Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:B84:B13
Extra
PDB:
ATOM 1 O3' U A 83 106.033 25.110 32.886 1.00122.76 O
ATOM 2 P G A 84 105.333 25.948 34.065 1.00117.56 P
ATOM 3 OP1 G A 84 106.179 27.126 34.379 1.00115.59 O
ATOM 4 OP2 G A 84 104.967 25.000 35.146 1.00131.80 O
ATOM 5 O5' G A 84 103.991 26.483 33.400 1.00129.75 O
ATOM 6 C5' G A 84 103.702 27.872 33.383 1.00126.31 C
ATOM 7 C4' G A 84 103.028 28.253 32.087 1.00128.06 C
ATOM 8 O4' G A 84 101.693 27.675 32.016 1.00126.42 O
ATOM 9 C3' G A 84 102.800 29.744 31.959 1.00127.17 C
ATOM 10 O3' G A 84 103.983 30.351 31.468 1.00132.03 O
ATOM 11 C2' G A 84 101.627 29.807 30.992 1.00121.83 C
ATOM 12 O2' G A 84 102.017 29.599 29.650 1.00117.78 O
ATOM 13 C1' G A 84 100.782 28.631 31.489 1.00115.82 C
ATOM 14 N9 G A 84 99.885 29.018 32.572 1.00108.59 N
ATOM 15 C8 G A 84 99.871 28.497 33.844 1.00107.57 C
ATOM 16 N7 G A 84 98.990 29.064 34.622 1.00105.71 N
ATOM 17 C5 G A 84 98.376 30.010 33.814 1.00101.86 C
ATOM 18 C6 G A 84 97.345 30.934 34.111 1.00101.17 C
ATOM 19 O6 G A 84 96.751 31.106 35.183 1.00102.75 O
ATOM 20 N1 G A 84 97.019 31.710 33.004 1.00100.85 N
ATOM 21 C2 G A 84 97.609 31.614 31.771 1.00 99.04 C
ATOM 22 N2 G A 84 97.150 32.460 30.837 1.00 98.88 N
ATOM 23 N3 G A 84 98.575 30.754 31.478 1.00 99.98 N
ATOM 24 C4 G A 84 98.908 29.989 32.541 1.00102.77 C
ATOM 25 P G A 85 104.676 31.523 32.315 1.00137.69 P
ATOM 26 OP1 G A 85 106.082 31.634 31.851 1.00144.12 O
ATOM 27 OP2 G A 85 104.396 31.296 33.757 1.00129.82 O
ATOM 28 O5' G A 85 103.886 32.817 31.834 1.00132.48 O
TER
ATOM 1 O3' C B 12 96.768 22.203 39.338 1.00 95.68 O
ATOM 2 P A B 13 98.105 23.049 39.053 1.00 95.20 P
ATOM 3 OP1 A B 13 99.253 22.297 39.623 1.00100.29 O
ATOM 4 OP2 A B 13 97.846 24.444 39.496 1.00 87.44 O
ATOM 5 O5' A B 13 98.237 23.040 37.464 1.00 92.05 O
ATOM 6 C5' A B 13 98.120 21.824 36.732 1.00 93.07 C
ATOM 7 C4' A B 13 98.433 22.048 35.268 1.00102.39 C
ATOM 8 O4' A B 13 97.486 23.007 34.727 1.00103.44 O
ATOM 9 C3' A B 13 99.808 22.648 35.015 1.00108.92 C
ATOM 10 O3' A B 13 100.725 21.872 34.240 1.00117.44 O
ATOM 11 C2' A B 13 99.609 24.150 34.812 1.00103.93 C
ATOM 12 O2' A B 13 100.328 24.670 33.712 1.00105.58 O
ATOM 13 C1' A B 13 98.126 24.238 34.447 1.00 98.02 C
ATOM 14 N9 A B 13 97.402 25.313 35.125 1.00 92.85 N
ATOM 15 C8 A B 13 97.292 25.561 36.472 1.00 93.23 C
ATOM 16 N7 A B 13 96.562 26.613 36.758 1.00 89.62 N
ATOM 17 C5 A B 13 96.166 27.091 35.516 1.00 89.44 C
ATOM 18 C6 A B 13 95.373 28.188 35.132 1.00 90.38 C
ATOM 19 N6 A B 13 94.812 29.039 35.998 1.00 92.58 N
ATOM 20 N1 A B 13 95.173 28.384 33.809 1.00 88.84 N
ATOM 21 C2 A B 13 95.737 27.533 32.940 1.00 88.34 C
ATOM 22 N3 A B 13 96.499 26.469 33.178 1.00 89.87 N
ATOM 23 C4 A B 13 96.677 26.301 34.501 1.00 91.47 C
