Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 2 P G A 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 3 OP1 G A 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 4 OP2 G A 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 5 O5' G A 42 1.388 51.093 7.042 1.00 32.11 O
ATOM 6 C5' G A 42 1.627 51.280 8.439 1.00 33.50 C
ATOM 7 C4' G A 42 1.793 49.944 9.151 1.00 34.17 C
ATOM 8 O4' G A 42 0.667 49.075 8.843 1.00 34.08 O
ATOM 9 C3' G A 42 3.037 49.150 8.774 1.00 34.68 C
ATOM 10 O3' G A 42 3.459 48.378 9.891 1.00 36.25 O
ATOM 11 C2' G A 42 2.511 48.281 7.630 1.00 34.33 C
ATOM 12 O2' G A 42 3.260 47.102 7.420 1.00 34.98 O
ATOM 13 C1' G A 42 1.098 47.950 8.104 1.00 33.32 C
ATOM 14 N9 G A 42 0.189 47.737 6.986 1.00 32.50 N
ATOM 15 C8 G A 42 -0.672 48.643 6.422 1.00 32.32 C
ATOM 16 N7 G A 42 -1.353 48.164 5.418 1.00 32.01 N
ATOM 17 C5 G A 42 -0.911 46.853 5.306 1.00 32.17 C
ATOM 18 C6 G A 42 -1.281 45.826 4.398 1.00 31.97 C
ATOM 19 O6 G A 42 -2.104 45.869 3.475 1.00 32.17 O
ATOM 20 N1 G A 42 -0.589 44.641 4.636 1.00 31.92 N
ATOM 21 C2 G A 42 0.346 44.464 5.627 1.00 32.16 C
ATOM 22 N2 G A 42 0.915 43.251 5.710 1.00 32.42 N
ATOM 23 N3 G A 42 0.704 45.418 6.478 1.00 32.42 N
ATOM 24 C4 G A 42 0.039 46.579 6.264 1.00 32.31 C
ATOM 25 P G A 43 5.008 48.089 10.183 1.00 37.59 P
ATOM 26 OP1 G A 43 5.055 46.870 11.020 1.00 37.31 O
ATOM 27 OP2 G A 43 5.626 49.342 10.676 1.00 37.82 O
ATOM 28 O5' G A 43 5.616 47.715 8.745 1.00 38.61 O
TER
ATOM 1 O3' C B 40 -3.138 55.809 1.976 1.00 36.52 O
ATOM 2 P A B 41 -3.105 54.283 2.479 1.00 34.69 P
ATOM 3 OP1 A B 41 -1.733 53.770 2.254 1.00 34.76 O
ATOM 4 OP2 A B 41 -4.258 53.589 1.861 1.00 34.54 O
ATOM 5 O5' A B 41 -3.354 54.376 4.060 1.00 33.27 O
ATOM 6 C5' A B 41 -2.314 54.786 4.945 1.00 31.05 C
ATOM 7 C4' A B 41 -2.290 53.920 6.194 1.00 30.09 C
ATOM 8 O4' A B 41 -3.548 54.028 6.913 1.00 29.02 O
ATOM 9 C3' A B 41 -2.063 52.426 5.949 1.00 29.95 C
ATOM 10 O3' A B 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 11 C2' A B 41 -3.398 51.790 6.350 1.00 28.83 C
ATOM 12 O2' A B 41 -3.271 50.488 6.886 1.00 28.75 O
ATOM 13 C1' A B 41 -3.889 52.758 7.421 1.00 27.31 C
ATOM 14 N9 A B 41 -5.329 52.712 7.670 1.00 25.96 N
ATOM 15 C8 A B 41 -6.331 52.675 6.737 1.00 25.52 C
ATOM 16 N7 A B 41 -7.538 52.636 7.251 1.00 25.14 N
ATOM 17 C5 A B 41 -7.313 52.651 8.618 1.00 24.63 C
ATOM 18 C6 A B 41 -8.186 52.630 9.726 1.00 24.18 C
ATOM 19 N6 A B 41 -9.515 52.588 9.612 1.00 25.04 N
ATOM 20 N1 A B 41 -7.648 52.659 10.962 1.00 23.78 N
ATOM 21 C2 A B 41 -6.315 52.702 11.075 1.00 24.22 C
ATOM 22 N3 A B 41 -5.393 52.725 10.111 1.00 24.54 N
ATOM 23 C4 A B 41 -5.960 52.703 8.893 1.00 24.92 C
