ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01729:01964

Extra

PDB:
ATOM 1 O3' U A1728 120.193 141.529 102.325 1.00 41.02 O
ATOM 2 P U A1729 121.688 141.509 101.743 1.00 42.16 P
ATOM 3 OP1 U A1729 122.068 140.101 101.475 1.00 41.34 O
ATOM 4 OP2 U A1729 122.548 142.341 102.614 1.00 43.42 O
ATOM 5 O5' U A1729 121.558 142.256 100.346 1.00 42.67 O
ATOM 6 C5' U A1729 122.615 142.190 99.385 1.00 44.49 C
ATOM 7 C4' U A1729 122.113 142.620 98.035 1.00 46.55 C
ATOM 8 O4' U A1729 121.099 141.681 97.585 1.00 47.31 O
ATOM 9 C3' U A1729 121.466 143.999 97.983 1.00 48.32 C
ATOM 10 O3' U A1729 121.741 144.574 96.709 1.00 50.04 O
ATOM 11 C2' U A1729 119.980 143.669 98.122 1.00 48.16 C
ATOM 12 O2' U A1729 119.104 144.637 97.579 1.00 48.09 O
ATOM 13 C1' U A1729 119.890 142.369 97.328 1.00 47.47 C
ATOM 14 N1 U A1729 118.772 141.491 97.710 1.00 46.39 N
ATOM 15 C2 U A1729 117.959 141.002 96.703 1.00 45.86 C
ATOM 16 O2 U A1729 118.097 141.308 95.528 1.00 44.88 O
ATOM 17 N3 U A1729 116.972 140.143 97.125 1.00 46.44 N
ATOM 18 C4 U A1729 116.714 139.741 98.425 1.00 46.68 C
ATOM 19 O4 U A1729 115.859 138.877 98.639 1.00 45.73 O
ATOM 20 C5 U A1729 117.572 140.321 99.404 1.00 46.84 C
ATOM 21 C6 U A1729 118.547 141.151 99.025 1.00 46.80 C
ATOM 22 P C A1730 123.084 145.429 96.498 1.00 49.14 P
ATOM 23 OP1 C A1730 123.072 145.935 95.103 1.00 47.97 O
ATOM 24 OP2 C A1730 124.207 144.572 96.956 1.00 49.42 O
ATOM 25 O5' C A1730 122.927 146.664 97.495 1.00 47.31 O
TER

ATOM 1 O3' U B1963 114.365 138.288 104.006 1.00 55.96 O
ATOM 2 P A B1964 113.040 139.148 104.299 1.00 53.89 P
ATOM 3 OP1 A B1964 112.827 139.197 105.769 1.00 52.78 O
ATOM 4 OP2 A B1964 111.958 138.631 103.421 1.00 57.20 O
ATOM 5 O5' A B1964 113.407 140.609 103.778 1.00 50.81 O
ATOM 6 C5' A B1964 114.399 141.417 104.438 1.00 45.65 C
ATOM 7 C4' A B1964 114.888 142.495 103.507 1.00 41.80 C
ATOM 8 O4' A B1964 115.544 141.879 102.369 1.00 42.97 O
ATOM 9 C3' A B1964 113.796 143.335 102.884 1.00 40.76 C
ATOM 10 O3' A B1964 113.372 144.367 103.753 1.00 39.42 O
ATOM 11 C2' A B1964 114.457 143.851 101.613 1.00 42.51 C
ATOM 12 O2' A B1964 115.319 144.951 101.834 1.00 44.90 O
ATOM 13 C1' A B1964 115.283 142.633 101.195 1.00 42.43 C
ATOM 14 N9 A B1964 114.578 141.773 100.248 1.00 41.73 N
ATOM 15 C8 A B1964 113.915 140.600 100.512 1.00 42.20 C
ATOM 16 N7 A B1964 113.339 140.073 99.464 1.00 41.77 N
ATOM 17 C5 A B1964 113.648 140.951 98.437 1.00 41.30 C
ATOM 18 C6 A B1964 113.322 140.957 97.072 1.00 41.45 C
ATOM 19 N6 A B1964 112.558 140.028 96.490 1.00 40.30 N
ATOM 20 N1 A B1964 113.805 141.967 96.314 1.00 42.78 N
ATOM 21 C2 A B1964 114.554 142.908 96.905 1.00 43.42 C
ATOM 22 N3 A B1964 114.919 143.016 98.183 1.00 43.78 N
ATOM 23 C4 A B1964 114.426 141.994 98.903 1.00 41.88 C
ATOM 24 P A B1965 111.856 144.883 103.682 1.00 39.96 P
ATOM 25 OP1 A B1965 111.702 146.113 104.508 1.00 41.97 O
ATOM 26 OP2 A B1965 110.984 143.715 103.953 1.00 40.59 O
ATOM 27 O5' A B1965 111.695 145.316 102.159 1.00 38.38 O
TER

Atoms:
C4: (116.714,139.741,98.425)
N3: (116.972,140.143,97.125)
OP1: (122.068,140.101,101.475)
OP2: (122.548,142.341,102.614)
C2: (117.959,141.002,96.703)
C1': (119.890,142.369,97.328)
C3': (121.466,143.999,97.983)
O5': (121.558,142.256,100.346)
O4': (121.099,141.681,97.585)
C5': (122.615,142.190,99.385)
P: (121.688,141.509,101.743)
C4': (122.113,142.620,98.035)
C2': (119.980,143.669,98.122)
O2': (119.104,144.637,97.579)
N1: (118.772,141.491,97.710)
O4: (115.859,138.877,98.639)
O2: (118.097,141.308,95.528)
C6: (118.547,141.151,99.025)
C5: (117.572,140.321,99.404)
O3': (121.741,144.574,96.709)
OP1: (112.827,139.197,105.769)
OP2: (111.958,138.631,103.421)
C3': (113.796,143.335,102.884)
C1': (115.283,142.633,101.195)
C5': (114.399,141.417,104.438)
O4': (115.544,141.879,102.369)
C8: (113.915,140.600,100.512)
O2': (115.319,144.951,101.834)
C6: (113.322,140.957,97.072)
C5: (113.648,140.951,98.437)
C4: (114.426,141.994,98.903)
P: (113.040,139.148,104.299)
C4': (114.888,142.495,103.507)
C2': (114.457,143.851,101.613)
C2: (114.554,142.908,96.905)
N1: (113.805,141.967,96.314)
N3: (114.919,143.016,98.183)
N6: (112.558,140.028,96.490)
N7: (113.339,140.073,99.464)
N9: (114.578,141.773,100.248)
O5': (113.407,140.609,103.778)
O3': (113.372,144.367,103.753)
Image (generated by PyMOL):
PyMOL image
show in jmol