Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1374:X3
Extra
PDB:
ATOM 1 O3' A A1373 188.822 112.437 -6.555 1.00 69.98 O
ATOM 2 P C A1374 188.777 111.802 -5.084 1.00 74.20 P
ATOM 3 OP1 C A1374 187.922 110.583 -5.113 1.00 73.01 O
ATOM 4 OP2 C A1374 188.444 112.929 -4.178 1.00 76.02 O
ATOM 5 O5' C A1374 190.272 111.306 -4.802 1.00 77.50 O
ATOM 6 C5' C A1374 191.418 111.997 -5.354 1.00 80.30 C
ATOM 7 C4' C A1374 192.704 111.334 -4.900 1.00 82.63 C
ATOM 8 O4' C A1374 192.915 111.580 -3.490 1.00 85.46 O
ATOM 9 C3' C A1374 192.784 109.818 -5.046 1.00 83.58 C
ATOM 10 O3' C A1374 193.122 109.417 -6.387 1.00 81.05 O
ATOM 11 C2' C A1374 193.778 109.396 -3.967 1.00 86.24 C
ATOM 12 O2' C A1374 195.137 109.414 -4.345 1.00 89.01 O
ATOM 13 C1' C A1374 193.559 110.466 -2.895 1.00 88.54 C
ATOM 14 N1 C A1374 192.783 110.043 -1.710 1.00 93.82 N
ATOM 15 C2 C A1374 192.708 110.921 -0.601 1.00 96.16 C
ATOM 16 O2 C A1374 193.309 112.013 -0.644 1.00 96.96 O
ATOM 17 N3 C A1374 191.986 110.551 0.484 1.00 98.30 N
ATOM 18 C4 C A1374 191.361 109.367 0.501 1.00 98.95 C
ATOM 19 N4 C A1374 190.646 109.055 1.590 1.00100.41 N
ATOM 20 C5 C A1374 191.436 108.452 -0.599 1.00 97.60 C
ATOM 21 C6 C A1374 192.145 108.829 -1.673 1.00 95.31 C
ATOM 22 P A A1375 194.490 109.930 -7.086 1.00 78.46 P
ATOM 23 OP1 A A1375 195.289 108.697 -7.357 1.00 76.59 O
ATOM 24 OP2 A A1375 195.098 111.081 -6.337 1.00 77.52 O
ATOM 25 O5' A A1375 193.980 110.487 -8.468 1.00 74.85 O
TER
ATOM 1 O3' G B 2 188.451 100.159 -0.416 1.00115.32 O
ATOM 2 P A B 3 187.954 101.676 -0.534 1.00 66.01 P
ATOM 3 OP1 A B 3 186.477 101.679 -0.434 1.00 66.81 O
ATOM 4 OP2 A B 3 188.616 102.282 -1.710 1.00 64.60 O
ATOM 5 O5' A B 3 188.564 102.356 0.780 1.00 68.75 O
ATOM 6 C5' A B 3 188.394 101.734 2.048 1.00 72.99 C
ATOM 7 C4' A B 3 188.754 102.690 3.171 1.00 75.85 C
ATOM 8 O4' A B 3 190.173 102.986 3.116 1.00 76.84 O
ATOM 9 C3' A B 3 188.049 104.039 3.115 1.00 77.04 C
ATOM 10 O3' A B 3 187.860 104.543 4.432 1.00 76.37 O
ATOM 11 C2' A B 3 189.037 104.892 2.327 1.00 77.78 C
ATOM 12 O2' A B 3 188.915 106.269 2.623 1.00 77.09 O
ATOM 13 C1' A B 3 190.370 104.359 2.840 1.00 78.62 C
ATOM 14 N9 A B 3 191.458 104.484 1.874 1.00 81.10 N
ATOM 15 C8 A B 3 191.443 104.099 0.562 1.00 81.68 C
ATOM 16 N7 A B 3 192.567 104.334 -0.071 1.00 81.03 N
ATOM 17 C5 A B 3 193.377 104.914 0.892 1.00 81.55 C
ATOM 18 C6 A B 3 194.700 105.396 0.855 1.00 81.54 C
ATOM 19 N6 A B 3 195.465 105.363 -0.241 1.00 81.21 N
ATOM 20 N1 A B 3 195.208 105.914 1.992 1.00 80.74 N
ATOM 21 C2 A B 3 194.439 105.945 3.087 1.00 81.28 C
