Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B34:B7
Extra
PDB:
ATOM 1 O3' U A 33 -37.455 7.907 17.798 1.00 30.05 O
ATOM 2 P G A 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 3 OP1 G A 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 4 OP2 G A 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 5 O5' G A 34 -36.294 8.256 19.961 1.00 28.53 O
ATOM 6 C5' G A 34 -35.739 9.569 19.955 1.00 28.30 C
ATOM 7 C4' G A 34 -34.545 9.752 19.031 1.00 28.77 C
ATOM 8 O4' G A 34 -33.341 9.138 19.577 1.00 27.23 O
ATOM 9 C3' G A 34 -34.696 9.222 17.605 1.00 29.51 C
ATOM 10 O3' G A 34 -34.094 10.130 16.704 1.00 29.69 O
ATOM 11 C2' G A 34 -33.884 7.923 17.642 1.00 29.01 C
ATOM 12 O2' G A 34 -33.370 7.537 16.388 1.00 29.57 O
ATOM 13 C1' G A 34 -32.761 8.287 18.602 1.00 27.11 C
ATOM 14 N9 G A 34 -32.174 7.164 19.332 1.00 26.01 N
ATOM 15 C8 G A 34 -32.822 6.038 19.781 1.00 25.88 C
ATOM 16 N7 G A 34 -32.035 5.210 20.412 1.00 25.12 N
ATOM 17 C5 G A 34 -30.793 5.828 20.378 1.00 25.00 C
ATOM 18 C6 G A 34 -29.545 5.409 20.901 1.00 24.66 C
ATOM 19 O6 G A 34 -29.279 4.377 21.516 1.00 25.49 O
ATOM 20 N1 G A 34 -28.539 6.330 20.648 1.00 24.27 N
ATOM 21 C2 G A 34 -28.708 7.507 19.976 1.00 25.17 C
ATOM 22 N2 G A 34 -27.608 8.259 19.835 1.00 25.36 N
ATOM 23 N3 G A 34 -29.867 7.917 19.482 1.00 25.77 N
ATOM 24 C4 G A 34 -30.860 7.033 19.717 1.00 25.57 C
ATOM 25 P U A 35 -35.065 11.167 15.957 1.00 33.06 P
ATOM 26 OP1 U A 35 -34.590 12.525 16.317 1.00 31.52 O
ATOM 27 OP2 U A 35 -36.448 10.768 16.313 1.00 31.96 O
ATOM 28 O5' U A 35 -34.807 10.872 14.417 1.00 33.68 O
TER
ATOM 1 O3' U B 6 -40.072 3.443 26.046 1.00 20.02 O
ATOM 2 P A B 7 -39.415 2.293 25.145 1.00 22.31 P
ATOM 3 OP1 A B 7 -40.528 1.589 24.462 1.00 22.54 O
ATOM 4 OP2 A B 7 -38.506 1.522 26.032 1.00 21.01 O
ATOM 5 O5' A B 7 -38.580 3.154 24.099 1.00 22.51 O
ATOM 6 C5' A B 7 -39.266 3.901 23.101 1.00 22.80 C
ATOM 7 C4' A B 7 -38.295 4.573 22.166 1.00 24.64 C
ATOM 8 O4' A B 7 -37.504 5.579 22.854 1.00 24.26 O
ATOM 9 C3' A B 7 -37.283 3.660 21.499 1.00 25.03 C
ATOM 10 O3' A B 7 -37.859 2.990 20.390 1.00 25.93 O
ATOM 11 C2' A B 7 -36.179 4.636 21.107 1.00 25.47 C
ATOM 12 O2' A B 7 -36.528 5.280 19.894 1.00 26.48 O
ATOM 13 C1' A B 7 -36.227 5.659 22.254 1.00 24.00 C
ATOM 14 N9 A B 7 -35.163 5.497 23.268 1.00 22.76 N
ATOM 15 C8 A B 7 -35.120 4.672 24.363 1.00 22.36 C
ATOM 16 N7 A B 7 -34.013 4.787 25.061 1.00 21.61 N
ATOM 17 C5 A B 7 -33.285 5.754 24.382 1.00 21.75 C
ATOM 18 C6 A B 7 -32.022 6.333 24.606 1.00 21.85 C
ATOM 19 N6 A B 7 -31.224 6.014 25.626 1.00 21.34 N
ATOM 20 N1 A B 7 -31.595 7.270 23.733 1.00 22.48 N
ATOM 21 C2 A B 7 -32.387 7.600 22.707 1.00 23.00 C
ATOM 22 N3 A B 7 -33.590 7.128 22.392 1.00 23.24 N
ATOM 23 C4 A B 7 -33.985 6.199 23.278 1.00 22.58 C
