Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1686:A1969
Extra
PDB:
ATOM 1 O3' U A1685 -13.354 106.107 117.559 1.00 2.41 O
ATOM 2 P U A1686 -12.837 106.428 116.078 1.00 1.02 P
ATOM 3 OP1 U A1686 -13.748 107.454 115.508 1.00 1.02 O
ATOM 4 OP2 U A1686 -12.688 105.136 115.382 1.00 1.02 O
ATOM 5 O5' U A1686 -11.414 107.055 116.332 1.00 1.02 O
ATOM 6 C5' U A1686 -10.897 108.047 115.470 1.00 1.02 C
ATOM 7 C4' U A1686 -10.158 109.084 116.248 1.00 1.02 C
ATOM 8 O4' U A1686 -11.125 109.978 116.871 1.00 1.02 O
ATOM 9 C3' U A1686 -9.305 108.517 117.384 1.00 1.02 C
ATOM 10 O3' U A1686 -8.134 109.297 117.547 1.00 1.02 O
ATOM 11 C2' U A1686 -10.198 108.701 118.598 1.00 1.02 C
ATOM 12 O2' U A1686 -9.507 108.793 119.822 1.00 1.02 O
ATOM 13 C1' U A1686 -10.900 110.003 118.262 1.00 1.02 C
ATOM 14 N1 U A1686 -12.162 110.144 118.928 1.00 1.19 N
ATOM 15 C2 U A1686 -12.291 111.240 119.738 1.00 1.19 C
ATOM 16 O2 U A1686 -11.420 112.077 119.867 1.00 1.19 O
ATOM 17 N3 U A1686 -13.490 111.332 120.384 1.00 1.19 N
ATOM 18 C4 U A1686 -14.522 110.424 120.310 1.00 1.19 C
ATOM 19 O4 U A1686 -15.531 110.658 120.979 1.00 1.19 O
ATOM 20 C5 U A1686 -14.284 109.282 119.456 1.00 1.19 C
ATOM 21 C6 U A1686 -13.116 109.181 118.813 1.00 1.19 C
ATOM 22 P C A1687 -6.957 109.195 116.482 1.00 7.72 P
ATOM 23 OP1 C A1687 -5.988 110.279 116.816 1.00 7.72 O
ATOM 24 OP2 C A1687 -7.588 109.177 115.132 1.00 7.72 O
ATOM 25 O5' C A1687 -6.307 107.777 116.802 1.00 7.72 O
TER
ATOM 1 O3' U B1968 -18.643 106.887 121.826 1.00 13.86 O
ATOM 2 P A B1969 -18.734 106.014 123.171 1.00 1.50 P
ATOM 3 OP1 A B1969 -19.419 104.742 122.830 1.00 1.50 O
ATOM 4 OP2 A B1969 -19.334 106.891 124.214 1.00 1.50 O
ATOM 5 O5' A B1969 -17.206 105.722 123.519 1.00 1.50 O
ATOM 6 C5' A B1969 -16.482 104.670 122.888 1.00 1.50 C
ATOM 7 C4' A B1969 -15.013 105.009 122.773 1.00 1.50 C
ATOM 8 O4' A B1969 -14.862 106.215 121.981 1.00 1.50 O
ATOM 9 C3' A B1969 -14.290 105.307 124.086 1.00 1.50 C
ATOM 10 O3' A B1969 -13.765 104.136 124.695 1.00 1.50 O
ATOM 11 C2' A B1969 -13.215 106.305 123.671 1.00 1.50 C
ATOM 12 O2' A B1969 -12.082 105.653 123.141 1.00 1.50 O
ATOM 13 C1' A B1969 -13.893 107.061 122.546 1.00 1.50 C
ATOM 14 N9 A B1969 -14.558 108.264 123.051 1.00 1.84 N
ATOM 15 C8 A B1969 -15.890 108.534 123.254 1.00 1.84 C
ATOM 16 N7 A B1969 -16.097 109.724 123.760 1.00 1.84 N
ATOM 17 C5 A B1969 -14.808 110.262 123.911 1.00 1.84 C
ATOM 18 C6 A B1969 -14.321 111.495 124.399 1.00 1.84 C
ATOM 19 N6 A B1969 -15.087 112.507 124.869 1.00 1.84 N
ATOM 20 N1 A B1969 -12.988 111.642 124.400 1.00 1.84 N
ATOM 21 C2 A B1969 -12.215 110.661 123.945 1.00 1.84 C
ATOM 22 N3 A B1969 -12.535 109.483 123.450 1.00 1.84 N
ATOM 23 C4 A B1969 -13.862 109.355 123.477 1.00 1.84 C
ATOM 24 P A B1970 -13.884 103.888 126.286 1.00 7.14 P
