Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1278:A1235
Extra
PDB:
ATOM 1 O3' G A1277 -29.643 -83.859 8.149 1.00 0.97 O
ATOM 2 P U A1278 -29.438 -84.191 9.701 1.00 29.20 P
ATOM 3 OP1 U A1278 -29.790 -85.621 9.917 1.00 47.94 O
ATOM 4 OP2 U A1278 -30.097 -83.152 10.511 1.00 47.94 O
ATOM 5 O5' U A1278 -27.873 -84.040 9.882 1.00 22.21 O
ATOM 6 C5' U A1278 -27.224 -82.801 9.614 1.00 22.21 C
ATOM 7 C4' U A1278 -25.745 -83.026 9.483 1.00 22.21 C
ATOM 8 O4' U A1278 -25.550 -84.142 8.595 1.00 22.21 O
ATOM 9 C3' U A1278 -24.977 -81.861 8.899 1.00 22.21 C
ATOM 10 O3' U A1278 -23.681 -81.859 9.470 1.00 22.21 O
ATOM 11 C2' U A1278 -24.913 -82.198 7.411 1.00 22.21 C
ATOM 12 O2' U A1278 -23.750 -81.693 6.771 1.00 22.21 O
ATOM 13 C1' U A1278 -24.884 -83.725 7.430 1.00 22.21 C
ATOM 14 N1 U A1278 -25.590 -84.337 6.302 1.00 20.86 N
ATOM 15 C2 U A1278 -24.846 -84.925 5.304 1.00 20.86 C
ATOM 16 O2 U A1278 -23.629 -84.914 5.282 1.00 20.86 O
ATOM 17 N3 U A1278 -25.581 -85.532 4.329 1.00 20.86 N
ATOM 18 C4 U A1278 -26.956 -85.607 4.257 1.00 20.86 C
ATOM 19 O4 U A1278 -27.485 -86.286 3.374 1.00 20.86 O
ATOM 20 C5 U A1278 -27.642 -84.944 5.312 1.00 20.86 C
ATOM 21 C6 U A1278 -26.952 -84.342 6.268 1.00 20.86 C
ATOM 22 P C A1279 -23.237 -80.654 10.432 1.00 14.50 P
ATOM 23 OP1 C A1279 -21.814 -80.312 10.127 1.00 52.97 O
ATOM 24 OP2 C A1279 -23.624 -81.036 11.810 1.00 52.97 O
ATOM 25 O5' C A1279 -24.157 -79.440 9.971 1.00 17.49 O
TER
ATOM 1 O3' G B1234 -29.042 -90.101 -0.073 1.00 25.27 O
ATOM 2 P A B1235 -28.568 -89.040 -1.155 1.00 42.96 P
ATOM 3 OP1 A B1235 -29.402 -89.292 -2.357 1.00 12.55 O
ATOM 4 OP2 A B1235 -27.090 -89.011 -1.268 1.00 12.55 O
ATOM 5 O5' A B1235 -29.041 -87.660 -0.554 1.00 71.58 O
ATOM 6 C5' A B1235 -29.253 -86.545 -1.407 1.00 71.58 C
ATOM 7 C4' A B1235 -29.528 -85.348 -0.573 1.00 71.58 C
ATOM 8 O4' A B1235 -28.493 -85.230 0.404 1.00 71.58 O
ATOM 9 C3' A B1235 -29.570 -84.030 -1.306 1.00 71.58 C
ATOM 10 O3' A B1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 11 C2' A B1235 -29.168 -83.026 -0.219 1.00 71.58 C
ATOM 12 O2' A B1235 -30.271 -82.490 0.486 1.00 71.58 O
ATOM 13 C1' A B1235 -28.374 -83.890 0.768 1.00 71.58 C
ATOM 14 N9 A B1235 -26.966 -83.618 0.996 1.00 13.09 N
ATOM 15 C8 A B1235 -25.889 -84.069 0.288 1.00 13.09 C
ATOM 16 N7 A B1235 -24.735 -83.743 0.823 1.00 13.09 N
ATOM 17 C5 A B1235 -25.085 -83.005 1.943 1.00 13.09 C
ATOM 18 C6 A B1235 -24.325 -82.384 2.935 1.00 13.09 C
ATOM 19 N6 A B1235 -22.991 -82.399 2.959 1.00 13.09 N
ATOM 20 N1 A B1235 -24.982 -81.731 3.915 1.00 13.09 N
ATOM 21 C2 A B1235 -26.307 -81.705 3.884 1.00 13.09 C
ATOM 22 N3 A B1235 -27.136 -82.246 3.000 1.00 13.09 N
ATOM 23 C4 A B1235 -26.452 -82.896 2.045 1.00 13.09 C