ATOM 24 P U B 8 -37.843 1.387 20.317 1.00 26.75 P
ATOM 25 OP1 U B 8 -38.516 0.968 19.055 1.00 27.76 O
ATOM 26 OP2 U B 8 -38.397 0.908 21.619 1.00 25.36 O
ATOM 27 O5' U B 8 -36.282 1.127 20.217 1.00 26.73 O
TER
ATOM 2 P G A 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 3 OP1 G A 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 4 OP2 G A 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 5 O5' G A 34 -36.294 8.256 19.961 1.00 28.53 O
ATOM 6 C5' G A 34 -35.739 9.569 19.955 1.00 28.30 C
ATOM 7 C4' G A 34 -34.545 9.752 19.031 1.00 28.77 C
ATOM 8 O4' G A 34 -33.341 9.138 19.577 1.00 27.23 O
ATOM 9 C3' G A 34 -34.696 9.222 17.605 1.00 29.51 C
ATOM 10 O3' G A 34 -34.094 10.130 16.704 1.00 29.69 O
ATOM 11 C2' G A 34 -33.884 7.923 17.642 1.00 29.01 C
ATOM 12 O2' G A 34 -33.370 7.537 16.388 1.00 29.57 O
ATOM 13 C1' G A 34 -32.761 8.287 18.602 1.00 27.11 C
ATOM 14 N9 G A 34 -32.174 7.164 19.332 1.00 26.01 N
ATOM 15 C8 G A 34 -32.822 6.038 19.781 1.00 25.88 C
ATOM 16 N7 G A 34 -32.035 5.210 20.412 1.00 25.12 N
ATOM 17 C5 G A 34 -30.793 5.828 20.378 1.00 25.00 C
ATOM 18 C6 G A 34 -29.545 5.409 20.901 1.00 24.66 C
ATOM 19 O6 G A 34 -29.279 4.377 21.516 1.00 25.49 O
ATOM 20 N1 G A 34 -28.539 6.330 20.648 1.00 24.27 N
ATOM 21 C2 G A 34 -28.708 7.507 19.976 1.00 25.17 C
ATOM 22 N2 G A 34 -27.608 8.259 19.835 1.00 25.36 N
ATOM 23 N3 G A 34 -29.867 7.917 19.482 1.00 25.77 N
ATOM 24 C4 G A 34 -30.860 7.033 19.717 1.00 25.57 C
ATOM 25 P U A 35 -35.065 11.167 15.957 1.00 33.06 P
ATOM 26 OP1 U A 35 -34.590 12.525 16.317 1.00 31.52 O
ATOM 27 OP2 U A 35 -36.448 10.768 16.313 1.00 31.96 O
ATOM 28 O5' U A 35 -34.807 10.872 14.417 1.00 33.68 O
TER
ATOM 1 O3' U B 6 -40.072 3.443 26.046 1.00 20.02 O
ATOM 2 P A B 7 -39.415 2.293 25.145 1.00 22.31 P
ATOM 3 OP1 A B 7 -40.528 1.589 24.462 1.00 22.54 O
ATOM 4 OP2 A B 7 -38.506 1.522 26.032 1.00 21.01 O
ATOM 5 O5' A B 7 -38.580 3.154 24.099 1.00 22.51 O
ATOM 6 C5' A B 7 -39.266 3.901 23.101 1.00 22.80 C
ATOM 7 C4' A B 7 -38.295 4.573 22.166 1.00 24.64 C
ATOM 8 O4' A B 7 -37.504 5.579 22.854 1.00 24.26 O
ATOM 9 C3' A B 7 -37.283 3.660 21.499 1.00 25.03 C
ATOM 10 O3' A B 7 -37.859 2.990 20.390 1.00 25.93 O
ATOM 11 C2' A B 7 -36.179 4.636 21.107 1.00 25.47 C
ATOM 12 O2' A B 7 -36.528 5.280 19.894 1.00 26.48 O
ATOM 13 C1' A B 7 -36.227 5.659 22.254 1.00 24.00 C
ATOM 14 N9 A B 7 -35.163 5.497 23.268 1.00 22.76 N
ATOM 15 C8 A B 7 -35.120 4.672 24.363 1.00 22.36 C
ATOM 16 N7 A B 7 -34.013 4.787 25.061 1.00 21.61 N
ATOM 17 C5 A B 7 -33.285 5.754 24.382 1.00 21.75 C
ATOM 18 C6 A B 7 -32.022 6.333 24.606 1.00 21.85 C
ATOM 19 N6 A B 7 -31.224 6.014 25.626 1.00 21.34 N
ATOM 20 N1 A B 7 -31.595 7.270 23.733 1.00 22.48 N
ATOM 21 C2 A B 7 -32.387 7.600 22.707 1.00 23.00 C
