Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 2 P G A 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 3 OP1 G A 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 4 OP2 G A 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 5 O5' G A 42 0.661 50.836 6.902 1.00 29.89 O
ATOM 6 C5' G A 42 0.889 51.049 8.299 1.00 29.07 C
ATOM 7 C4' G A 42 1.125 49.739 9.046 1.00 28.55 C
ATOM 8 O4' G A 42 -0.016 48.858 8.875 1.00 28.60 O
ATOM 9 C3' G A 42 2.344 48.924 8.616 1.00 28.20 C
ATOM 10 O3' G A 42 2.913 48.234 9.741 1.00 28.39 O
ATOM 11 C2' G A 42 1.745 47.969 7.585 1.00 27.68 C
ATOM 12 O2' G A 42 2.440 46.747 7.471 1.00 27.76 O
ATOM 13 C1' G A 42 0.346 47.708 8.130 1.00 27.86 C
ATOM 14 N9 G A 42 -0.588 47.514 7.027 1.00 27.91 N
ATOM 15 C8 G A 42 -1.432 48.443 6.468 1.00 27.65 C
ATOM 16 N7 G A 42 -2.138 47.981 5.476 1.00 27.74 N
ATOM 17 C5 G A 42 -1.730 46.660 5.362 1.00 27.82 C
ATOM 18 C6 G A 42 -2.140 45.654 4.454 1.00 27.78 C
ATOM 19 O6 G A 42 -2.980 45.745 3.546 1.00 27.15 O
ATOM 20 N1 G A 42 -1.470 44.445 4.682 1.00 28.06 N
ATOM 21 C2 G A 42 -0.524 44.236 5.665 1.00 27.83 C
ATOM 22 N2 G A 42 0.014 43.012 5.743 1.00 27.53 N
ATOM 23 N3 G A 42 -0.132 45.175 6.515 1.00 28.00 N
ATOM 24 C4 G A 42 -0.775 46.356 6.310 1.00 27.89 C
ATOM 25 P G A 43 4.500 48.099 9.938 1.00 28.51 P
ATOM 26 OP1 G A 43 4.765 46.840 10.663 1.00 28.38 O
ATOM 27 OP2 G A 43 5.001 49.375 10.494 1.00 29.00 O
ATOM 28 O5' G A 43 5.041 47.917 8.444 1.00 28.55 O
TER
ATOM 1 O3' C B 40 -3.693 55.528 1.611 1.00 43.33 O
ATOM 2 P A B 41 -3.564 54.116 2.350 1.00 41.41 P
ATOM 3 OP1 A B 41 -2.158 53.677 2.179 1.00 41.44 O
ATOM 4 OP2 A B 41 -4.673 53.237 1.899 1.00 40.59 O
ATOM 5 O5' A B 41 -3.818 54.506 3.884 1.00 38.61 O
ATOM 6 C5' A B 41 -2.732 54.874 4.731 1.00 35.18 C
ATOM 7 C4' A B 41 -2.773 54.088 6.029 1.00 32.74 C
ATOM 8 O4' A B 41 -4.069 54.247 6.666 1.00 31.93 O
ATOM 9 C3' A B 41 -2.561 52.582 5.876 1.00 31.74 C
ATOM 10 O3' A B 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 11 C2' A B 41 -3.872 51.974 6.372 1.00 31.28 C
ATOM 12 O2' A B 41 -3.693 50.746 7.047 1.00 31.78 O
ATOM 13 C1' A B 41 -4.350 53.045 7.346 1.00 30.77 C
ATOM 14 N9 A B 41 -5.771 52.936 7.687 1.00 29.93 N
ATOM 15 C8 A B 41 -6.825 52.909 6.816 1.00 29.44 C
ATOM 16 N7 A B 41 -7.993 52.790 7.403 1.00 29.42 N
ATOM 17 C5 A B 41 -7.691 52.738 8.753 1.00 29.23 C
ATOM 18 C6 A B 41 -8.498 52.612 9.910 1.00 29.19 C
ATOM 19 N6 A B 41 -9.832 52.515 9.863 1.00 29.47 N
ATOM 20 N1 A B 41 -7.882 52.588 11.117 1.00 28.67 N
ATOM 21 C2 A B 41 -6.546 52.684 11.159 1.00 28.40 C
ATOM 22 N3 A B 41 -5.688 52.804 10.140 1.00 28.73 N
ATOM 23 C4 A B 41 -6.323 52.826 8.951 1.00 29.26 C