ATOM 25 OP1 A B1970 -13.279 102.563 126.562 1.00 7.14 O
ATOM 26 OP2 A B1970 -15.302 104.108 126.663 1.00 7.14 O
ATOM 27 O5' A B1970 -12.984 105.041 126.914 1.00 7.14 O
TER
ATOM 2 P U A1686 -12.837 106.428 116.078 1.00 1.02 P
ATOM 3 OP1 U A1686 -13.748 107.454 115.508 1.00 1.02 O
ATOM 4 OP2 U A1686 -12.688 105.136 115.382 1.00 1.02 O
ATOM 5 O5' U A1686 -11.414 107.055 116.332 1.00 1.02 O
ATOM 6 C5' U A1686 -10.897 108.047 115.470 1.00 1.02 C
ATOM 7 C4' U A1686 -10.158 109.084 116.248 1.00 1.02 C
ATOM 8 O4' U A1686 -11.125 109.978 116.871 1.00 1.02 O
ATOM 9 C3' U A1686 -9.305 108.517 117.384 1.00 1.02 C
ATOM 10 O3' U A1686 -8.134 109.297 117.547 1.00 1.02 O
ATOM 11 C2' U A1686 -10.198 108.701 118.598 1.00 1.02 C
ATOM 12 O2' U A1686 -9.507 108.793 119.822 1.00 1.02 O
ATOM 13 C1' U A1686 -10.900 110.003 118.262 1.00 1.02 C
ATOM 14 N1 U A1686 -12.162 110.144 118.928 1.00 1.19 N
ATOM 15 C2 U A1686 -12.291 111.240 119.738 1.00 1.19 C
ATOM 16 O2 U A1686 -11.420 112.077 119.867 1.00 1.19 O
ATOM 17 N3 U A1686 -13.490 111.332 120.384 1.00 1.19 N
ATOM 18 C4 U A1686 -14.522 110.424 120.310 1.00 1.19 C
ATOM 19 O4 U A1686 -15.531 110.658 120.979 1.00 1.19 O
ATOM 20 C5 U A1686 -14.284 109.282 119.456 1.00 1.19 C
ATOM 21 C6 U A1686 -13.116 109.181 118.813 1.00 1.19 C
ATOM 22 P C A1687 -6.957 109.195 116.482 1.00 7.72 P
ATOM 23 OP1 C A1687 -5.988 110.279 116.816 1.00 7.72 O
ATOM 24 OP2 C A1687 -7.588 109.177 115.132 1.00 7.72 O
ATOM 25 O5' C A1687 -6.307 107.777 116.802 1.00 7.72 O
TER
ATOM 1 O3' U B1968 -18.643 106.887 121.826 1.00 13.86 O
ATOM 2 P A B1969 -18.734 106.014 123.171 1.00 1.50 P
ATOM 3 OP1 A B1969 -19.419 104.742 122.830 1.00 1.50 O
ATOM 4 OP2 A B1969 -19.334 106.891 124.214 1.00 1.50 O
ATOM 5 O5' A B1969 -17.206 105.722 123.519 1.00 1.50 O
ATOM 6 C5' A B1969 -16.482 104.670 122.888 1.00 1.50 C
ATOM 7 C4' A B1969 -15.013 105.009 122.773 1.00 1.50 C
ATOM 8 O4' A B1969 -14.862 106.215 121.981 1.00 1.50 O
ATOM 9 C3' A B1969 -14.290 105.307 124.086 1.00 1.50 C
ATOM 10 O3' A B1969 -13.765 104.136 124.695 1.00 1.50 O
ATOM 11 C2' A B1969 -13.215 106.305 123.671 1.00 1.50 C
ATOM 12 O2' A B1969 -12.082 105.653 123.141 1.00 1.50 O
ATOM 13 C1' A B1969 -13.893 107.061 122.546 1.00 1.50 C
ATOM 14 N9 A B1969 -14.558 108.264 123.051 1.00 1.84 N
ATOM 15 C8 A B1969 -15.890 108.534 123.254 1.00 1.84 C
ATOM 16 N7 A B1969 -16.097 109.724 123.760 1.00 1.84 N
ATOM 17 C5 A B1969 -14.808 110.262 123.911 1.00 1.84 C
ATOM 18 C6 A B1969 -14.321 111.495 124.399 1.00 1.84 C
ATOM 19 N6 A B1969 -15.087 112.507 124.869 1.00 1.84 N
ATOM 20 N1 A B1969 -12.988 111.642 124.400 1.00 1.84 N
ATOM 21 C2 A B1969 -12.215 110.661 123.945 1.00 1.84 C
ATOM 22 N3 A B1969 -12.535 109.483 123.450 1.00 1.84 N
ATOM 23 C4 A B1969 -13.862 109.355 123.477 1.00 1.84 C