ATOM 24 P A B1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 25 OP1 A B1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 26 OP2 A B1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 27 O5' A B1236 -30.920 -82.204 -3.468 1.00 25.16 O
TER
ATOM 2 P U A1278 -29.438 -84.191 9.701 1.00 29.20 P
ATOM 3 OP1 U A1278 -29.790 -85.621 9.917 1.00 47.94 O
ATOM 4 OP2 U A1278 -30.097 -83.152 10.511 1.00 47.94 O
ATOM 5 O5' U A1278 -27.873 -84.040 9.882 1.00 22.21 O
ATOM 6 C5' U A1278 -27.224 -82.801 9.614 1.00 22.21 C
ATOM 7 C4' U A1278 -25.745 -83.026 9.483 1.00 22.21 C
ATOM 8 O4' U A1278 -25.550 -84.142 8.595 1.00 22.21 O
ATOM 9 C3' U A1278 -24.977 -81.861 8.899 1.00 22.21 C
ATOM 10 O3' U A1278 -23.681 -81.859 9.470 1.00 22.21 O
ATOM 11 C2' U A1278 -24.913 -82.198 7.411 1.00 22.21 C
ATOM 12 O2' U A1278 -23.750 -81.693 6.771 1.00 22.21 O
ATOM 13 C1' U A1278 -24.884 -83.725 7.430 1.00 22.21 C
ATOM 14 N1 U A1278 -25.590 -84.337 6.302 1.00 20.86 N
ATOM 15 C2 U A1278 -24.846 -84.925 5.304 1.00 20.86 C
ATOM 16 O2 U A1278 -23.629 -84.914 5.282 1.00 20.86 O
ATOM 17 N3 U A1278 -25.581 -85.532 4.329 1.00 20.86 N
ATOM 18 C4 U A1278 -26.956 -85.607 4.257 1.00 20.86 C
ATOM 19 O4 U A1278 -27.485 -86.286 3.374 1.00 20.86 O
ATOM 20 C5 U A1278 -27.642 -84.944 5.312 1.00 20.86 C
ATOM 21 C6 U A1278 -26.952 -84.342 6.268 1.00 20.86 C
ATOM 22 P C A1279 -23.237 -80.654 10.432 1.00 14.50 P
ATOM 23 OP1 C A1279 -21.814 -80.312 10.127 1.00 52.97 O
ATOM 24 OP2 C A1279 -23.624 -81.036 11.810 1.00 52.97 O
ATOM 25 O5' C A1279 -24.157 -79.440 9.971 1.00 17.49 O
TER
ATOM 1 O3' G B1234 -29.042 -90.101 -0.073 1.00 25.27 O
ATOM 2 P A B1235 -28.568 -89.040 -1.155 1.00 42.96 P
ATOM 3 OP1 A B1235 -29.402 -89.292 -2.357 1.00 12.55 O
ATOM 4 OP2 A B1235 -27.090 -89.011 -1.268 1.00 12.55 O
ATOM 5 O5' A B1235 -29.041 -87.660 -0.554 1.00 71.58 O
ATOM 6 C5' A B1235 -29.253 -86.545 -1.407 1.00 71.58 C
ATOM 7 C4' A B1235 -29.528 -85.348 -0.573 1.00 71.58 C
ATOM 8 O4' A B1235 -28.493 -85.230 0.404 1.00 71.58 O
ATOM 9 C3' A B1235 -29.570 -84.030 -1.306 1.00 71.58 C
ATOM 10 O3' A B1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 11 C2' A B1235 -29.168 -83.026 -0.219 1.00 71.58 C
ATOM 12 O2' A B1235 -30.271 -82.490 0.486 1.00 71.58 O
ATOM 13 C1' A B1235 -28.374 -83.890 0.768 1.00 71.58 C
ATOM 14 N9 A B1235 -26.966 -83.618 0.996 1.00 13.09 N
ATOM 15 C8 A B1235 -25.889 -84.069 0.288 1.00 13.09 C
ATOM 16 N7 A B1235 -24.735 -83.743 0.823 1.00 13.09 N
ATOM 17 C5 A B1235 -25.085 -83.005 1.943 1.00 13.09 C
ATOM 18 C6 A B1235 -24.325 -82.384 2.935 1.00 13.09 C
ATOM 19 N6 A B1235 -22.991 -82.399 2.959 1.00 13.09 N
ATOM 20 N1 A B1235 -24.982 -81.731 3.915 1.00 13.09 N
ATOM 21 C2 A B1235 -26.307 -81.705 3.884 1.00 13.09 C
ATOM 22 N3 A B1235 -27.136 -82.246 3.000 1.00 13.09 N
