Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1560:A1559
Extra
PDB:
ATOM 1 O3' A A1559 -38.172 -11.477 21.362 1.00 0.01 O
ATOM 2 P G A1560 -37.798 -10.998 22.819 1.00 0.74 P
ATOM 3 OP1 G A1560 -38.089 -12.114 23.720 1.00 0.74 O
ATOM 4 OP2 G A1560 -38.479 -9.724 23.048 1.00 0.74 O
ATOM 5 O5' G A1560 -36.240 -10.781 22.718 1.00 0.74 O
ATOM 6 C5' G A1560 -35.352 -11.845 22.986 1.00 0.74 C
ATOM 7 C4' G A1560 -33.925 -11.371 23.064 1.00 0.74 C
ATOM 8 O4' G A1560 -33.690 -10.419 21.997 1.00 0.74 O
ATOM 9 C3' G A1560 -33.528 -10.677 24.372 1.00 0.74 C
ATOM 10 O3' G A1560 -32.220 -11.114 24.785 1.00 0.74 O
ATOM 11 C2' G A1560 -33.505 -9.197 23.993 1.00 0.74 C
ATOM 12 O2' G A1560 -32.575 -8.443 24.704 1.00 0.74 O
ATOM 13 C1' G A1560 -33.153 -9.227 22.519 1.00 0.74 C
ATOM 14 N9 G A1560 -33.712 -8.109 21.764 1.00 0.77 N
ATOM 15 C8 G A1560 -34.937 -8.055 21.166 1.00 0.77 C
ATOM 16 N7 G A1560 -35.170 -6.940 20.551 1.00 0.77 N
ATOM 17 C5 G A1560 -34.023 -6.223 20.756 1.00 0.77 C
ATOM 18 C6 G A1560 -33.702 -4.915 20.345 1.00 0.77 C
ATOM 19 O6 G A1560 -34.412 -4.127 19.677 1.00 0.77 O
ATOM 20 N1 G A1560 -32.417 -4.547 20.755 1.00 0.77 N
ATOM 21 C2 G A1560 -31.593 -5.342 21.480 1.00 0.77 C
ATOM 22 N2 G A1560 -30.421 -4.798 21.766 1.00 0.77 N
ATOM 23 N3 G A1560 -31.888 -6.547 21.902 1.00 0.77 N
ATOM 24 C4 G A1560 -33.109 -6.919 21.495 1.00 0.77 C
ATOM 25 P G A1561 -31.819 -11.145 26.342 1.00 0.01 P
ATOM 26 OP1 G A1561 -32.872 -10.434 27.083 1.00 0.01 O
ATOM 27 OP2 G A1561 -30.426 -10.661 26.449 1.00 0.01 O
ATOM 28 O5' G A1561 -31.870 -12.674 26.707 1.00 0.01 O
TER
ATOM 1 O3' C B1558 -38.242 -8.170 15.916 1.00 0.01 O
ATOM 2 P A B1559 -39.562 -8.113 16.821 1.00 0.01 P
ATOM 3 OP1 A B1559 -40.673 -8.705 16.036 1.00 0.01 O
ATOM 4 OP2 A B1559 -39.704 -6.740 17.321 1.00 0.01 O
ATOM 5 O5' A B1559 -39.179 -9.077 18.007 1.00 0.01 O
ATOM 6 C5' A B1559 -40.172 -9.608 18.872 1.00 0.01 C
ATOM 7 C4' A B1559 -39.639 -10.781 19.638 1.00 0.01 C
ATOM 8 O4' A B1559 -39.417 -11.861 18.712 1.00 0.01 O
ATOM 9 C3' A B1559 -38.295 -10.557 20.310 1.00 0.01 C
ATOM 10 O3' A B1559 -38.172 -11.477 21.362 1.00 0.01 O
ATOM 11 C2' A B1559 -37.325 -10.954 19.224 1.00 0.01 C
ATOM 12 O2' A B1559 -36.059 -11.295 19.695 1.00 0.01 O
ATOM 13 C1' A B1559 -38.032 -12.158 18.644 1.00 0.01 C
ATOM 14 N9 A B1559 -37.722 -12.420 17.254 1.00 0.01 N
ATOM 15 C8 A B1559 -37.592 -11.484 16.282 1.00 0.01 C
ATOM 16 N7 A B1559 -37.379 -12.011 15.104 1.00 0.01 N
ATOM 17 C5 A B1559 -37.404 -13.379 15.325 1.00 0.01 C
ATOM 18 C6 A B1559 -37.248 -14.455 14.455 1.00 0.01 C
ATOM 19 N6 A B1559 -37.016 -14.317 13.149 1.00 0.01 N
ATOM 20 N1 A B1559 -37.338 -15.682 14.987 1.00 0.01 N
ATOM 21 C2 A B1559 -37.573 -15.789 16.303 1.00 0.01 C
ATOM 22 N3 A B1559 -37.743 -14.850 17.213 1.00 0.01 N
ATOM 23 C4 A B1559 -37.631 -13.647 16.648 1.00 0.01 C
ATOM 24 P G B1560 -37.798 -10.998 22.819 1.00 0.74 P