ATOM 24 P G B 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 25 OP1 G B 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 26 OP2 G B 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 27 O5' G B 42 1.388 51.093 7.042 1.00 32.11 O
TER
ATOM 2 P G A 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 3 OP1 G A 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 4 OP2 G A 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 5 O5' G A 42 1.388 51.093 7.042 1.00 32.11 O
ATOM 6 C5' G A 42 1.627 51.280 8.439 1.00 33.50 C
ATOM 7 C4' G A 42 1.793 49.944 9.151 1.00 34.17 C
ATOM 8 O4' G A 42 0.667 49.075 8.843 1.00 34.08 O
ATOM 9 C3' G A 42 3.037 49.150 8.774 1.00 34.68 C
ATOM 10 O3' G A 42 3.459 48.378 9.891 1.00 36.25 O
ATOM 11 C2' G A 42 2.511 48.281 7.630 1.00 34.33 C
ATOM 12 O2' G A 42 3.260 47.102 7.420 1.00 34.98 O
ATOM 13 C1' G A 42 1.098 47.950 8.104 1.00 33.32 C
ATOM 14 N9 G A 42 0.189 47.737 6.986 1.00 32.50 N
ATOM 15 C8 G A 42 -0.672 48.643 6.422 1.00 32.32 C
ATOM 16 N7 G A 42 -1.353 48.164 5.418 1.00 32.01 N
ATOM 17 C5 G A 42 -0.911 46.853 5.306 1.00 32.17 C
ATOM 18 C6 G A 42 -1.281 45.826 4.398 1.00 31.97 C
ATOM 19 O6 G A 42 -2.104 45.869 3.475 1.00 32.17 O
ATOM 20 N1 G A 42 -0.589 44.641 4.636 1.00 31.92 N
ATOM 21 C2 G A 42 0.346 44.464 5.627 1.00 32.16 C
ATOM 22 N2 G A 42 0.915 43.251 5.710 1.00 32.42 N
ATOM 23 N3 G A 42 0.704 45.418 6.478 1.00 32.42 N
ATOM 24 C4 G A 42 0.039 46.579 6.264 1.00 32.31 C
ATOM 25 P G A 43 5.008 48.089 10.183 1.00 37.59 P
ATOM 26 OP1 G A 43 5.055 46.870 11.020 1.00 37.31 O
ATOM 27 OP2 G A 43 5.626 49.342 10.676 1.00 37.82 O
ATOM 28 O5' G A 43 5.616 47.715 8.745 1.00 38.61 O
TER
ATOM 1 O3' C B 40 -3.138 55.809 1.976 1.00 36.52 O
ATOM 2 P A B 41 -3.105 54.283 2.479 1.00 34.69 P
ATOM 3 OP1 A B 41 -1.733 53.770 2.254 1.00 34.76 O
ATOM 4 OP2 A B 41 -4.258 53.589 1.861 1.00 34.54 O
ATOM 5 O5' A B 41 -3.354 54.376 4.060 1.00 33.27 O
ATOM 6 C5' A B 41 -2.314 54.786 4.945 1.00 31.05 C
ATOM 7 C4' A B 41 -2.290 53.920 6.194 1.00 30.09 C
ATOM 8 O4' A B 41 -3.548 54.028 6.913 1.00 29.02 O
ATOM 9 C3' A B 41 -2.063 52.426 5.949 1.00 29.95 C
ATOM 10 O3' A B 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 11 C2' A B 41 -3.398 51.790 6.350 1.00 28.83 C
ATOM 12 O2' A B 41 -3.271 50.488 6.886 1.00 28.75 O
ATOM 13 C1' A B 41 -3.889 52.758 7.421 1.00 27.31 C
ATOM 14 N9 A B 41 -5.329 52.712 7.670 1.00 25.96 N
ATOM 15 C8 A B 41 -6.331 52.675 6.737 1.00 25.52 C
ATOM 16 N7 A B 41 -7.538 52.636 7.251 1.00 25.14 N
ATOM 17 C5 A B 41 -7.313 52.651 8.618 1.00 24.63 C
ATOM 18 C6 A B 41 -8.186 52.630 9.726 1.00 24.18 C
ATOM 19 N6 A B 41 -9.515 52.588 9.612 1.00 25.04 N
ATOM 20 N1 A B 41 -7.648 52.659 10.962 1.00 23.78 N
ATOM 21 C2 A B 41 -6.315 52.702 11.075 1.00 24.22 C