ATOM 24 P A B 14 102.127 22.507 33.770 1.00133.90 P
ATOM 25 OP1 A B 14 103.116 21.408 33.624 1.00136.75 O
ATOM 26 OP2 A B 14 102.433 23.655 34.662 1.00123.41 O
ATOM 27 O5' A B 14 101.803 23.066 32.315 1.00123.18 O
TER
ATOM 2 P G A 84 105.333 25.948 34.065 1.00117.56 P
ATOM 3 OP1 G A 84 106.179 27.126 34.379 1.00115.59 O
ATOM 4 OP2 G A 84 104.967 25.000 35.146 1.00131.80 O
ATOM 5 O5' G A 84 103.991 26.483 33.400 1.00129.75 O
ATOM 6 C5' G A 84 103.702 27.872 33.383 1.00126.31 C
ATOM 7 C4' G A 84 103.028 28.253 32.087 1.00128.06 C
ATOM 8 O4' G A 84 101.693 27.675 32.016 1.00126.42 O
ATOM 9 C3' G A 84 102.800 29.744 31.959 1.00127.17 C
ATOM 10 O3' G A 84 103.983 30.351 31.468 1.00132.03 O
ATOM 11 C2' G A 84 101.627 29.807 30.992 1.00121.83 C
ATOM 12 O2' G A 84 102.017 29.599 29.650 1.00117.78 O
ATOM 13 C1' G A 84 100.782 28.631 31.489 1.00115.82 C
ATOM 14 N9 G A 84 99.885 29.018 32.572 1.00108.59 N
ATOM 15 C8 G A 84 99.871 28.497 33.844 1.00107.57 C
ATOM 16 N7 G A 84 98.990 29.064 34.622 1.00105.71 N
ATOM 17 C5 G A 84 98.376 30.010 33.814 1.00101.86 C
ATOM 18 C6 G A 84 97.345 30.934 34.111 1.00101.17 C
ATOM 19 O6 G A 84 96.751 31.106 35.183 1.00102.75 O
ATOM 20 N1 G A 84 97.019 31.710 33.004 1.00100.85 N
ATOM 21 C2 G A 84 97.609 31.614 31.771 1.00 99.04 C
ATOM 22 N2 G A 84 97.150 32.460 30.837 1.00 98.88 N
ATOM 23 N3 G A 84 98.575 30.754 31.478 1.00 99.98 N
ATOM 24 C4 G A 84 98.908 29.989 32.541 1.00102.77 C
ATOM 25 P G A 85 104.676 31.523 32.315 1.00137.69 P
ATOM 26 OP1 G A 85 106.082 31.634 31.851 1.00144.12 O
ATOM 27 OP2 G A 85 104.396 31.296 33.757 1.00129.82 O
ATOM 28 O5' G A 85 103.886 32.817 31.834 1.00132.48 O
TER
ATOM 1 O3' C B 12 96.768 22.203 39.338 1.00 95.68 O
ATOM 2 P A B 13 98.105 23.049 39.053 1.00 95.20 P
ATOM 3 OP1 A B 13 99.253 22.297 39.623 1.00100.29 O
ATOM 4 OP2 A B 13 97.846 24.444 39.496 1.00 87.44 O
ATOM 5 O5' A B 13 98.237 23.040 37.464 1.00 92.05 O
ATOM 6 C5' A B 13 98.120 21.824 36.732 1.00 93.07 C
ATOM 7 C4' A B 13 98.433 22.048 35.268 1.00102.39 C
ATOM 8 O4' A B 13 97.486 23.007 34.727 1.00103.44 O
ATOM 9 C3' A B 13 99.808 22.648 35.015 1.00108.92 C
ATOM 10 O3' A B 13 100.725 21.872 34.240 1.00117.44 O
ATOM 11 C2' A B 13 99.609 24.150 34.812 1.00103.93 C
ATOM 12 O2' A B 13 100.328 24.670 33.712 1.00105.58 O
ATOM 13 C1' A B 13 98.126 24.238 34.447 1.00 98.02 C
ATOM 14 N9 A B 13 97.402 25.313 35.125 1.00 92.85 N
ATOM 15 C8 A B 13 97.292 25.561 36.472 1.00 93.23 C
ATOM 16 N7 A B 13 96.562 26.613 36.758 1.00 89.62 N
ATOM 17 C5 A B 13 96.166 27.091 35.516 1.00 89.44 C
ATOM 18 C6 A B 13 95.373 28.188 35.132 1.00 90.38 C
ATOM 19 N6 A B 13 94.812 29.039 35.998 1.00 92.58 N
ATOM 20 N1 A B 13 95.173 28.384 33.809 1.00 88.84 N
ATOM 21 C2 A B 13 95.737 27.533 32.940 1.00 88.34 C
ATOM 22 N3 A B 13 96.499 26.469 33.178 1.00 89.87 N