ATOM 25 OP1 G B1560 -38.089 -12.114 23.720 1.00 0.74 O
ATOM 26 OP2 G B1560 -38.479 -9.724 23.048 1.00 0.74 O
ATOM 27 O5' G B1560 -36.240 -10.781 22.718 1.00 0.74 O
TER
ATOM 2 P G A1560 -37.798 -10.998 22.819 1.00 0.74 P
ATOM 3 OP1 G A1560 -38.089 -12.114 23.720 1.00 0.74 O
ATOM 4 OP2 G A1560 -38.479 -9.724 23.048 1.00 0.74 O
ATOM 5 O5' G A1560 -36.240 -10.781 22.718 1.00 0.74 O
ATOM 6 C5' G A1560 -35.352 -11.845 22.986 1.00 0.74 C
ATOM 7 C4' G A1560 -33.925 -11.371 23.064 1.00 0.74 C
ATOM 8 O4' G A1560 -33.690 -10.419 21.997 1.00 0.74 O
ATOM 9 C3' G A1560 -33.528 -10.677 24.372 1.00 0.74 C
ATOM 10 O3' G A1560 -32.220 -11.114 24.785 1.00 0.74 O
ATOM 11 C2' G A1560 -33.505 -9.197 23.993 1.00 0.74 C
ATOM 12 O2' G A1560 -32.575 -8.443 24.704 1.00 0.74 O
ATOM 13 C1' G A1560 -33.153 -9.227 22.519 1.00 0.74 C
ATOM 14 N9 G A1560 -33.712 -8.109 21.764 1.00 0.77 N
ATOM 15 C8 G A1560 -34.937 -8.055 21.166 1.00 0.77 C
ATOM 16 N7 G A1560 -35.170 -6.940 20.551 1.00 0.77 N
ATOM 17 C5 G A1560 -34.023 -6.223 20.756 1.00 0.77 C
ATOM 18 C6 G A1560 -33.702 -4.915 20.345 1.00 0.77 C
ATOM 19 O6 G A1560 -34.412 -4.127 19.677 1.00 0.77 O
ATOM 20 N1 G A1560 -32.417 -4.547 20.755 1.00 0.77 N
ATOM 21 C2 G A1560 -31.593 -5.342 21.480 1.00 0.77 C
ATOM 22 N2 G A1560 -30.421 -4.798 21.766 1.00 0.77 N
ATOM 23 N3 G A1560 -31.888 -6.547 21.902 1.00 0.77 N
ATOM 24 C4 G A1560 -33.109 -6.919 21.495 1.00 0.77 C
ATOM 25 P G A1561 -31.819 -11.145 26.342 1.00 0.01 P
ATOM 26 OP1 G A1561 -32.872 -10.434 27.083 1.00 0.01 O
ATOM 27 OP2 G A1561 -30.426 -10.661 26.449 1.00 0.01 O
ATOM 28 O5' G A1561 -31.870 -12.674 26.707 1.00 0.01 O
TER
ATOM 1 O3' C B1558 -38.242 -8.170 15.916 1.00 0.01 O
ATOM 2 P A B1559 -39.562 -8.113 16.821 1.00 0.01 P
ATOM 3 OP1 A B1559 -40.673 -8.705 16.036 1.00 0.01 O
ATOM 4 OP2 A B1559 -39.704 -6.740 17.321 1.00 0.01 O
ATOM 5 O5' A B1559 -39.179 -9.077 18.007 1.00 0.01 O
ATOM 6 C5' A B1559 -40.172 -9.608 18.872 1.00 0.01 C
ATOM 7 C4' A B1559 -39.639 -10.781 19.638 1.00 0.01 C
ATOM 8 O4' A B1559 -39.417 -11.861 18.712 1.00 0.01 O
ATOM 9 C3' A B1559 -38.295 -10.557 20.310 1.00 0.01 C
ATOM 10 O3' A B1559 -38.172 -11.477 21.362 1.00 0.01 O
ATOM 11 C2' A B1559 -37.325 -10.954 19.224 1.00 0.01 C
ATOM 12 O2' A B1559 -36.059 -11.295 19.695 1.00 0.01 O
ATOM 13 C1' A B1559 -38.032 -12.158 18.644 1.00 0.01 C
ATOM 14 N9 A B1559 -37.722 -12.420 17.254 1.00 0.01 N
ATOM 15 C8 A B1559 -37.592 -11.484 16.282 1.00 0.01 C
ATOM 16 N7 A B1559 -37.379 -12.011 15.104 1.00 0.01 N
ATOM 17 C5 A B1559 -37.404 -13.379 15.325 1.00 0.01 C
ATOM 18 C6 A B1559 -37.248 -14.455 14.455 1.00 0.01 C
ATOM 19 N6 A B1559 -37.016 -14.317 13.149 1.00 0.01 N
ATOM 20 N1 A B1559 -37.338 -15.682 14.987 1.00 0.01 N
ATOM 21 C2 A B1559 -37.573 -15.789 16.303 1.00 0.01 C
ATOM 22 N3 A B1559 -37.743 -14.850 17.213 1.00 0.01 N
