ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GDI:Y10:Y34

Extra

PDB:
ATOM 1 O3' G A 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 2 P U A 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 3 OP1 U A 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 4 OP2 U A 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 5 O5' U A 10 12.988 5.099 51.860 1.00 34.28 O
ATOM 6 C5' U A 10 12.709 6.348 51.237 1.00 33.56 C
ATOM 7 C4' U A 10 13.580 6.528 50.007 1.00 33.91 C
ATOM 8 O4' U A 10 14.972 6.346 50.365 1.00 34.21 O
ATOM 9 C3' U A 10 13.324 5.523 48.893 1.00 34.35 C
ATOM 10 O3' U A 10 12.326 6.030 48.020 1.00 34.63 O
ATOM 11 C2' U A 10 14.670 5.454 48.178 1.00 34.11 C
ATOM 12 O2' U A 10 14.741 6.370 47.103 1.00 34.08 O
ATOM 13 C1' U A 10 15.684 5.819 49.263 1.00 34.22 C
ATOM 14 N1 U A 10 16.490 4.644 49.709 1.00 34.18 N
ATOM 15 C2 U A 10 17.785 4.504 49.254 1.00 34.22 C
ATOM 16 O2 U A 10 18.322 5.306 48.510 1.00 34.60 O
ATOM 17 N3 U A 10 18.437 3.383 49.705 1.00 33.95 N
ATOM 18 C4 U A 10 17.930 2.409 50.545 1.00 34.11 C
ATOM 19 O4 U A 10 18.635 1.460 50.867 1.00 34.28 O
ATOM 20 C5 U A 10 16.573 2.623 50.974 1.00 34.28 C
ATOM 21 C6 U A 10 15.918 3.707 50.546 1.00 34.23 C
ATOM 22 P G A 11 11.066 5.142 47.600 1.00 35.46 P
ATOM 23 OP1 G A 11 10.949 4.018 48.558 1.00 34.93 O
ATOM 24 OP2 G A 11 11.159 4.875 46.146 1.00 35.33 O
ATOM 25 O5' G A 11 9.848 6.157 47.819 1.00 34.79 O
TER

ATOM 1 O3' A B 33 16.596 7.153 44.743 1.00 35.80 O
ATOM 2 P A B 34 17.196 6.301 43.533 1.00 37.94 P
ATOM 3 OP1 A B 34 17.561 7.238 42.447 1.00 37.70 O
ATOM 4 OP2 A B 34 16.268 5.180 43.265 1.00 38.14 O
ATOM 5 O5' A B 34 18.523 5.706 44.198 1.00 38.95 O
ATOM 6 C5' A B 34 19.656 5.380 43.407 1.00 40.37 C
ATOM 7 C4' A B 34 20.015 3.922 43.610 1.00 41.38 C
ATOM 8 O4' A B 34 19.545 3.490 44.911 1.00 41.28 O
ATOM 9 C3' A B 34 19.384 2.980 42.588 1.00 42.32 C
ATOM 10 O3' A B 34 20.397 2.327 41.834 1.00 43.37 O
ATOM 11 C2' A B 34 18.567 1.990 43.417 1.00 42.22 C
ATOM 12 O2' A B 34 18.709 0.658 42.964 1.00 42.25 O
ATOM 13 C1' A B 34 19.156 2.138 44.816 1.00 41.57 C
ATOM 14 N9 A B 34 18.191 1.837 45.869 1.00 41.32 N
ATOM 15 C8 A B 34 17.100 2.580 46.225 1.00 41.26 C
ATOM 16 N7 A B 34 16.397 2.053 47.200 1.00 41.37 N
ATOM 17 C5 A B 34 17.070 0.880 47.501 1.00 41.06 C
ATOM 18 C6 A B 34 16.832 -0.136 48.449 1.00 41.08 C
ATOM 19 N6 A B 34 15.803 -0.124 49.303 1.00 41.04 N
ATOM 20 N1 A B 34 17.699 -1.171 48.487 1.00 41.11 N
ATOM 21 C2 A B 34 18.729 -1.180 47.633 1.00 41.14 C
ATOM 22 N3 A B 34 19.053 -0.285 46.701 1.00 40.97 N
ATOM 23 C4 A B 34 18.176 0.730 46.687 1.00 41.10 C
ATOM 24 P A B 35 21.097 3.083 40.608 1.00 44.53 P
ATOM 25 OP1 A B 35 20.294 4.285 40.284 1.00 44.49 O
ATOM 26 OP2 A B 35 21.383 2.083 39.555 1.00 44.08 O
ATOM 27 O5' A B 35 22.490 3.544 41.245 1.00 43.86 O
TER

Atoms:
C4: (17.930,2.409,50.545)
N3: (18.437,3.383,49.705)
OP1: (11.123,5.367,53.515)
OP2: (12.702,3.354,53.608)
C2: (17.785,4.504,49.254)
C1': (15.684,5.819,49.263)
C3': (13.324,5.523,48.893)
O5': (12.988,5.099,51.860)
O4': (14.972,6.346,50.365)
C5': (12.709,6.348,51.237)
P: (12.475,4.790,53.343)
C4': (13.580,6.528,50.007)
C2': (14.670,5.454,48.178)
O2': (14.741,6.370,47.103)
N1: (16.490,4.644,49.709)
O4: (18.635,1.460,50.867)
O2: (18.322,5.306,48.510)
C6: (15.918,3.707,50.546)
C5: (16.573,2.623,50.974)
O3': (12.326,6.030,48.020)
OP1: (17.561,7.238,42.447)
OP2: (16.268,5.180,43.265)
C3': (19.384,2.980,42.588)
C1': (19.156,2.138,44.816)
C5': (19.656,5.380,43.407)
O4': (19.545,3.490,44.911)
C8: (17.100,2.580,46.225)
O2': (18.709,0.658,42.964)
C6: (16.832,-0.136,48.449)
C5: (17.070,0.880,47.501)
C4: (18.176,0.730,46.687)
P: (17.196,6.301,43.533)
C4': (20.015,3.922,43.610)
C2': (18.567,1.990,43.417)
C2: (18.729,-1.180,47.633)
N1: (17.699,-1.171,48.487)
N3: (19.053,-0.285,46.701)
N6: (15.803,-0.124,49.303)
N7: (16.397,2.053,47.200)
N9: (18.191,1.837,45.869)
O5': (18.523,5.706,44.198)
O3': (20.397,2.327,41.834)
Image (generated by PyMOL):
PyMOL image
show in jmol