ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1343:A1344

Extra

PDB:
ATOM 1 O3' A A1342 15.099 -61.093 -19.035 1.00 40.80 O
ATOM 2 P U A1343 14.343 -59.705 -18.722 1.00 50.53 P
ATOM 3 OP1 U A1343 15.303 -58.823 -18.017 1.00 53.97 O
ATOM 4 OP2 U A1343 13.068 -60.047 -18.050 1.00 49.34 O
ATOM 5 O5' U A1343 14.058 -59.126 -20.173 1.00 38.53 O
ATOM 6 C5' U A1343 15.118 -58.931 -21.093 1.00 37.20 C
ATOM 7 C4' U A1343 14.683 -58.105 -22.278 1.00 36.26 C
ATOM 8 O4' U A1343 13.556 -58.743 -22.916 1.00 51.69 O
ATOM 9 C3' U A1343 14.209 -56.700 -21.962 1.00 34.77 C
ATOM 10 O3' U A1343 15.265 -55.784 -21.958 1.00 31.59 O
ATOM 11 C2' U A1343 13.205 -56.416 -23.054 1.00 42.83 C
ATOM 12 O2' U A1343 13.890 -56.045 -24.243 1.00 49.24 O
ATOM 13 C1' U A1343 12.588 -57.790 -23.271 1.00 47.77 C
ATOM 14 N1 U A1343 11.390 -58.026 -22.438 1.00 45.63 N
ATOM 15 C2 U A1343 10.545 -58.980 -22.964 1.00 46.51 C
ATOM 16 O2 U A1343 10.752 -59.526 -24.028 1.00 47.66 O
ATOM 17 N3 U A1343 9.432 -59.271 -22.230 1.00 54.58 N
ATOM 18 C4 U A1343 9.082 -58.712 -21.022 1.00 57.55 C
ATOM 19 O4 U A1343 8.019 -59.094 -20.505 1.00 55.07 O
ATOM 20 C5 U A1343 10.026 -57.734 -20.521 1.00 51.82 C
ATOM 21 C6 U A1343 11.132 -57.428 -21.223 1.00 45.59 C
ATOM 22 P A A1344 15.487 -54.844 -20.700 1.00 37.08 P
ATOM 23 OP1 A A1344 16.901 -54.454 -20.718 1.00 56.59 O
ATOM 24 OP2 A A1344 14.964 -55.568 -19.509 1.00 36.25 O
ATOM 25 O5' A A1344 14.576 -53.580 -21.032 1.00 33.80 O
TER

ATOM 1 O3' U B1343 15.265 -55.784 -21.958 1.00 31.59 O
ATOM 2 P A B1344 15.487 -54.844 -20.700 1.00 37.08 P
ATOM 3 OP1 A B1344 16.901 -54.454 -20.718 1.00 56.59 O
ATOM 4 OP2 A B1344 14.964 -55.568 -19.509 1.00 36.25 O
ATOM 5 O5' A B1344 14.576 -53.580 -21.032 1.00 33.80 O
ATOM 6 C5' A B1344 13.278 -53.437 -20.478 1.00 42.40 C
ATOM 7 C4' A B1344 12.286 -52.940 -21.507 1.00 41.65 C
ATOM 8 O4' A B1344 11.422 -54.017 -21.919 1.00 51.49 O
ATOM 9 C3' A B1344 11.357 -51.820 -21.051 1.00 34.55 C
ATOM 10 O3' A B1344 11.843 -50.558 -21.453 1.00 40.63 O
ATOM 11 C2' A B1344 9.991 -52.137 -21.680 1.00 43.01 C
ATOM 12 O2' A B1344 9.685 -51.194 -22.691 1.00 56.41 O
ATOM 13 C1' A B1344 10.186 -53.507 -22.327 1.00 45.39 C
ATOM 14 N9 A B1344 9.117 -54.473 -21.994 1.00 41.04 N
ATOM 15 C8 A B1344 8.411 -54.697 -20.848 1.00 43.89 C
ATOM 16 N7 A B1344 7.537 -55.670 -20.956 1.00 43.52 N
ATOM 17 C5 A B1344 7.674 -56.118 -22.253 1.00 43.32 C
ATOM 18 C6 A B1344 7.037 -57.133 -22.980 1.00 49.02 C
ATOM 19 N6 A B1344 6.085 -57.911 -22.464 1.00 58.78 N
ATOM 20 N1 A B1344 7.405 -57.326 -24.263 1.00 41.12 N
ATOM 21 C2 A B1344 8.370 -56.536 -24.747 1.00 50.97 C
ATOM 22 N3 A B1344 9.060 -55.549 -24.168 1.00 48.85 N
ATOM 23 C4 A B1344 8.647 -55.392 -22.898 1.00 43.79 C
ATOM 24 P U B1345 12.270 -49.444 -20.383 1.00 46.80 P
ATOM 25 OP1 U B1345 13.677 -49.081 -20.677 1.00 63.15 O
ATOM 26 OP2 U B1345 11.929 -49.957 -19.037 1.00 45.56 O
ATOM 27 O5' U B1345 11.334 -48.229 -20.757 1.00 43.20 O
TER

Atoms:
C4: (9.082,-58.712,-21.022)
N3: (9.432,-59.271,-22.230)
OP1: (15.303,-58.823,-18.017)
OP2: (13.068,-60.047,-18.050)
C2: (10.545,-58.980,-22.964)
C1': (12.588,-57.790,-23.271)
C3': (14.209,-56.700,-21.962)
O5': (14.058,-59.126,-20.173)
O4': (13.556,-58.743,-22.916)
C5': (15.118,-58.931,-21.093)
P: (14.343,-59.705,-18.722)
C4': (14.683,-58.105,-22.278)
C2': (13.205,-56.416,-23.054)
O2': (13.890,-56.045,-24.243)
N1: (11.390,-58.026,-22.438)
O4: (8.019,-59.094,-20.505)
O2: (10.752,-59.526,-24.028)
C6: (11.132,-57.428,-21.223)
C5: (10.026,-57.734,-20.521)
O3': (15.265,-55.784,-21.958)
OP1: (16.901,-54.454,-20.718)
OP2: (14.964,-55.568,-19.509)
C3': (11.357,-51.820,-21.051)
C1': (10.186,-53.507,-22.327)
C5': (13.278,-53.437,-20.478)
O4': (11.422,-54.017,-21.919)
C8: (8.411,-54.697,-20.848)
O2': (9.685,-51.194,-22.691)
C6: (7.037,-57.133,-22.980)
C5: (7.674,-56.118,-22.253)
C4: (8.647,-55.392,-22.898)
P: (15.487,-54.844,-20.700)
C4': (12.286,-52.940,-21.507)
C2': (9.991,-52.137,-21.680)
C2: (8.370,-56.536,-24.747)
N1: (7.405,-57.326,-24.263)
N3: (9.060,-55.549,-24.168)
N6: (6.085,-57.911,-22.464)
N7: (7.537,-55.670,-20.956)
N9: (9.117,-54.473,-21.994)
O5': (14.576,-53.580,-21.032)
O3': (11.843,-50.558,-21.453)
Image (generated by PyMOL):
PyMOL image
show in jmol