ATOM 23 C4 A B1559 -37.631 -13.647 16.648 1.00 0.01 C
ATOM 24 P G B1560 -37.798 -10.998 22.819 1.00 0.74 P
ATOM 25 OP1 G B1560 -38.089 -12.114 23.720 1.00 0.74 O
ATOM 26 OP2 G B1560 -38.479 -9.724 23.048 1.00 0.74 O
ATOM 27 O5' G B1560 -36.240 -10.781 22.718 1.00 0.74 O
TER
Atoms:
OP1: (-38.089,-12.114,23.720)
OP2: (-38.479,-9.724,23.048)
C3': (-33.528,-10.677,24.372)
C1': (-33.153,-9.227,22.519)
C5': (-35.352,-11.845,22.986)
O6: (-34.412,-4.127,19.677)
O4': (-33.690,-10.419,21.997)
C8: (-34.937,-8.055,21.166)
C2: (-31.593,-5.342,21.480)
C6: (-33.702,-4.915,20.345)
C5: (-34.023,-6.223,20.756)
C4: (-33.109,-6.919,21.495)
P: (-37.798,-10.998,22.819)
C4': (-33.925,-11.371,23.064)
C2': (-33.505,-9.197,23.993)
O2': (-32.575,-8.443,24.704)
N1: (-32.417,-4.547,20.755)
N2: (-30.421,-4.798,21.766)
N3: (-31.888,-6.547,21.902)
N7: (-35.170,-6.940,20.551)
N9: (-33.712,-8.109,21.764)
O5': (-36.240,-10.781,22.718)
O3': (-32.220,-11.114,24.785)
OP2: (-38.479,-9.724,23.048)
C3': (-33.528,-10.677,24.372)
C1': (-33.153,-9.227,22.519)
C5': (-35.352,-11.845,22.986)
O6: (-34.412,-4.127,19.677)
O4': (-33.690,-10.419,21.997)
C8: (-34.937,-8.055,21.166)
C2: (-31.593,-5.342,21.480)
C6: (-33.702,-4.915,20.345)
C5: (-34.023,-6.223,20.756)
C4: (-33.109,-6.919,21.495)
P: (-37.798,-10.998,22.819)
C4': (-33.925,-11.371,23.064)
C2': (-33.505,-9.197,23.993)
O2': (-32.575,-8.443,24.704)
N1: (-32.417,-4.547,20.755)
N2: (-30.421,-4.798,21.766)
N3: (-31.888,-6.547,21.902)
N7: (-35.170,-6.940,20.551)
N9: (-33.712,-8.109,21.764)
O5': (-36.240,-10.781,22.718)
O3': (-32.220,-11.114,24.785)
OP1: (-40.673,-8.705,16.036)
OP2: (-39.704,-6.740,17.321)
C3': (-38.295,-10.557,20.310)
C1': (-38.032,-12.158,18.644)
C5': (-40.172,-9.608,18.872)
O4': (-39.417,-11.861,18.712)
C8: (-37.592,-11.484,16.282)
O2': (-36.059,-11.295,19.695)
C6: (-37.248,-14.455,14.455)
C5: (-37.404,-13.379,15.325)
C4: (-37.631,-13.647,16.648)
P: (-39.562,-8.113,16.821)
C4': (-39.639,-10.781,19.638)
C2': (-37.325,-10.954,19.224)
C2: (-37.573,-15.789,16.303)
N1: (-37.338,-15.682,14.987)
N3: (-37.743,-14.850,17.213)
N6: (-37.016,-14.317,13.149)
N7: (-37.379,-12.011,15.104)
N9: (-37.722,-12.420,17.254)
O5': (-39.179,-9.077,18.007)
O3': (-38.172,-11.477,21.362)
OP2: (-39.704,-6.740,17.321)
C3': (-38.295,-10.557,20.310)
C1': (-38.032,-12.158,18.644)
C5': (-40.172,-9.608,18.872)
O4': (-39.417,-11.861,18.712)
C8: (-37.592,-11.484,16.282)
O2': (-36.059,-11.295,19.695)
C6: (-37.248,-14.455,14.455)
C5: (-37.404,-13.379,15.325)
C4: (-37.631,-13.647,16.648)
P: (-39.562,-8.113,16.821)
C4': (-39.639,-10.781,19.638)
C2': (-37.325,-10.954,19.224)
C2: (-37.573,-15.789,16.303)
N1: (-37.338,-15.682,14.987)
N3: (-37.743,-14.850,17.213)
N6: (-37.016,-14.317,13.149)
N7: (-37.379,-12.011,15.104)
N9: (-37.722,-12.420,17.254)
O5': (-39.179,-9.077,18.007)
O3': (-38.172,-11.477,21.362)
Image (generated by PyMOL):