Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:135:136
Extra
PDB:
ATOM 1 O3' U A 34 44.340 -21.234 85.986 1.00 32.32 O
ATOM 2 P U A 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 3 OP1 U A 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 4 OP2 U A 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 5 O5' U A 35 44.120 -23.522 85.177 1.00 32.61 O
ATOM 6 C5' U A 35 45.375 -24.027 84.838 1.00 32.66 C
ATOM 7 C4' U A 35 45.426 -25.461 85.207 1.00 32.84 C
ATOM 8 O4' U A 35 45.024 -25.579 86.590 1.00 33.01 O
ATOM 9 C3' U A 35 44.433 -26.315 84.511 1.00 32.81 C
ATOM 10 O3' U A 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 11 C2' U A 35 44.283 -27.486 85.464 1.00 33.05 C
ATOM 12 O2' U A 35 45.359 -28.344 85.342 1.00 33.17 O
ATOM 13 C1' U A 35 44.375 -26.792 86.814 1.00 33.14 C
ATOM 14 N1 U A 35 43.044 -26.508 87.368 1.00 33.15 N
ATOM 15 C2 U A 35 42.331 -27.556 87.893 1.00 33.32 C
ATOM 16 O2 U A 35 42.827 -28.677 87.991 1.00 33.47 O
ATOM 17 N3 U A 35 41.054 -27.255 88.313 1.00 33.32 N
ATOM 18 C4 U A 35 40.406 -26.038 88.235 1.00 33.17 C
ATOM 19 O4 U A 35 39.249 -25.916 88.657 1.00 33.20 O
ATOM 20 C5 U A 35 41.188 -25.004 87.656 1.00 33.00 C
ATOM 21 C6 U A 35 42.445 -25.276 87.260 1.00 33.00 C
ATOM 22 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 23 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 24 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 25 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
TER
ATOM 1 O3' U B 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 2 P A B 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 3 OP1 A B 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 4 OP2 A B 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 5 O5' A B 36 42.801 -27.838 82.224 1.00 34.58 O
ATOM 6 C5' A B 36 43.275 -29.132 81.954 1.00 34.71 C
ATOM 7 C4' A B 36 42.543 -30.149 82.767 1.00 34.91 C
ATOM 8 O4' A B 36 42.145 -29.560 84.004 1.00 34.96 O
ATOM 9 C3' A B 36 41.245 -30.612 82.191 1.00 34.89 C
ATOM 10 O3' A B 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 11 C2' A B 36 40.496 -31.153 83.402 1.00 35.07 C
ATOM 12 O2' A B 36 40.950 -32.452 83.722 1.00 35.29 O
ATOM 13 C1' A B 36 40.987 -30.213 84.487 1.00 35.07 C
ATOM 14 N9 A B 36 39.992 -29.216 84.889 1.00 34.98 N
ATOM 15 C8 A B 36 39.920 -27.953 84.414 1.00 34.78 C
ATOM 16 N7 A B 36 38.907 -27.329 84.921 1.00 34.76 N
ATOM 17 C5 A B 36 38.305 -28.158 85.773 1.00 34.95 C
ATOM 18 C6 A B 36 37.194 -27.954 86.538 1.00 35.02 C
ATOM 19 N6 A B 36 36.551 -26.786 86.558 1.00 34.90 N
ATOM 20 N1 A B 36 36.793 -28.992 87.285 1.00 35.24 N
ATOM 21 C2 A B 36 37.488 -30.124 87.195 1.00 35.36 C
ATOM 22 N3 A B 36 38.573 -30.421 86.474 1.00 35.31 N
ATOM 23 C4 A B 36 38.949 -29.357 85.773 1.00 35.10 C
ATOM 24 P A B 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 25 OP1 A B 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 26 OP2 A B 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 27 O5' A B 37 39.945 -30.432 79.550 1.00 31.29 O
TER
ATOM 2 P U A 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 3 OP1 U A 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 4 OP2 U A 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 5 O5' U A 35 44.120 -23.522 85.177 1.00 32.61 O
ATOM 6 C5' U A 35 45.375 -24.027 84.838 1.00 32.66 C
ATOM 7 C4' U A 35 45.426 -25.461 85.207 1.00 32.84 C
ATOM 8 O4' U A 35 45.024 -25.579 86.590 1.00 33.01 O
ATOM 9 C3' U A 35 44.433 -26.315 84.511 1.00 32.81 C
ATOM 10 O3' U A 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 11 C2' U A 35 44.283 -27.486 85.464 1.00 33.05 C
ATOM 12 O2' U A 35 45.359 -28.344 85.342 1.00 33.17 O
ATOM 13 C1' U A 35 44.375 -26.792 86.814 1.00 33.14 C
ATOM 14 N1 U A 35 43.044 -26.508 87.368 1.00 33.15 N
ATOM 15 C2 U A 35 42.331 -27.556 87.893 1.00 33.32 C
ATOM 16 O2 U A 35 42.827 -28.677 87.991 1.00 33.47 O
ATOM 17 N3 U A 35 41.054 -27.255 88.313 1.00 33.32 N
ATOM 18 C4 U A 35 40.406 -26.038 88.235 1.00 33.17 C
ATOM 19 O4 U A 35 39.249 -25.916 88.657 1.00 33.20 O
ATOM 20 C5 U A 35 41.188 -25.004 87.656 1.00 33.00 C
ATOM 21 C6 U A 35 42.445 -25.276 87.260 1.00 33.00 C
