Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
301D:B12:B13
Extra
PDB:
ATOM 1 O3' G A 11 38.184 -0.155 8.807 1.00 59.66 O
ATOM 2 P U A 12 37.816 0.008 7.252 1.00 56.27 P
ATOM 3 OP1 U A 12 38.905 -0.614 6.455 1.00 55.90 O
ATOM 4 OP2 U A 12 37.477 1.437 7.025 1.00 52.45 O
ATOM 5 O5' U A 12 36.513 -0.895 7.131 1.00 45.12 O
ATOM 6 C5' U A 12 35.560 -0.634 6.151 1.00 39.28 C
ATOM 7 C4' U A 12 35.513 -1.779 5.203 1.00 43.33 C
ATOM 8 O4' U A 12 36.832 -1.989 4.661 1.00 43.94 O
ATOM 9 C3' U A 12 35.248 -3.093 5.884 1.00 47.42 C
ATOM 10 O3' U A 12 33.877 -3.202 6.156 1.00 51.46 O
ATOM 11 C2' U A 12 35.802 -4.128 4.911 1.00 45.59 C
ATOM 12 O2' U A 12 34.901 -4.642 3.945 1.00 39.12 O
ATOM 13 C1' U A 12 36.942 -3.342 4.263 1.00 47.03 C
ATOM 14 N1 U A 12 38.287 -3.831 4.586 1.00 49.13 N
ATOM 15 C2 U A 12 38.535 -5.151 4.313 1.00 52.25 C
ATOM 16 O2 U A 12 37.682 -5.890 3.824 1.00 52.54 O
ATOM 17 N3 U A 12 39.804 -5.577 4.622 1.00 55.83 N
ATOM 18 C4 U A 12 40.825 -4.822 5.174 1.00 57.70 C
ATOM 19 O4 U A 12 41.861 -5.384 5.551 1.00 59.84 O
ATOM 20 C5 U A 12 40.486 -3.449 5.407 1.00 55.89 C
ATOM 21 C6 U A 12 39.254 -3.013 5.118 1.00 49.62 C
ATOM 22 P A A 13 33.424 -3.386 7.671 1.00 56.04 P
ATOM 23 OP1 A A 13 31.952 -3.137 7.772 1.00 52.84 O
ATOM 24 OP2 A A 13 34.389 -2.560 8.470 1.00 48.93 O
ATOM 25 O5' A A 13 33.687 -4.937 7.929 1.00 46.52 O
TER
ATOM 1 O3' U B 12 33.877 -3.202 6.156 1.00 51.46 O
ATOM 2 P A B 13 33.424 -3.386 7.671 1.00 56.04 P
ATOM 3 OP1 A B 13 31.952 -3.137 7.772 1.00 52.84 O
ATOM 4 OP2 A B 13 34.389 -2.560 8.470 1.00 48.93 O
ATOM 5 O5' A B 13 33.687 -4.937 7.929 1.00 46.52 O
ATOM 6 C5' A B 13 32.830 -5.921 7.342 1.00 42.64 C
ATOM 7 C4' A B 13 33.560 -7.232 7.239 1.00 38.27 C
ATOM 8 O4' A B 13 34.867 -6.927 6.729 1.00 34.40 O
ATOM 9 C3' A B 13 33.813 -7.930 8.563 1.00 42.21 C
ATOM 10 O3' A B 13 32.740 -8.852 8.764 1.00 46.83 O
ATOM 11 C2' A B 13 35.142 -8.645 8.342 1.00 36.99 C
ATOM 12 O2' A B 13 35.012 -9.868 7.660 1.00 42.53 O
ATOM 13 C1' A B 13 35.828 -7.726 7.353 1.00 27.01 C
ATOM 14 N9 A B 13 36.802 -6.816 7.865 1.00 15.82 N
ATOM 15 C8 A B 13 36.583 -5.556 8.324 1.00 19.12 C
ATOM 16 N7 A B 13 37.687 -4.893 8.567 1.00 27.11 N
ATOM 17 C5 A B 13 38.690 -5.804 8.281 1.00 21.94 C
ATOM 18 C6 A B 13 40.093 -5.711 8.310 1.00 24.09 C
ATOM 19 N6 A B 13 40.759 -4.635 8.726 1.00 28.43 N
ATOM 20 N1 A B 13 40.796 -6.783 7.909 1.00 27.97 N
ATOM 21 C2 A B 13 40.116 -7.891 7.552 1.00 32.67 C
ATOM 22 N3 A B 13 38.800 -8.106 7.519 1.00 21.40 N
ATOM 23 C4 A B 13 38.146 -7.005 7.882 1.00 18.95 C
ATOM 24 P A B 14 32.253 -9.193 10.252 1.00 46.54 P
ATOM 25 OP1 A B 14 30.993 -10.012 10.158 1.00 36.65 O
ATOM 26 OP2 A B 14 32.248 -7.906 10.982 1.00 32.81 O
ATOM 27 O5' A B 14 33.418 -10.128 10.783 1.00 38.47 O
TER
ATOM 2 P U A 12 37.816 0.008 7.252 1.00 56.27 P
ATOM 3 OP1 U A 12 38.905 -0.614 6.455 1.00 55.90 O
ATOM 4 OP2 U A 12 37.477 1.437 7.025 1.00 52.45 O
ATOM 5 O5' U A 12 36.513 -0.895 7.131 1.00 45.12 O
ATOM 6 C5' U A 12 35.560 -0.634 6.151 1.00 39.28 C
ATOM 7 C4' U A 12 35.513 -1.779 5.203 1.00 43.33 C
ATOM 8 O4' U A 12 36.832 -1.989 4.661 1.00 43.94 O
