ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01394:01351

Extra

PDB:
ATOM 1 O3' A A1393 46.463 173.275 77.186 1.00 42.23 O
ATOM 2 P U A1394 46.391 173.185 75.583 1.00 40.15 P
ATOM 3 OP1 U A1394 44.956 173.347 75.238 1.00 39.96 O
ATOM 4 OP2 U A1394 47.138 172.006 75.082 1.00 38.83 O
ATOM 5 O5' U A1394 47.176 174.489 75.126 1.00 41.77 O
ATOM 6 C5' U A1394 46.993 175.061 73.819 1.00 41.26 C
ATOM 7 C4' U A1394 47.494 176.481 73.815 1.00 41.45 C
ATOM 8 O4' U A1394 46.697 177.251 74.756 1.00 42.75 O
ATOM 9 C3' U A1394 48.943 176.654 74.259 1.00 42.55 C
ATOM 10 O3' U A1394 49.514 177.762 73.581 1.00 43.07 O
ATOM 11 C2' U A1394 48.801 176.943 75.750 1.00 41.83 C
ATOM 12 O2' U A1394 49.903 177.631 76.307 1.00 40.46 O
ATOM 13 C1' U A1394 47.526 177.784 75.769 1.00 41.84 C
ATOM 14 N1 U A1394 46.773 177.733 77.030 1.00 43.55 N
ATOM 15 C2 U A1394 46.305 178.927 77.553 1.00 43.86 C
ATOM 16 O2 U A1394 46.492 180.004 77.019 1.00 46.47 O
ATOM 17 N3 U A1394 45.606 178.809 78.728 1.00 43.26 N
ATOM 18 C4 U A1394 45.326 177.643 79.414 1.00 42.83 C
ATOM 19 O4 U A1394 44.678 177.697 80.454 1.00 43.81 O
ATOM 20 C5 U A1394 45.841 176.455 78.814 1.00 42.68 C
ATOM 21 C6 U A1394 46.529 176.535 77.674 1.00 43.68 C
ATOM 22 P C A1395 50.582 177.507 72.416 1.00 46.08 P
ATOM 23 OP1 C A1395 51.004 178.844 71.916 1.00 46.36 O
ATOM 24 OP2 C A1395 50.006 176.516 71.464 1.00 45.81 O
ATOM 25 O5' C A1395 51.802 176.817 73.171 1.00 42.72 O
TER

ATOM 1 O3' G B1350 41.384 178.173 84.159 1.00 49.70 O
ATOM 2 P A B1351 42.462 179.066 84.952 1.00 49.94 P
ATOM 3 OP1 A B1351 42.290 178.752 86.390 1.00 51.50 O
ATOM 4 OP2 A B1351 42.348 180.475 84.486 1.00 52.09 O
ATOM 5 O5' A B1351 43.882 178.497 84.499 1.00 50.57 O
ATOM 6 C5' A B1351 44.174 177.096 84.598 1.00 46.97 C
ATOM 7 C4' A B1351 45.662 176.867 84.695 1.00 45.68 C
ATOM 8 O4' A B1351 46.289 177.231 83.433 1.00 46.09 O
ATOM 9 C3' A B1351 46.406 177.640 85.784 1.00 45.01 C
ATOM 10 O3' A B1351 47.350 176.781 86.412 1.00 47.18 O
ATOM 11 C2' A B1351 47.132 178.730 84.994 1.00 44.49 C
ATOM 12 O2' A B1351 48.341 179.135 85.594 1.00 45.11 O
ATOM 13 C1' A B1351 47.449 177.995 83.699 1.00 45.21 C
ATOM 14 N9 A B1351 47.762 178.821 82.529 1.00 44.24 N
ATOM 15 C8 A B1351 47.410 180.121 82.260 1.00 43.79 C
ATOM 16 N7 A B1351 47.831 180.550 81.094 1.00 45.30 N
ATOM 17 C5 A B1351 48.510 179.464 80.562 1.00 44.10 C
ATOM 18 C6 A B1351 49.184 179.268 79.343 1.00 45.23 C
ATOM 19 N6 A B1351 49.273 180.185 78.385 1.00 44.09 N
ATOM 20 N1 A B1351 49.769 178.069 79.134 1.00 46.63 N
ATOM 21 C2 A B1351 49.668 177.137 80.079 1.00 44.69 C
ATOM 22 N3 A B1351 49.054 177.196 81.254 1.00 45.68 N
ATOM 23 C4 A B1351 48.488 178.399 81.439 1.00 44.90 C
ATOM 24 P A B1352 47.022 176.171 87.868 1.00 50.94 P
ATOM 25 OP1 A B1352 46.398 174.832 87.681 1.00 49.44 O
ATOM 26 OP2 A B1352 46.309 177.221 88.652 1.00 48.33 O
ATOM 27 O5' A B1352 48.445 175.955 88.542 1.00 48.67 O
TER

Atoms:
C4: (45.326,177.643,79.414)
N3: (45.606,178.809,78.728)
OP1: (44.956,173.347,75.238)
OP2: (47.138,172.006,75.082)
C2: (46.305,178.927,77.553)
C1': (47.526,177.784,75.769)
C3': (48.943,176.654,74.259)
O5': (47.176,174.489,75.126)
O4': (46.697,177.251,74.756)
C5': (46.993,175.061,73.819)
P: (46.391,173.185,75.583)
C4': (47.494,176.481,73.815)
C2': (48.801,176.943,75.750)
O2': (49.903,177.631,76.307)
N1: (46.773,177.733,77.030)
O4: (44.678,177.697,80.454)
O2: (46.492,180.004,77.019)
C6: (46.529,176.535,77.674)
C5: (45.841,176.455,78.814)
O3': (49.514,177.762,73.581)
OP1: (42.290,178.752,86.390)
OP2: (42.348,180.475,84.486)
C3': (46.406,177.640,85.784)
C1': (47.449,177.995,83.699)
C5': (44.174,177.096,84.598)
O4': (46.289,177.231,83.433)
C8: (47.410,180.121,82.260)
O2': (48.341,179.135,85.594)
C6: (49.184,179.268,79.343)
C5: (48.510,179.464,80.562)
C4: (48.488,178.399,81.439)
P: (42.462,179.066,84.952)
C4': (45.662,176.867,84.695)
C2': (47.132,178.730,84.994)
C2: (49.668,177.137,80.079)
N1: (49.769,178.069,79.134)
N3: (49.054,177.196,81.254)
N6: (49.273,180.185,78.385)
N7: (47.831,180.550,81.094)
N9: (47.762,178.821,82.529)
O5': (43.882,178.497,84.499)
O3': (47.350,176.781,86.412)
Image (generated by PyMOL):
PyMOL image
show in jmol