Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1278:A1235
Extra
PDB:
ATOM 1 O3' G A1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U A1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U A1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U A1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U A1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U A1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U A1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U A1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U A1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U A1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U A1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U A1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U A1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U A1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U A1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U A1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U A1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U A1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U A1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U A1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U A1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C A1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C A1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C A1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C A1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
ATOM 1 O3' G B1234 29.899 -88.836 0.161 1.00 55.75 O
ATOM 2 P A B1235 29.233 -88.005 1.381 1.00 56.67 P
ATOM 3 OP1 A B1235 30.126 -88.167 2.574 1.00 40.16 O
ATOM 4 OP2 A B1235 27.807 -88.420 1.495 1.00 50.64 O
ATOM 5 O5' A B1235 29.310 -86.533 0.860 1.00 62.15 O
ATOM 6 C5' A B1235 30.552 -85.943 0.572 1.00 62.14 C
ATOM 7 C4' A B1235 30.476 -84.456 0.701 1.00 58.24 C
ATOM 8 O4' A B1235 29.582 -83.943 -0.314 1.00 58.94 O
ATOM 9 C3' A B1235 29.938 -83.944 2.043 1.00 50.16 C
ATOM 10 O3' A B1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 11 C2' A B1235 28.557 -83.432 1.702 1.00 43.56 C
ATOM 12 O2' A B1235 28.148 -82.362 2.505 1.00 60.00 O
ATOM 13 C1' A B1235 28.746 -82.983 0.274 1.00 50.04 C
ATOM 14 N9 A B1235 27.505 -82.885 -0.491 1.00 39.34 N
ATOM 15 C8 A B1235 26.289 -83.438 -0.239 1.00 40.89 C
ATOM 16 N7 A B1235 25.386 -83.084 -1.110 1.00 43.65 N
ATOM 17 C5 A B1235 26.032 -82.227 -1.976 1.00 38.29 C
ATOM 18 C6 A B1235 25.630 -81.520 -3.125 1.00 34.51 C
ATOM 19 N6 A B1235 24.423 -81.509 -3.672 1.00 33.49 N
ATOM 20 N1 A B1235 26.549 -80.777 -3.738 1.00 38.90 N
ATOM 21 C2 A B1235 27.783 -80.742 -3.231 1.00 36.77 C
ATOM 22 N3 A B1235 28.286 -81.352 -2.169 1.00 38.53 N
ATOM 23 C4 A B1235 27.339 -82.096 -1.588 1.00 38.60 C
ATOM 24 P A B1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 25 OP1 A B1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 26 OP2 A B1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 27 O5' A B1236 32.043 -81.818 4.279 1.00 32.66 O
TER
ATOM 2 P U A1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U A1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U A1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U A1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U A1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U A1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U A1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U A1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U A1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U A1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U A1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U A1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U A1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U A1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U A1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U A1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U A1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U A1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U A1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U A1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C A1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C A1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C A1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C A1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
ATOM 1 O3' G B1234 29.899 -88.836 0.161 1.00 55.75 O
ATOM 2 P A B1235 29.233 -88.005 1.381 1.00 56.67 P
ATOM 3 OP1 A B1235 30.126 -88.167 2.574 1.00 40.16 O
ATOM 4 OP2 A B1235 27.807 -88.420 1.495 1.00 50.64 O
ATOM 5 O5' A B1235 29.310 -86.533 0.860 1.00 62.15 O
ATOM 6 C5' A B1235 30.552 -85.943 0.572 1.00 62.14 C
ATOM 7 C4' A B1235 30.476 -84.456 0.701 1.00 58.24 C
ATOM 8 O4' A B1235 29.582 -83.943 -0.314 1.00 58.94 O
ATOM 9 C3' A B1235 29.938 -83.944 2.043 1.00 50.16 C
ATOM 10 O3' A B1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 11 C2' A B1235 28.557 -83.432 1.702 1.00 43.56 C
ATOM 12 O2' A B1235 28.148 -82.362 2.505 1.00 60.00 O
ATOM 13 C1' A B1235 28.746 -82.983 0.274 1.00 50.04 C
ATOM 14 N9 A B1235 27.505 -82.885 -0.491 1.00 39.34 N
ATOM 15 C8 A B1235 26.289 -83.438 -0.239 1.00 40.89 C
ATOM 16 N7 A B1235 25.386 -83.084 -1.110 1.00 43.65 N
ATOM 17 C5 A B1235 26.032 -82.227 -1.976 1.00 38.29 C
ATOM 18 C6 A B1235 25.630 -81.520 -3.125 1.00 34.51 C
ATOM 19 N6 A B1235 24.423 -81.509 -3.672 1.00 33.49 N
ATOM 20 N1 A B1235 26.549 -80.777 -3.738 1.00 38.90 N
ATOM 21 C2 A B1235 27.783 -80.742 -3.231 1.00 36.77 C
ATOM 22 N3 A B1235 28.286 -81.352 -2.169 1.00 38.53 N
ATOM 23 C4 A B1235 27.339 -82.096 -1.588 1.00 38.60 C
ATOM 24 P A B1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 25 OP1 A B1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 26 OP2 A B1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 27 O5' A B1236 32.043 -81.818 4.279 1.00 32.66 O
TER
Atoms:
C4: (27.541,-84.803,-4.088)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
OP1: (30.126,-88.167,2.574)
OP2: (27.807,-88.420,1.495)
C3': (29.938,-83.944,2.043)
C1': (28.746,-82.983,0.274)
C5': (30.552,-85.943,0.572)
O4': (29.582,-83.943,-0.314)
C8: (26.289,-83.438,-0.239)
O2': (28.148,-82.362,2.505)
C6: (25.630,-81.520,-3.125)
C5: (26.032,-82.227,-1.976)
C4: (27.339,-82.096,-1.588)
P: (29.233,-88.005,1.381)
C4': (30.476,-84.456,0.701)
C2': (28.557,-83.432,1.702)
C2: (27.783,-80.742,-3.231)
N1: (26.549,-80.777,-3.738)
N3: (28.286,-81.352,-2.169)
N6: (24.423,-81.509,-3.672)
N7: (25.386,-83.084,-1.110)
N9: (27.505,-82.885,-0.491)
O5': (29.310,-86.533,0.860)
O3': (30.711,-82.846,2.477)
OP2: (27.807,-88.420,1.495)
C3': (29.938,-83.944,2.043)
C1': (28.746,-82.983,0.274)
C5': (30.552,-85.943,0.572)
O4': (29.582,-83.943,-0.314)
C8: (26.289,-83.438,-0.239)
O2': (28.148,-82.362,2.505)
C6: (25.630,-81.520,-3.125)
C5: (26.032,-82.227,-1.976)
C4: (27.339,-82.096,-1.588)
P: (29.233,-88.005,1.381)
C4': (30.476,-84.456,0.701)
C2': (28.557,-83.432,1.702)
C2: (27.783,-80.742,-3.231)
N1: (26.549,-80.777,-3.738)
N3: (28.286,-81.352,-2.169)
N6: (24.423,-81.509,-3.672)
N7: (25.386,-83.084,-1.110)
N9: (27.505,-82.885,-0.491)
O5': (29.310,-86.533,0.860)
O3': (30.711,-82.846,2.477)
Image (generated by PyMOL):