ATOM 24 P G B 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 25 OP1 G B 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 26 OP2 G B 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 27 O5' G B 42 0.661 50.836 6.902 1.00 29.89 O
TER
ATOM 2 P G A 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 3 OP1 G A 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 4 OP2 G A 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 5 O5' G A 42 0.661 50.836 6.902 1.00 29.89 O
ATOM 6 C5' G A 42 0.889 51.049 8.299 1.00 29.07 C
ATOM 7 C4' G A 42 1.125 49.739 9.046 1.00 28.55 C
ATOM 8 O4' G A 42 -0.016 48.858 8.875 1.00 28.60 O
ATOM 9 C3' G A 42 2.344 48.924 8.616 1.00 28.20 C
ATOM 10 O3' G A 42 2.913 48.234 9.741 1.00 28.39 O
ATOM 11 C2' G A 42 1.745 47.969 7.585 1.00 27.68 C
ATOM 12 O2' G A 42 2.440 46.747 7.471 1.00 27.76 O
ATOM 13 C1' G A 42 0.346 47.708 8.130 1.00 27.86 C
ATOM 14 N9 G A 42 -0.588 47.514 7.027 1.00 27.91 N
ATOM 15 C8 G A 42 -1.432 48.443 6.468 1.00 27.65 C
ATOM 16 N7 G A 42 -2.138 47.981 5.476 1.00 27.74 N
ATOM 17 C5 G A 42 -1.730 46.660 5.362 1.00 27.82 C
ATOM 18 C6 G A 42 -2.140 45.654 4.454 1.00 27.78 C
ATOM 19 O6 G A 42 -2.980 45.745 3.546 1.00 27.15 O
ATOM 20 N1 G A 42 -1.470 44.445 4.682 1.00 28.06 N
ATOM 21 C2 G A 42 -0.524 44.236 5.665 1.00 27.83 C
ATOM 22 N2 G A 42 0.014 43.012 5.743 1.00 27.53 N
ATOM 23 N3 G A 42 -0.132 45.175 6.515 1.00 28.00 N
ATOM 24 C4 G A 42 -0.775 46.356 6.310 1.00 27.89 C
ATOM 25 P G A 43 4.500 48.099 9.938 1.00 28.51 P
ATOM 26 OP1 G A 43 4.765 46.840 10.663 1.00 28.38 O
ATOM 27 OP2 G A 43 5.001 49.375 10.494 1.00 29.00 O
ATOM 28 O5' G A 43 5.041 47.917 8.444 1.00 28.55 O
TER
ATOM 1 O3' C B 40 -3.693 55.528 1.611 1.00 43.33 O
ATOM 2 P A B 41 -3.564 54.116 2.350 1.00 41.41 P
ATOM 3 OP1 A B 41 -2.158 53.677 2.179 1.00 41.44 O
ATOM 4 OP2 A B 41 -4.673 53.237 1.899 1.00 40.59 O
ATOM 5 O5' A B 41 -3.818 54.506 3.884 1.00 38.61 O
ATOM 6 C5' A B 41 -2.732 54.874 4.731 1.00 35.18 C
ATOM 7 C4' A B 41 -2.773 54.088 6.029 1.00 32.74 C
ATOM 8 O4' A B 41 -4.069 54.247 6.666 1.00 31.93 O
ATOM 9 C3' A B 41 -2.561 52.582 5.876 1.00 31.74 C
ATOM 10 O3' A B 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 11 C2' A B 41 -3.872 51.974 6.372 1.00 31.28 C
ATOM 12 O2' A B 41 -3.693 50.746 7.047 1.00 31.78 O
ATOM 13 C1' A B 41 -4.350 53.045 7.346 1.00 30.77 C
ATOM 14 N9 A B 41 -5.771 52.936 7.687 1.00 29.93 N
ATOM 15 C8 A B 41 -6.825 52.909 6.816 1.00 29.44 C
ATOM 16 N7 A B 41 -7.993 52.790 7.403 1.00 29.42 N
ATOM 17 C5 A B 41 -7.691 52.738 8.753 1.00 29.23 C
ATOM 18 C6 A B 41 -8.498 52.612 9.910 1.00 29.19 C
ATOM 19 N6 A B 41 -9.832 52.515 9.863 1.00 29.47 N
ATOM 20 N1 A B 41 -7.882 52.588 11.117 1.00 28.67 N
ATOM 21 C2 A B 41 -6.546 52.684 11.159 1.00 28.40 C