ATOM 22 N3 A B 3 193.185 105.523 3.243 1.00 83.21 N
ATOM 23 C4 A B 3 192.708 105.014 2.097 1.00 81.98 C
TER
ATOM 2 P C A1374 188.777 111.802 -5.084 1.00 74.20 P
ATOM 3 OP1 C A1374 187.922 110.583 -5.113 1.00 73.01 O
ATOM 4 OP2 C A1374 188.444 112.929 -4.178 1.00 76.02 O
ATOM 5 O5' C A1374 190.272 111.306 -4.802 1.00 77.50 O
ATOM 6 C5' C A1374 191.418 111.997 -5.354 1.00 80.30 C
ATOM 7 C4' C A1374 192.704 111.334 -4.900 1.00 82.63 C
ATOM 8 O4' C A1374 192.915 111.580 -3.490 1.00 85.46 O
ATOM 9 C3' C A1374 192.784 109.818 -5.046 1.00 83.58 C
ATOM 10 O3' C A1374 193.122 109.417 -6.387 1.00 81.05 O
ATOM 11 C2' C A1374 193.778 109.396 -3.967 1.00 86.24 C
ATOM 12 O2' C A1374 195.137 109.414 -4.345 1.00 89.01 O
ATOM 13 C1' C A1374 193.559 110.466 -2.895 1.00 88.54 C
ATOM 14 N1 C A1374 192.783 110.043 -1.710 1.00 93.82 N
ATOM 15 C2 C A1374 192.708 110.921 -0.601 1.00 96.16 C
ATOM 16 O2 C A1374 193.309 112.013 -0.644 1.00 96.96 O
ATOM 17 N3 C A1374 191.986 110.551 0.484 1.00 98.30 N
ATOM 18 C4 C A1374 191.361 109.367 0.501 1.00 98.95 C
ATOM 19 N4 C A1374 190.646 109.055 1.590 1.00100.41 N
ATOM 20 C5 C A1374 191.436 108.452 -0.599 1.00 97.60 C
ATOM 21 C6 C A1374 192.145 108.829 -1.673 1.00 95.31 C
ATOM 22 P A A1375 194.490 109.930 -7.086 1.00 78.46 P
ATOM 23 OP1 A A1375 195.289 108.697 -7.357 1.00 76.59 O
ATOM 24 OP2 A A1375 195.098 111.081 -6.337 1.00 77.52 O
ATOM 25 O5' A A1375 193.980 110.487 -8.468 1.00 74.85 O
TER
ATOM 1 O3' G B 2 188.451 100.159 -0.416 1.00115.32 O
ATOM 2 P A B 3 187.954 101.676 -0.534 1.00 66.01 P
ATOM 3 OP1 A B 3 186.477 101.679 -0.434 1.00 66.81 O
ATOM 4 OP2 A B 3 188.616 102.282 -1.710 1.00 64.60 O
ATOM 5 O5' A B 3 188.564 102.356 0.780 1.00 68.75 O
ATOM 6 C5' A B 3 188.394 101.734 2.048 1.00 72.99 C
ATOM 7 C4' A B 3 188.754 102.690 3.171 1.00 75.85 C
ATOM 8 O4' A B 3 190.173 102.986 3.116 1.00 76.84 O
ATOM 9 C3' A B 3 188.049 104.039 3.115 1.00 77.04 C
ATOM 10 O3' A B 3 187.860 104.543 4.432 1.00 76.37 O
ATOM 11 C2' A B 3 189.037 104.892 2.327 1.00 77.78 C
ATOM 12 O2' A B 3 188.915 106.269 2.623 1.00 77.09 O
ATOM 13 C1' A B 3 190.370 104.359 2.840 1.00 78.62 C
ATOM 14 N9 A B 3 191.458 104.484 1.874 1.00 81.10 N
ATOM 15 C8 A B 3 191.443 104.099 0.562 1.00 81.68 C
ATOM 16 N7 A B 3 192.567 104.334 -0.071 1.00 81.03 N
ATOM 17 C5 A B 3 193.377 104.914 0.892 1.00 81.55 C
ATOM 18 C6 A B 3 194.700 105.396 0.855 1.00 81.54 C
ATOM 19 N6 A B 3 195.465 105.363 -0.241 1.00 81.21 N
ATOM 20 N1 A B 3 195.208 105.914 1.992 1.00 80.74 N
ATOM 21 C2 A B 3 194.439 105.945 3.087 1.00 81.28 C