ATOM 22 N3 A B 41 -5.393 52.725 10.111 1.00 24.54 N
ATOM 23 C4 A B 41 -5.960 52.703 8.893 1.00 24.92 C
ATOM 24 P G B 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 25 OP1 G B 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 26 OP2 G B 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 27 O5' G B 42 1.388 51.093 7.042 1.00 32.11 O
TER
Atoms:
OP1: (1.009,53.513,6.662)
OP2: (0.593,51.824,4.779)
C3': (3.037,49.150,8.774)
C1': (1.098,47.950,8.104)
C5': (1.627,51.280,8.439)
O6: (-2.104,45.869,3.475)
O4': (0.667,49.075,8.843)
C8: (-0.672,48.643,6.422)
C2: (0.346,44.464,5.627)
C6: (-1.281,45.826,4.398)
C5: (-0.911,46.853,5.306)
C4: (0.039,46.579,6.264)
P: (0.556,52.176,6.219)
C4': (1.793,49.944,9.151)
C2': (2.511,48.281,7.630)
O2': (3.260,47.102,7.420)
N1: (-0.589,44.641,4.636)
N2: (0.915,43.251,5.710)
N3: (0.704,45.418,6.478)
N7: (-1.353,48.164,5.418)
N9: (0.189,47.737,6.986)
O5': (1.388,51.093,7.042)
O3': (3.459,48.378,9.891)
OP2: (0.593,51.824,4.779)
C3': (3.037,49.150,8.774)
C1': (1.098,47.950,8.104)
C5': (1.627,51.280,8.439)
O6: (-2.104,45.869,3.475)
O4': (0.667,49.075,8.843)
C8: (-0.672,48.643,6.422)
C2: (0.346,44.464,5.627)
C6: (-1.281,45.826,4.398)
C5: (-0.911,46.853,5.306)
C4: (0.039,46.579,6.264)
P: (0.556,52.176,6.219)
C4': (1.793,49.944,9.151)
C2': (2.511,48.281,7.630)
O2': (3.260,47.102,7.420)
N1: (-0.589,44.641,4.636)
N2: (0.915,43.251,5.710)
N3: (0.704,45.418,6.478)
N7: (-1.353,48.164,5.418)
N9: (0.189,47.737,6.986)
O5': (1.388,51.093,7.042)
O3': (3.459,48.378,9.891)
OP1: (-1.733,53.770,2.254)
OP2: (-4.258,53.589,1.861)
C3': (-2.063,52.426,5.949)
C1': (-3.889,52.758,7.421)
C5': (-2.314,54.786,4.945)
O4': (-3.548,54.028,6.913)
C8: (-6.331,52.675,6.737)
O2': (-3.271,50.488,6.886)
C6: (-8.186,52.630,9.726)
C5: (-7.313,52.651,8.618)
C4: (-5.960,52.703,8.893)
P: (-3.105,54.283,2.479)
C4': (-2.290,53.920,6.194)
C2': (-3.398,51.790,6.350)
C2: (-6.315,52.702,11.075)
N1: (-7.648,52.659,10.962)
N3: (-5.393,52.725,10.111)
N6: (-9.515,52.588,9.612)
N7: (-7.538,52.636,7.251)
N9: (-5.329,52.712,7.670)
O5': (-3.354,54.376,4.060)
O3': (-0.949,51.959,6.733)
OP2: (-4.258,53.589,1.861)
C3': (-2.063,52.426,5.949)
C1': (-3.889,52.758,7.421)
C5': (-2.314,54.786,4.945)
O4': (-3.548,54.028,6.913)
C8: (-6.331,52.675,6.737)
O2': (-3.271,50.488,6.886)
C6: (-8.186,52.630,9.726)
C5: (-7.313,52.651,8.618)
C4: (-5.960,52.703,8.893)
P: (-3.105,54.283,2.479)
C4': (-2.290,53.920,6.194)
C2': (-3.398,51.790,6.350)
C2: (-6.315,52.702,11.075)
N1: (-7.648,52.659,10.962)
N3: (-5.393,52.725,10.111)
N6: (-9.515,52.588,9.612)
N7: (-7.538,52.636,7.251)
N9: (-5.329,52.712,7.670)
O5': (-3.354,54.376,4.060)
O3': (-0.949,51.959,6.733)
Image (generated by PyMOL):