ATOM 23 C4 A B1235 -26.452 -82.896 2.045 1.00 13.09 C
ATOM 24 P A B1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 25 OP1 A B1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 26 OP2 A B1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 27 O5' A B1236 -30.920 -82.204 -3.468 1.00 25.16 O
TER
Atoms:
C4: (-26.956,-85.607,4.257)
N3: (-25.581,-85.532,4.329)
OP1: (-29.790,-85.621,9.917)
OP2: (-30.097,-83.152,10.511)
C2: (-24.846,-84.925,5.304)
C1': (-24.884,-83.725,7.430)
C3': (-24.977,-81.861,8.899)
O5': (-27.873,-84.040,9.882)
O4': (-25.550,-84.142,8.595)
C5': (-27.224,-82.801,9.614)
P: (-29.438,-84.191,9.701)
C4': (-25.745,-83.026,9.483)
C2': (-24.913,-82.198,7.411)
O2': (-23.750,-81.693,6.771)
N1: (-25.590,-84.337,6.302)
O4: (-27.485,-86.286,3.374)
O2: (-23.629,-84.914,5.282)
C6: (-26.952,-84.342,6.268)
C5: (-27.642,-84.944,5.312)
O3': (-23.681,-81.859,9.470)
N3: (-25.581,-85.532,4.329)
OP1: (-29.790,-85.621,9.917)
OP2: (-30.097,-83.152,10.511)
C2: (-24.846,-84.925,5.304)
C1': (-24.884,-83.725,7.430)
C3': (-24.977,-81.861,8.899)
O5': (-27.873,-84.040,9.882)
O4': (-25.550,-84.142,8.595)
C5': (-27.224,-82.801,9.614)
P: (-29.438,-84.191,9.701)
C4': (-25.745,-83.026,9.483)
C2': (-24.913,-82.198,7.411)
O2': (-23.750,-81.693,6.771)
N1: (-25.590,-84.337,6.302)
O4: (-27.485,-86.286,3.374)
O2: (-23.629,-84.914,5.282)
C6: (-26.952,-84.342,6.268)
C5: (-27.642,-84.944,5.312)
O3': (-23.681,-81.859,9.470)
OP1: (-29.402,-89.292,-2.357)
OP2: (-27.090,-89.011,-1.268)
C3': (-29.570,-84.030,-1.306)
C1': (-28.374,-83.890,0.768)
C5': (-29.253,-86.545,-1.407)
O4': (-28.493,-85.230,0.404)
C8: (-25.889,-84.069,0.288)
O2': (-30.271,-82.490,0.486)
C6: (-24.325,-82.384,2.935)
C5: (-25.085,-83.005,1.943)
C4: (-26.452,-82.896,2.045)
P: (-28.568,-89.040,-1.155)
C4': (-29.528,-85.348,-0.573)
C2': (-29.168,-83.026,-0.219)
C2: (-26.307,-81.705,3.884)
N1: (-24.982,-81.731,3.915)
N3: (-27.136,-82.246,3.000)
N6: (-22.991,-82.399,2.959)
N7: (-24.735,-83.743,0.823)
N9: (-26.966,-83.618,0.996)
O5': (-29.041,-87.660,-0.554)
O3': (-30.944,-83.885,-1.653)
OP2: (-27.090,-89.011,-1.268)
C3': (-29.570,-84.030,-1.306)
C1': (-28.374,-83.890,0.768)
C5': (-29.253,-86.545,-1.407)
O4': (-28.493,-85.230,0.404)
C8: (-25.889,-84.069,0.288)
O2': (-30.271,-82.490,0.486)
C6: (-24.325,-82.384,2.935)
C5: (-25.085,-83.005,1.943)
C4: (-26.452,-82.896,2.045)
P: (-28.568,-89.040,-1.155)
C4': (-29.528,-85.348,-0.573)
C2': (-29.168,-83.026,-0.219)
C2: (-26.307,-81.705,3.884)
N1: (-24.982,-81.731,3.915)
N3: (-27.136,-82.246,3.000)
N6: (-22.991,-82.399,2.959)
N7: (-24.735,-83.743,0.823)
N9: (-26.966,-83.618,0.996)
O5': (-29.041,-87.660,-0.554)
O3': (-30.944,-83.885,-1.653)
Image (generated by PyMOL):