ATOM 22 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 23 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 24 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 25 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
TER
ATOM 1 O3' U B 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 2 P A B 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 3 OP1 A B 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 4 OP2 A B 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 5 O5' A B 36 42.801 -27.838 82.224 1.00 34.58 O
ATOM 6 C5' A B 36 43.275 -29.132 81.954 1.00 34.71 C
ATOM 7 C4' A B 36 42.543 -30.149 82.767 1.00 34.91 C
ATOM 8 O4' A B 36 42.145 -29.560 84.004 1.00 34.96 O
ATOM 9 C3' A B 36 41.245 -30.612 82.191 1.00 34.89 C
ATOM 10 O3' A B 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 11 C2' A B 36 40.496 -31.153 83.402 1.00 35.07 C
ATOM 12 O2' A B 36 40.950 -32.452 83.722 1.00 35.29 O
ATOM 13 C1' A B 36 40.987 -30.213 84.487 1.00 35.07 C
ATOM 14 N9 A B 36 39.992 -29.216 84.889 1.00 34.98 N
ATOM 15 C8 A B 36 39.920 -27.953 84.414 1.00 34.78 C
ATOM 16 N7 A B 36 38.907 -27.329 84.921 1.00 34.76 N
ATOM 17 C5 A B 36 38.305 -28.158 85.773 1.00 34.95 C
ATOM 18 C6 A B 36 37.194 -27.954 86.538 1.00 35.02 C
ATOM 19 N6 A B 36 36.551 -26.786 86.558 1.00 34.90 N
ATOM 20 N1 A B 36 36.793 -28.992 87.285 1.00 35.24 N
ATOM 21 C2 A B 36 37.488 -30.124 87.195 1.00 35.36 C
ATOM 22 N3 A B 36 38.573 -30.421 86.474 1.00 35.31 N
ATOM 23 C4 A B 36 38.949 -29.357 85.773 1.00 35.10 C
ATOM 24 P A B 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 25 OP1 A B 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 26 OP2 A B 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 27 O5' A B 37 39.945 -30.432 79.550 1.00 31.29 O
TER
Atoms:
C4: (40.406,-26.038,88.235)
N3: (41.054,-27.255,88.313)
OP1: (44.290,-21.642,83.534)
OP2: (42.192,-21.956,84.961)
C2: (42.331,-27.556,87.893)
C1': (44.375,-26.792,86.814)
C3': (44.433,-26.315,84.511)
O5': (44.120,-23.522,85.177)
O4': (45.024,-25.579,86.590)
C5': (45.375,-24.027,84.838)
P: (43.681,-22.066,84.811)
C4': (45.426,-25.461,85.207)
C2': (44.283,-27.486,85.464)
O2': (45.359,-28.344,85.342)
N1: (43.044,-26.508,87.368)
O4: (39.249,-25.916,88.657)
O2: (42.827,-28.677,87.991)
C6: (42.445,-25.276,87.260)
C5: (41.188,-25.004,87.656)
O3': (44.801,-26.656,83.196)
N3: (41.054,-27.255,88.313)
OP1: (44.290,-21.642,83.534)
OP2: (42.192,-21.956,84.961)
C2: (42.331,-27.556,87.893)
C1': (44.375,-26.792,86.814)
C3': (44.433,-26.315,84.511)
O5': (44.120,-23.522,85.177)
O4': (45.024,-25.579,86.590)
C5': (45.375,-24.027,84.838)
P: (43.681,-22.066,84.811)
C4': (45.426,-25.461,85.207)
C2': (44.283,-27.486,85.464)
O2': (45.359,-28.344,85.342)
N1: (43.044,-26.508,87.368)
O4: (39.249,-25.916,88.657)
O2: (42.827,-28.677,87.991)
C6: (42.445,-25.276,87.260)
C5: (41.188,-25.004,87.656)
O3': (44.801,-26.656,83.196)
OP1: (44.434,-26.650,80.724)
OP2: (42.887,-25.373,82.292)
C3': (41.245,-30.612,82.191)
C1': (40.987,-30.213,84.487)
C5': (43.275,-29.132,81.954)
O4': (42.145,-29.560,84.004)
C8: (39.920,-27.953,84.414)
O2': (40.950,-32.452,83.722)
C6: (37.194,-27.954,86.538)
C5: (38.305,-28.158,85.773)
C4: (38.949,-29.357,85.773)
P: (43.707,-26.560,82.010)
C4': (42.543,-30.149,82.767)
C2': (40.496,-31.153,83.402)
C2: (37.488,-30.124,87.195)
N1: (36.793,-28.992,87.285)
N3: (38.573,-30.421,86.474)
N6: (36.551,-26.786,86.558)
N7: (38.907,-27.329,84.921)
N9: (39.992,-29.216,84.889)
O5': (42.801,-27.838,82.224)
O3': (41.420,-31.549,81.161)
OP2: (42.887,-25.373,82.292)
C3': (41.245,-30.612,82.191)
C1': (40.987,-30.213,84.487)
C5': (43.275,-29.132,81.954)
O4': (42.145,-29.560,84.004)
C8: (39.920,-27.953,84.414)
O2': (40.950,-32.452,83.722)
C6: (37.194,-27.954,86.538)
C5: (38.305,-28.158,85.773)
C4: (38.949,-29.357,85.773)
P: (43.707,-26.560,82.010)
C4': (42.543,-30.149,82.767)
C2': (40.496,-31.153,83.402)
C2: (37.488,-30.124,87.195)
N1: (36.793,-28.992,87.285)
N3: (38.573,-30.421,86.474)
N6: (36.551,-26.786,86.558)
N7: (38.907,-27.329,84.921)
N9: (39.992,-29.216,84.889)
O5': (42.801,-27.838,82.224)
O3': (41.420,-31.549,81.161)
Image (generated by PyMOL):