 A B 59 10.767 14.019 36.711 1.00 87.47 C
ATOM 16 N7 A B 59 10.396 12.944 37.359 1.00 87.26 N
ATOM 17 C5 A B 59 11.003 11.912 36.663 1.00 83.44 C
ATOM 18 C6 A B 59 10.992 10.526 36.852 1.00 81.61 C
ATOM 19 N6 A B 59 10.325 9.927 37.840 1.00 81.65 N
ATOM 20 N1 A B 59 11.695 9.774 35.983 1.00 81.01 N
ATOM 21 C2 A B 59 12.358 10.386 34.997 1.00 80.52 C
ATOM 22 N3 A B 59 12.445 11.684 34.720 1.00 80.44 N
ATOM 23 C4 A B 59 11.734 12.400 35.602 1.00 82.52 C
ATOM 24 P U B 60 8.603 16.256 31.721 1.00101.19 P
ATOM 25 OP1 U B 60 8.297 17.432 30.870 1.00102.13 O
ATOM 26 OP2 U B 60 7.774 16.013 32.930 1.00 97.46 O
ATOM 27 O5' U B 60 8.657 14.934 30.831 1.00 79.66 O
TER

Atoms:
C4: (11.977,11.932,40.452)
N3: (13.118,12.379,39.831)
OP1: (7.885,18.167,43.072)
OP2: (8.534,15.700,43.120)
C2: (13.411,13.674,39.491)
C1': (12.760,16.032,39.447)
C3': (10.832,17.282,38.873)
O5': (9.595,17.266,41.461)
O4': (12.421,16.866,40.536)
C5': (10.571,18.269,41.227)
P: (8.913,17.115,42.889)
C4': (11.492,17.890,40.097)
C2': (11.978,16.517,38.223)
O2': (12.807,17.400,37.482)
N1: (12.451,14.619,39.802)
O4: (11.862,10.732,40.692)
O2: (14.456,13.964,38.943)
C6: (11.288,14.233,40.429)
C5: (11.026,12.958,40.753)
O3': (10.248,18.253,38.025)
OP1: (8.272,19.197,36.849)
OP2: (8.150,16.910,37.983)
C3': (10.525,15.876,33.459)
C1': (12.172,14.736,34.706)
C5': (10.459,17.866,35.072)
O4': (12.017,16.032,35.245)
C8: (10.767,14.019,36.711)
O2': (12.497,15.017,32.360)
C6: (10.992,10.526,36.852)
C5: (11.003,11.912,36.663)
C4: (11.734,12.400,35.602)
P: (8.917,17.906,37.192)
C4': (11.292,16.869,34.313)
C2': (11.507,14.721,33.331)
C2: (12.358,10.386,34.997)
N1: (11.695,9.774,35.983)
N3: (12.445,11.684,34.720)
N6: (10.325,9.927,37.840)
N7: (10.396,12.944,37.359)
N9: (11.571,13.762,35.633)
O5': (9.486,17.218,35.876)
O3': (10.121,16.417,32.215)
Image (generated by PyMOL):
PyMOL image
show in jmol