ATOM 22 N3 A B 41 -5.688 52.804 10.140 1.00 28.73 N
ATOM 23 C4 A B 41 -6.323 52.826 8.951 1.00 29.26 C
ATOM 24 P G B 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 25 OP1 G B 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 26 OP2 G B 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 27 O5' G B 42 0.661 50.836 6.902 1.00 29.89 O
TER
Atoms:
OP1: (0.770,53.219,6.178)
OP2: (-0.222,51.426,4.636)
C3': (2.344,48.924,8.616)
C1': (0.346,47.708,8.130)
C5': (0.889,51.049,8.299)
O6: (-2.980,45.745,3.546)
O4': (-0.016,48.858,8.875)
C8: (-1.432,48.443,6.468)
C2: (-0.524,44.236,5.665)
C6: (-2.140,45.654,4.454)
C5: (-1.730,46.660,5.362)
C4: (-0.775,46.356,6.310)
P: (-0.006,51.972,5.994)
C4': (1.125,49.739,9.046)
C2': (1.745,47.969,7.585)
O2': (2.440,46.747,7.471)
N1: (-1.470,44.445,4.682)
N2: (0.014,43.012,5.743)
N3: (-0.132,45.175,6.515)
N7: (-2.138,47.981,5.476)
N9: (-0.588,47.514,7.027)
O5': (0.661,50.836,6.902)
O3': (2.913,48.234,9.741)
OP2: (-0.222,51.426,4.636)
C3': (2.344,48.924,8.616)
C1': (0.346,47.708,8.130)
C5': (0.889,51.049,8.299)
O6: (-2.980,45.745,3.546)
O4': (-0.016,48.858,8.875)
C8: (-1.432,48.443,6.468)
C2: (-0.524,44.236,5.665)
C6: (-2.140,45.654,4.454)
C5: (-1.730,46.660,5.362)
C4: (-0.775,46.356,6.310)
P: (-0.006,51.972,5.994)
C4': (1.125,49.739,9.046)
C2': (1.745,47.969,7.585)
O2': (2.440,46.747,7.471)
N1: (-1.470,44.445,4.682)
N2: (0.014,43.012,5.743)
N3: (-0.132,45.175,6.515)
N7: (-2.138,47.981,5.476)
N9: (-0.588,47.514,7.027)
O5': (0.661,50.836,6.902)
O3': (2.913,48.234,9.741)
OP1: (-2.158,53.677,2.179)
OP2: (-4.673,53.237,1.899)
C3': (-2.561,52.582,5.876)
C1': (-4.350,53.045,7.346)
C5': (-2.732,54.874,4.731)
O4': (-4.069,54.247,6.666)
C8: (-6.825,52.909,6.816)
O2': (-3.693,50.746,7.047)
C6: (-8.498,52.612,9.910)
C5: (-7.691,52.738,8.753)
C4: (-6.323,52.826,8.951)
P: (-3.564,54.116,2.350)
C4': (-2.773,54.088,6.029)
C2': (-3.872,51.974,6.372)
C2: (-6.546,52.684,11.159)
N1: (-7.882,52.588,11.117)
N3: (-5.688,52.804,10.140)
N6: (-9.832,52.515,9.863)
N7: (-7.993,52.790,7.403)
N9: (-5.771,52.936,7.687)
O5': (-3.818,54.506,3.884)
O3': (-1.447,52.164,6.661)
OP2: (-4.673,53.237,1.899)
C3': (-2.561,52.582,5.876)
C1': (-4.350,53.045,7.346)
C5': (-2.732,54.874,4.731)
O4': (-4.069,54.247,6.666)
C8: (-6.825,52.909,6.816)
O2': (-3.693,50.746,7.047)
C6: (-8.498,52.612,9.910)
C5: (-7.691,52.738,8.753)
C4: (-6.323,52.826,8.951)
P: (-3.564,54.116,2.350)
C4': (-2.773,54.088,6.029)
C2': (-3.872,51.974,6.372)
C2: (-6.546,52.684,11.159)
N1: (-7.882,52.588,11.117)
N3: (-5.688,52.804,10.140)
N6: (-9.832,52.515,9.863)
N7: (-7.993,52.790,7.403)
N9: (-5.771,52.936,7.687)
O5': (-3.818,54.506,3.884)
O3': (-1.447,52.164,6.661)
Image (generated by PyMOL):