Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KUQ:B17:B16
Extra
PDB:
ATOM 1 O3' A A 16 -11.955 50.857 18.304 1.00 66.59 O
ATOM 2 P G A 17 -11.465 52.144 19.167 1.00 59.45 P
ATOM 3 OP1 G A 17 -12.645 52.804 19.779 1.00 53.41 O
ATOM 4 OP2 G A 17 -10.515 52.946 18.356 1.00 51.75 O
ATOM 5 O5' G A 17 -10.707 51.491 20.405 1.00 55.28 O
ATOM 6 C5' G A 17 -11.442 51.068 21.546 1.00 52.14 C
ATOM 7 C4' G A 17 -11.063 49.653 21.933 1.00 50.81 C
ATOM 8 O4' G A 17 -11.479 48.721 20.899 1.00 50.83 O
ATOM 9 C3' G A 17 -9.580 49.369 22.090 1.00 50.75 C
ATOM 10 O3' G A 17 -9.088 49.824 23.346 1.00 50.81 O
ATOM 11 C2' G A 17 -9.530 47.847 21.949 1.00 50.08 C
ATOM 12 O2' G A 17 -9.899 47.151 23.126 1.00 49.49 O
ATOM 13 C1' G A 17 -10.580 47.616 20.860 1.00 49.30 C
ATOM 14 N9 G A 17 -10.009 47.518 19.517 1.00 40.64 N
ATOM 15 C8 G A 17 -10.269 48.324 18.431 1.00 39.44 C
ATOM 16 N7 G A 17 -9.612 47.971 17.361 1.00 38.74 N
ATOM 17 C5 G A 17 -8.874 46.862 17.762 1.00 39.44 C
ATOM 18 C6 G A 17 -7.969 46.024 17.025 1.00 39.95 C
ATOM 19 O6 G A 17 -7.645 46.086 15.819 1.00 39.76 O
ATOM 20 N1 G A 17 -7.431 45.026 17.836 1.00 39.77 N
ATOM 21 C2 G A 17 -7.725 44.841 19.167 1.00 39.68 C
ATOM 22 N2 G A 17 -7.092 43.833 19.770 1.00 40.11 N
ATOM 23 N3 G A 17 -8.575 45.592 19.854 1.00 38.86 N
ATOM 24 C4 G A 17 -9.104 46.578 19.095 1.00 39.38 C
ATOM 25 P A A 18 -7.640 50.525 23.425 1.00 52.71 P
ATOM 26 OP1 A A 18 -7.387 50.770 24.863 1.00 44.87 O
ATOM 27 OP2 A A 18 -7.575 51.662 22.465 1.00 44.93 O
ATOM 28 O5' A A 18 -6.637 49.401 22.895 1.00 51.84 O
TER
ATOM 1 O3' U B 15 -13.030 52.159 12.034 1.00 60.44 O
ATOM 2 P A B 16 -12.394 53.060 13.201 1.00 61.47 P
ATOM 3 OP1 A B 16 -12.871 54.432 12.903 1.00 77.95 O
ATOM 4 OP2 A B 16 -10.942 52.771 13.238 1.00 76.14 O
ATOM 5 O5' A B 16 -13.064 52.567 14.572 1.00 61.75 O
ATOM 6 C5' A B 16 -12.690 53.150 15.840 1.00 63.73 C
ATOM 7 C4' A B 16 -13.377 52.434 17.001 1.00 64.49 C
ATOM 8 O4' A B 16 -14.796 52.374 16.732 1.00 66.07 O
ATOM 9 C3' A B 16 -12.940 50.992 17.258 1.00 65.20 C
ATOM 10 O3' A B 16 -11.955 50.857 18.304 1.00 66.59 O
ATOM 11 C2' A B 16 -14.196 50.295 17.786 1.00 64.94 C
ATOM 12 O2' A B 16 -14.223 50.161 19.193 1.00 63.66 O
ATOM 13 C1' A B 16 -15.335 51.195 17.291 1.00 66.82 C
ATOM 14 N9 A B 16 -16.235 50.588 16.314 1.00 83.77 N
ATOM 15 C8 A B 16 -17.131 51.222 15.497 1.00 84.11 C
ATOM 16 N7 A B 16 -17.806 50.410 14.726 1.00 84.60 N
ATOM 17 C5 A B 16 -17.318 49.157 15.058 1.00 84.73 C
ATOM 18 C6 A B 16 -17.618 47.874 14.589 1.00 85.70 C
ATOM 19 N6 A B 16 -18.509 47.629 13.628 1.00 87.00 N
ATOM 20 N1 A B 16 -16.960 46.832 15.141 1.00 86.18 N
ATOM 21 C2 A B 16 -16.053 47.081 16.089 1.00 85.91 C
ATOM 22 N3 A B 16 -15.674 48.243 16.603 1.00 85.31 N
ATOM 23 C4 A B 16 -16.354 49.252 16.038 1.00 84.05 C