ATOM 22 N3 A B 3 193.185 105.523 3.243 1.00 83.21 N
ATOM 23 C4 A B 3 192.708 105.014 2.097 1.00 81.98 C
TER
Atoms:
C2: (192.708,110.921,-0.601)
OP1: (187.922,110.583,-5.113)
OP2: (188.444,112.929,-4.178)
C4: (191.361,109.367,0.501)
O5': (190.272,111.306,-4.802)
C3': (192.784,109.818,-5.046)
C1': (193.559,110.466,-2.895)
O4': (192.915,111.580,-3.490)
C5': (191.418,111.997,-5.354)
P: (188.777,111.802,-5.084)
O2: (193.309,112.013,-0.644)
C4': (192.704,111.334,-4.900)
C2': (193.778,109.396,-3.967)
O2': (195.137,109.414,-4.345)
N1: (192.783,110.043,-1.710)
N3: (191.986,110.551,0.484)
N4: (190.646,109.055,1.590)
C6: (192.145,108.829,-1.673)
C5: (191.436,108.452,-0.599)
O3': (193.122,109.417,-6.387)
OP1: (187.922,110.583,-5.113)
OP2: (188.444,112.929,-4.178)
C4: (191.361,109.367,0.501)
O5': (190.272,111.306,-4.802)
C3': (192.784,109.818,-5.046)
C1': (193.559,110.466,-2.895)
O4': (192.915,111.580,-3.490)
C5': (191.418,111.997,-5.354)
P: (188.777,111.802,-5.084)
O2: (193.309,112.013,-0.644)
C4': (192.704,111.334,-4.900)
C2': (193.778,109.396,-3.967)
O2': (195.137,109.414,-4.345)
N1: (192.783,110.043,-1.710)
N3: (191.986,110.551,0.484)
N4: (190.646,109.055,1.590)
C6: (192.145,108.829,-1.673)
C5: (191.436,108.452,-0.599)
O3': (193.122,109.417,-6.387)
OP1: (186.477,101.679,-0.434)
OP2: (188.616,102.282,-1.710)
C3': (188.049,104.039,3.115)
C1': (190.370,104.359,2.840)
C5': (188.394,101.734,2.048)
O4': (190.173,102.986,3.116)
C8: (191.443,104.099,0.562)
O2': (188.915,106.269,2.623)
C6: (194.700,105.396,0.855)
C5: (193.377,104.914,0.892)
C4: (192.708,105.014,2.097)
P: (187.954,101.676,-0.534)
C4': (188.754,102.690,3.171)
C2': (189.037,104.892,2.327)
C2: (194.439,105.945,3.087)
N1: (195.208,105.914,1.992)
N3: (193.185,105.523,3.243)
N6: (195.465,105.363,-0.241)
N7: (192.567,104.334,-0.071)
N9: (191.458,104.484,1.874)
O5': (188.564,102.356,0.780)
O3': (187.860,104.543,4.432)
OP2: (188.616,102.282,-1.710)
C3': (188.049,104.039,3.115)
C1': (190.370,104.359,2.840)
C5': (188.394,101.734,2.048)
O4': (190.173,102.986,3.116)
C8: (191.443,104.099,0.562)
O2': (188.915,106.269,2.623)
C6: (194.700,105.396,0.855)
C5: (193.377,104.914,0.892)
C4: (192.708,105.014,2.097)
P: (187.954,101.676,-0.534)
C4': (188.754,102.690,3.171)
C2': (189.037,104.892,2.327)
C2: (194.439,105.945,3.087)
N1: (195.208,105.914,1.992)
N3: (193.185,105.523,3.243)
N6: (195.465,105.363,-0.241)
N7: (192.567,104.334,-0.071)
N9: (191.458,104.484,1.874)
O5': (188.564,102.356,0.780)
O3': (187.860,104.543,4.432)
Image (generated by PyMOL):