ATOM 24 P A B1970 -13.884 103.888 126.286 1.00 7.14 P
ATOM 25 OP1 A B1970 -13.279 102.563 126.562 1.00 7.14 O
ATOM 26 OP2 A B1970 -15.302 104.108 126.663 1.00 7.14 O
ATOM 27 O5' A B1970 -12.984 105.041 126.914 1.00 7.14 O
TER
Atoms:
C4: (-14.522,110.424,120.310)
N3: (-13.490,111.332,120.384)
OP1: (-13.748,107.454,115.508)
OP2: (-12.688,105.136,115.382)
C2: (-12.291,111.240,119.738)
C1': (-10.900,110.003,118.262)
C3': (-9.305,108.517,117.384)
O5': (-11.414,107.055,116.332)
O4': (-11.125,109.978,116.871)
C5': (-10.897,108.047,115.470)
P: (-12.837,106.428,116.078)
C4': (-10.158,109.084,116.248)
C2': (-10.198,108.701,118.598)
O2': (-9.507,108.793,119.822)
N1: (-12.162,110.144,118.928)
O4: (-15.531,110.658,120.979)
O2: (-11.420,112.077,119.867)
C6: (-13.116,109.181,118.813)
C5: (-14.284,109.282,119.456)
O3': (-8.134,109.297,117.547)
N3: (-13.490,111.332,120.384)
OP1: (-13.748,107.454,115.508)
OP2: (-12.688,105.136,115.382)
C2: (-12.291,111.240,119.738)
C1': (-10.900,110.003,118.262)
C3': (-9.305,108.517,117.384)
O5': (-11.414,107.055,116.332)
O4': (-11.125,109.978,116.871)
C5': (-10.897,108.047,115.470)
P: (-12.837,106.428,116.078)
C4': (-10.158,109.084,116.248)
C2': (-10.198,108.701,118.598)
O2': (-9.507,108.793,119.822)
N1: (-12.162,110.144,118.928)
O4: (-15.531,110.658,120.979)
O2: (-11.420,112.077,119.867)
C6: (-13.116,109.181,118.813)
C5: (-14.284,109.282,119.456)
O3': (-8.134,109.297,117.547)
OP1: (-19.419,104.742,122.830)
OP2: (-19.334,106.891,124.214)
C3': (-14.290,105.307,124.086)
C1': (-13.893,107.061,122.546)
C5': (-16.482,104.670,122.888)
O4': (-14.862,106.215,121.981)
C8: (-15.890,108.534,123.254)
O2': (-12.082,105.653,123.141)
C6: (-14.321,111.495,124.399)
C5: (-14.808,110.262,123.911)
C4: (-13.862,109.355,123.477)
P: (-18.734,106.014,123.171)
C4': (-15.013,105.009,122.773)
C2': (-13.215,106.305,123.671)
C2: (-12.215,110.661,123.945)
N1: (-12.988,111.642,124.400)
N3: (-12.535,109.483,123.450)
N6: (-15.087,112.507,124.869)
N7: (-16.097,109.724,123.760)
N9: (-14.558,108.264,123.051)
O5': (-17.206,105.722,123.519)
O3': (-13.765,104.136,124.695)
OP2: (-19.334,106.891,124.214)
C3': (-14.290,105.307,124.086)
C1': (-13.893,107.061,122.546)
C5': (-16.482,104.670,122.888)
O4': (-14.862,106.215,121.981)
C8: (-15.890,108.534,123.254)
O2': (-12.082,105.653,123.141)
C6: (-14.321,111.495,124.399)
C5: (-14.808,110.262,123.911)
C4: (-13.862,109.355,123.477)
P: (-18.734,106.014,123.171)
C4': (-15.013,105.009,122.773)
C2': (-13.215,106.305,123.671)
C2: (-12.215,110.661,123.945)
N1: (-12.988,111.642,124.400)
N3: (-12.535,109.483,123.450)
N6: (-15.087,112.507,124.869)
N7: (-16.097,109.724,123.760)
N9: (-14.558,108.264,123.051)
O5': (-17.206,105.722,123.519)
O3': (-13.765,104.136,124.695)
Image (generated by PyMOL):