ATOM 24 P G B 17 -11.465 52.144 19.167 1.00 59.45 P
ATOM 25 OP1 G B 17 -12.645 52.804 19.779 1.00 53.41 O
ATOM 26 OP2 G B 17 -10.515 52.946 18.356 1.00 51.75 O
ATOM 27 O5' G B 17 -10.707 51.491 20.405 1.00 55.28 O
TER
ATOM 2 P G A 17 -11.465 52.144 19.167 1.00 59.45 P
ATOM 3 OP1 G A 17 -12.645 52.804 19.779 1.00 53.41 O
ATOM 4 OP2 G A 17 -10.515 52.946 18.356 1.00 51.75 O
ATOM 5 O5' G A 17 -10.707 51.491 20.405 1.00 55.28 O
ATOM 6 C5' G A 17 -11.442 51.068 21.546 1.00 52.14 C
ATOM 7 C4' G A 17 -11.063 49.653 21.933 1.00 50.81 C
ATOM 8 O4' G A 17 -11.479 48.721 20.899 1.00 50.83 O
ATOM 9 C3' G A 17 -9.580 49.369 22.090 1.00 50.75 C
ATOM 10 O3' G A 17 -9.088 49.824 23.346 1.00 50.81 O
ATOM 11 C2' G A 17 -9.530 47.847 21.949 1.00 50.08 C
ATOM 12 O2' G A 17 -9.899 47.151 23.126 1.00 49.49 O
ATOM 13 C1' G A 17 -10.580 47.616 20.860 1.00 49.30 C
ATOM 14 N9 G A 17 -10.009 47.518 19.517 1.00 40.64 N
ATOM 15 C8 G A 17 -10.269 48.324 18.431 1.00 39.44 C
ATOM 16 N7 G A 17 -9.612 47.971 17.361 1.00 38.74 N
ATOM 17 C5 G A 17 -8.874 46.862 17.762 1.00 39.44 C
ATOM 18 C6 G A 17 -7.969 46.024 17.025 1.00 39.95 C
ATOM 19 O6 G A 17 -7.645 46.086 15.819 1.00 39.76 O
ATOM 20 N1 G A 17 -7.431 45.026 17.836 1.00 39.77 N
ATOM 21 C2 G A 17 -7.725 44.841 19.167 1.00 39.68 C
ATOM 22 N2 G A 17 -7.092 43.833 19.770 1.00 40.11 N
ATOM 23 N3 G A 17 -8.575 45.592 19.854 1.00 38.86 N
ATOM 24 C4 G A 17 -9.104 46.578 19.095 1.00 39.38 C
ATOM 25 P A A 18 -7.640 50.525 23.425 1.00 52.71 P
ATOM 26 OP1 A A 18 -7.387 50.770 24.863 1.00 44.87 O
ATOM 27 OP2 A A 18 -7.575 51.662 22.465 1.00 44.93 O
ATOM 28 O5' A A 18 -6.637 49.401 22.895 1.00 51.84 O
TER
ATOM 1 O3' U B 15 -13.030 52.159 12.034 1.00 60.44 O
ATOM 2 P A B 16 -12.394 53.060 13.201 1.00 61.47 P
ATOM 3 OP1 A B 16 -12.871 54.432 12.903 1.00 77.95 O
ATOM 4 OP2 A B 16 -10.942 52.771 13.238 1.00 76.14 O
ATOM 5 O5' A B 16 -13.064 52.567 14.572 1.00 61.75 O
ATOM 6 C5' A B 16 -12.690 53.150 15.840 1.00 63.73 C
ATOM 7 C4' A B 16 -13.377 52.434 17.001 1.00 64.49 C
ATOM 8 O4' A B 16 -14.796 52.374 16.732 1.00 66.07 O
ATOM 9 C3' A B 16 -12.940 50.992 17.258 1.00 65.20 C
ATOM 10 O3' A B 16 -11.955 50.857 18.304 1.00 66.59 O
ATOM 11 C2' A B 16 -14.196 50.295 17.786 1.00 64.94 C
ATOM 12 O2' A B 16 -14.223 50.161 19.193 1.00 63.66 O
ATOM 13 C1' A B 16 -15.335 51.195 17.291 1.00 66.82 C
ATOM 14 N9 A B 16 -16.235 50.588 16.314 1.00 83.77 N
ATOM 15 C8 A B 16 -17.131 51.222 15.497 1.00 84.11 C
ATOM 16 N7 A B 16 -17.806 50.410 14.726 1.00 84.60 N
ATOM 17 C5 A B 16 -17.318 49.157 15.058 1.00 84.73 C
ATOM 18 C6 A B 16 -17.618 47.874 14.589 1.00 85.70 C
ATOM 19 N6 A B 16 -18.509 47.629 13.628 1.00 87.00 N
ATOM 20 N1 A B 16 -16.960 46.832 15.141 1.00 86.18 N
ATOM 21 C2 A B 16 -16.053 47.081 16.089 1.00 85.91 C
ATOM 22 N3 A B 16 -15.674 48.243 16.603 1.00 85.31 N