ATOM 23 C4 A B 13 96.677 26.301 34.501 1.00 91.47 C
ATOM 24 P A B 14 102.127 22.507 33.770 1.00133.90 P
ATOM 25 OP1 A B 14 103.116 21.408 33.624 1.00136.75 O
ATOM 26 OP2 A B 14 102.433 23.655 34.662 1.00123.41 O
ATOM 27 O5' A B 14 101.803 23.066 32.315 1.00123.18 O
TER
Atoms:
OP1: (106.179,27.126,34.379)
OP2: (104.967,25.000,35.146)
C3': (102.800,29.744,31.959)
C1': (100.782,28.631,31.489)
C5': (103.702,27.872,33.383)
O6: (96.751,31.106,35.183)
O4': (101.693,27.675,32.016)
C8: (99.871,28.497,33.844)
C2: (97.609,31.614,31.771)
C6: (97.345,30.934,34.111)
C5: (98.376,30.010,33.814)
C4: (98.908,29.989,32.541)
P: (105.333,25.948,34.065)
C4': (103.028,28.253,32.087)
C2': (101.627,29.807,30.992)
O2': (102.017,29.599,29.650)
N1: (97.019,31.710,33.004)
N2: (97.150,32.460,30.837)
N3: (98.575,30.754,31.478)
N7: (98.990,29.064,34.622)
N9: (99.885,29.018,32.572)
O5': (103.991,26.483,33.400)
O3': (103.983,30.351,31.468)
OP2: (104.967,25.000,35.146)
C3': (102.800,29.744,31.959)
C1': (100.782,28.631,31.489)
C5': (103.702,27.872,33.383)
O6: (96.751,31.106,35.183)
O4': (101.693,27.675,32.016)
C8: (99.871,28.497,33.844)
C2: (97.609,31.614,31.771)
C6: (97.345,30.934,34.111)
C5: (98.376,30.010,33.814)
C4: (98.908,29.989,32.541)
P: (105.333,25.948,34.065)
C4': (103.028,28.253,32.087)
C2': (101.627,29.807,30.992)
O2': (102.017,29.599,29.650)
N1: (97.019,31.710,33.004)
N2: (97.150,32.460,30.837)
N3: (98.575,30.754,31.478)
N7: (98.990,29.064,34.622)
N9: (99.885,29.018,32.572)
O5': (103.991,26.483,33.400)
O3': (103.983,30.351,31.468)
OP1: (99.253,22.297,39.623)
OP2: (97.846,24.444,39.496)
C3': (99.808,22.648,35.015)
C1': (98.126,24.238,34.447)
C5': (98.120,21.824,36.732)
O4': (97.486,23.007,34.727)
C8: (97.292,25.561,36.472)
O2': (100.328,24.670,33.712)
C6: (95.373,28.188,35.132)
C5: (96.166,27.091,35.516)
C4: (96.677,26.301,34.501)
P: (98.105,23.049,39.053)
C4': (98.433,22.048,35.268)
C2': (99.609,24.150,34.812)
C2: (95.737,27.533,32.940)
N1: (95.173,28.384,33.809)
N3: (96.499,26.469,33.178)
N6: (94.812,29.039,35.998)
N7: (96.562,26.613,36.758)
N9: (97.402,25.313,35.125)
O5': (98.237,23.040,37.464)
O3': (100.725,21.872,34.240)
OP2: (97.846,24.444,39.496)
C3': (99.808,22.648,35.015)
C1': (98.126,24.238,34.447)
C5': (98.120,21.824,36.732)
O4': (97.486,23.007,34.727)
C8: (97.292,25.561,36.472)
O2': (100.328,24.670,33.712)
C6: (95.373,28.188,35.132)
C5: (96.166,27.091,35.516)
C4: (96.677,26.301,34.501)
P: (98.105,23.049,39.053)
C4': (98.433,22.048,35.268)
C2': (99.609,24.150,34.812)
C2: (95.737,27.533,32.940)
N1: (95.173,28.384,33.809)
N3: (96.499,26.469,33.178)
N6: (94.812,29.039,35.998)
N7: (96.562,26.613,36.758)
N9: (97.402,25.313,35.125)
O5': (98.237,23.040,37.464)
O3': (100.725,21.872,34.240)
Image (generated by PyMOL):