ATOM 22 N3 A B 7 -33.590 7.128 22.392 1.00 23.24 N
ATOM 23 C4 A B 7 -33.985 6.199 23.278 1.00 22.58 C
ATOM 24 P U B 8 -37.843 1.387 20.317 1.00 26.75 P
ATOM 25 OP1 U B 8 -38.516 0.968 19.055 1.00 27.76 O
ATOM 26 OP2 U B 8 -38.397 0.908 21.619 1.00 25.36 O
ATOM 27 O5' U B 8 -36.282 1.127 20.217 1.00 26.73 O
TER
Atoms:
OP1: (-38.373,6.781,19.825)
OP2: (-38.540,9.314,19.513)
C3': (-34.696,9.222,17.605)
C1': (-32.761,8.287,18.602)
C5': (-35.739,9.569,19.955)
O6: (-29.279,4.377,21.516)
O4': (-33.341,9.138,19.577)
C8: (-32.822,6.038,19.781)
C2: (-28.708,7.507,19.976)
C6: (-29.545,5.409,20.901)
C5: (-30.793,5.828,20.378)
C4: (-30.860,7.033,19.717)
P: (-37.762,8.056,19.367)
C4': (-34.545,9.752,19.031)
C2': (-33.884,7.923,17.642)
O2': (-33.370,7.537,16.388)
N1: (-28.539,6.330,20.648)
N2: (-27.608,8.259,19.835)
N3: (-29.867,7.917,19.482)
N7: (-32.035,5.210,20.412)
N9: (-32.174,7.164,19.332)
O5': (-36.294,8.256,19.961)
O3': (-34.094,10.130,16.704)
OP2: (-38.540,9.314,19.513)
C3': (-34.696,9.222,17.605)
C1': (-32.761,8.287,18.602)
C5': (-35.739,9.569,19.955)
O6: (-29.279,4.377,21.516)
O4': (-33.341,9.138,19.577)
C8: (-32.822,6.038,19.781)
C2: (-28.708,7.507,19.976)
C6: (-29.545,5.409,20.901)
C5: (-30.793,5.828,20.378)
C4: (-30.860,7.033,19.717)
P: (-37.762,8.056,19.367)
C4': (-34.545,9.752,19.031)
C2': (-33.884,7.923,17.642)
O2': (-33.370,7.537,16.388)
N1: (-28.539,6.330,20.648)
N2: (-27.608,8.259,19.835)
N3: (-29.867,7.917,19.482)
N7: (-32.035,5.210,20.412)
N9: (-32.174,7.164,19.332)
O5': (-36.294,8.256,19.961)
O3': (-34.094,10.130,16.704)
OP1: (-40.528,1.589,24.462)
OP2: (-38.506,1.522,26.032)
C3': (-37.283,3.660,21.499)
C1': (-36.227,5.659,22.254)
C5': (-39.266,3.901,23.101)
O4': (-37.504,5.579,22.854)
C8: (-35.120,4.672,24.363)
O2': (-36.528,5.280,19.894)
C6: (-32.022,6.333,24.606)
C5: (-33.285,5.754,24.382)
C4: (-33.985,6.199,23.278)
P: (-39.415,2.293,25.145)
C4': (-38.295,4.573,22.166)
C2': (-36.179,4.636,21.107)
C2: (-32.387,7.600,22.707)
N1: (-31.595,7.270,23.733)
N3: (-33.590,7.128,22.392)
N6: (-31.224,6.014,25.626)
N7: (-34.013,4.787,25.061)
N9: (-35.163,5.497,23.268)
O5': (-38.580,3.154,24.099)
O3': (-37.859,2.990,20.390)
OP2: (-38.506,1.522,26.032)
C3': (-37.283,3.660,21.499)
C1': (-36.227,5.659,22.254)
C5': (-39.266,3.901,23.101)
O4': (-37.504,5.579,22.854)
C8: (-35.120,4.672,24.363)
O2': (-36.528,5.280,19.894)
C6: (-32.022,6.333,24.606)
C5: (-33.285,5.754,24.382)
C4: (-33.985,6.199,23.278)
P: (-39.415,2.293,25.145)
C4': (-38.295,4.573,22.166)
C2': (-36.179,4.636,21.107)
C2: (-32.387,7.600,22.707)
N1: (-31.595,7.270,23.733)
N3: (-33.590,7.128,22.392)
N6: (-31.224,6.014,25.626)
N7: (-34.013,4.787,25.061)
N9: (-35.163,5.497,23.268)
O5': (-38.580,3.154,24.099)
O3': (-37.859,2.990,20.390)
Image (generated by PyMOL):