ATOM 23 C4 A B 16 -16.354 49.252 16.038 1.00 84.05 C
ATOM 24 P G B 17 -11.465 52.144 19.167 1.00 59.45 P
ATOM 25 OP1 G B 17 -12.645 52.804 19.779 1.00 53.41 O
ATOM 26 OP2 G B 17 -10.515 52.946 18.356 1.00 51.75 O
ATOM 27 O5' G B 17 -10.707 51.491 20.405 1.00 55.28 O
TER
Atoms:
OP1: (-12.645,52.804,19.779)
OP2: (-10.515,52.946,18.356)
C3': (-9.580,49.369,22.090)
C1': (-10.580,47.616,20.860)
C5': (-11.442,51.068,21.546)
O6: (-7.645,46.086,15.819)
O4': (-11.479,48.721,20.899)
C8: (-10.269,48.324,18.431)
C2: (-7.725,44.841,19.167)
C6: (-7.969,46.024,17.025)
C5: (-8.874,46.862,17.762)
C4: (-9.104,46.578,19.095)
P: (-11.465,52.144,19.167)
C4': (-11.063,49.653,21.933)
C2': (-9.530,47.847,21.949)
O2': (-9.899,47.151,23.126)
N1: (-7.431,45.026,17.836)
N2: (-7.092,43.833,19.770)
N3: (-8.575,45.592,19.854)
N7: (-9.612,47.971,17.361)
N9: (-10.009,47.518,19.517)
O5': (-10.707,51.491,20.405)
O3': (-9.088,49.824,23.346)
OP2: (-10.515,52.946,18.356)
C3': (-9.580,49.369,22.090)
C1': (-10.580,47.616,20.860)
C5': (-11.442,51.068,21.546)
O6: (-7.645,46.086,15.819)
O4': (-11.479,48.721,20.899)
C8: (-10.269,48.324,18.431)
C2: (-7.725,44.841,19.167)
C6: (-7.969,46.024,17.025)
C5: (-8.874,46.862,17.762)
C4: (-9.104,46.578,19.095)
P: (-11.465,52.144,19.167)
C4': (-11.063,49.653,21.933)
C2': (-9.530,47.847,21.949)
O2': (-9.899,47.151,23.126)
N1: (-7.431,45.026,17.836)
N2: (-7.092,43.833,19.770)
N3: (-8.575,45.592,19.854)
N7: (-9.612,47.971,17.361)
N9: (-10.009,47.518,19.517)
O5': (-10.707,51.491,20.405)
O3': (-9.088,49.824,23.346)
OP1: (-12.871,54.432,12.903)
OP2: (-10.942,52.771,13.238)
C3': (-12.940,50.992,17.258)
C1': (-15.335,51.195,17.291)
C5': (-12.690,53.150,15.840)
O4': (-14.796,52.374,16.732)
C8: (-17.131,51.222,15.497)
O2': (-14.223,50.161,19.193)
C6: (-17.618,47.874,14.589)
C5: (-17.318,49.157,15.058)
C4: (-16.354,49.252,16.038)
P: (-12.394,53.060,13.201)
C4': (-13.377,52.434,17.001)
C2': (-14.196,50.295,17.786)
C2: (-16.053,47.081,16.089)
N1: (-16.960,46.832,15.141)
N3: (-15.674,48.243,16.603)
N6: (-18.509,47.629,13.628)
N7: (-17.806,50.410,14.726)
N9: (-16.235,50.588,16.314)
O5': (-13.064,52.567,14.572)
O3': (-11.955,50.857,18.304)
OP2: (-10.942,52.771,13.238)
C3': (-12.940,50.992,17.258)
C1': (-15.335,51.195,17.291)
C5': (-12.690,53.150,15.840)
O4': (-14.796,52.374,16.732)
C8: (-17.131,51.222,15.497)
O2': (-14.223,50.161,19.193)
C6: (-17.618,47.874,14.589)
C5: (-17.318,49.157,15.058)
C4: (-16.354,49.252,16.038)
P: (-12.394,53.060,13.201)
C4': (-13.377,52.434,17.001)
C2': (-14.196,50.295,17.786)
C2: (-16.053,47.081,16.089)
N1: (-16.960,46.832,15.141)
N3: (-15.674,48.243,16.603)
N6: (-18.509,47.629,13.628)
N7: (-17.806,50.410,14.726)
N9: (-16.235,50.588,16.314)
O5': (-13.064,52.567,14.572)
O3': (-11.955,50.857,18.304)
Image (generated by PyMOL):