ATOM 9 C3' U A 12 35.248 -3.093 5.884 1.00 47.42 C
ATOM 10 O3' U A 12 33.877 -3.202 6.156 1.00 51.46 O
ATOM 11 C2' U A 12 35.802 -4.128 4.911 1.00 45.59 C
ATOM 12 O2' U A 12 34.901 -4.642 3.945 1.00 39.12 O
ATOM 13 C1' U A 12 36.942 -3.342 4.263 1.00 47.03 C
ATOM 14 N1 U A 12 38.287 -3.831 4.586 1.00 49.13 N
ATOM 15 C2 U A 12 38.535 -5.151 4.313 1.00 52.25 C
ATOM 16 O2 U A 12 37.682 -5.890 3.824 1.00 52.54 O
ATOM 17 N3 U A 12 39.804 -5.577 4.622 1.00 55.83 N
ATOM 18 C4 U A 12 40.825 -4.822 5.174 1.00 57.70 C
ATOM 19 O4 U A 12 41.861 -5.384 5.551 1.00 59.84 O
ATOM 20 C5 U A 12 40.486 -3.449 5.407 1.00 55.89 C
ATOM 21 C6 U A 12 39.254 -3.013 5.118 1.00 49.62 C
ATOM 22 P A A 13 33.424 -3.386 7.671 1.00 56.04 P
ATOM 23 OP1 A A 13 31.952 -3.137 7.772 1.00 52.84 O
ATOM 24 OP2 A A 13 34.389 -2.560 8.470 1.00 48.93 O
ATOM 25 O5' A A 13 33.687 -4.937 7.929 1.00 46.52 O
TER
ATOM 1 O3' U B 12 33.877 -3.202 6.156 1.00 51.46 O
ATOM 2 P A B 13 33.424 -3.386 7.671 1.00 56.04 P
ATOM 3 OP1 A B 13 31.952 -3.137 7.772 1.00 52.84 O
ATOM 4 OP2 A B 13 34.389 -2.560 8.470 1.00 48.93 O
ATOM 5 O5' A B 13 33.687 -4.937 7.929 1.00 46.52 O
ATOM 6 C5' A B 13 32.830 -5.921 7.342 1.00 42.64 C
ATOM 7 C4' A B 13 33.560 -7.232 7.239 1.00 38.27 C
ATOM 8 O4' A B 13 34.867 -6.927 6.729 1.00 34.40 O
ATOM 9 C3' A B 13 33.813 -7.930 8.563 1.00 42.21 C
ATOM 10 O3' A B 13 32.740 -8.852 8.764 1.00 46.83 O
ATOM 11 C2' A B 13 35.142 -8.645 8.342 1.00 36.99 C
ATOM 12 O2' A B 13 35.012 -9.868 7.660 1.00 42.53 O
ATOM 13 C1' A B 13 35.828 -7.726 7.353 1.00 27.01 C
ATOM 14 N9 A B 13 36.802 -6.816 7.865 1.00 15.82 N
ATOM 15 C8 A B 13 36.583 -5.556 8.324 1.00 19.12 C
ATOM 16 N7 A B 13 37.687 -4.893 8.567 1.00 27.11 N
ATOM 17 C5 A B 13 38.690 -5.804 8.281 1.00 21.94 C
ATOM 18 C6 A B 13 40.093 -5.711 8.310 1.00 24.09 C
ATOM 19 N6 A B 13 40.759 -4.635 8.726 1.00 28.43 N
ATOM 20 N1 A B 13 40.796 -6.783 7.909 1.00 27.97 N
ATOM 21 C2 A B 13 40.116 -7.891 7.552 1.00 32.67 C
ATOM 22 N3 A B 13 38.800 -8.106 7.519 1.00 21.40 N
ATOM 23 C4 A B 13 38.146 -7.005 7.882 1.00 18.95 C
ATOM 24 P A B 14 32.253 -9.193 10.252 1.00 46.54 P
ATOM 25 OP1 A B 14 30.993 -10.012 10.158 1.00 36.65 O
ATOM 26 OP2 A B 14 32.248 -7.906 10.982 1.00 32.81 O
ATOM 27 O5' A B 14 33.418 -10.128 10.783 1.00 38.47 O
TER
Atoms:
C4: (40.825,-4.822,5.174)
N3: (39.804,-5.577,4.622)
OP1: (38.905,-0.614,6.455)
OP2: (37.477,1.437,7.025)
C2: (38.535,-5.151,4.313)
C1': (36.942,-3.342,4.263)
C3': (35.248,-3.093,5.884)
O5': (36.513,-0.895,7.131)
O4': (36.832,-1.989,4.661)
C5': (35.560,-0.634,6.151)
P: (37.816,0.008,7.252)
C4': (35.513,-1.779,5.203)
C2': (35.802,-4.128,4.911)
O2': (34.901,-4.642,3.945)
N1: (38.287,-3.831,4.586)
O4: (41.861,-5.384,5.551)
O2: (37.682,-5.890,3.824)
C6: (39.254,-3.013,5.118)
C5: (40.486,-3.449,5.407)
O3': (33.877,-3.202,6.156)
N3: (39.804,-5.577,4.622)
OP1: (38.905,-0.614,6.455)
OP2: (37.477,1.437,7.025)
C2: (38.535,-5.151,4.313)
C1': (36.942,-3.342,4.263)
C3': (35.248,-3.093,5.884)
O5': (36.513,-0.895,7.131)
O4': (36.832,-1.989,4.661)
C5': (35.560,-0.634,6.151)
P: (37.816,0.008,7.252)
C4': (35.513,-1.779,5.203)
C2': (35.802,-4.128,4.911)
O2': (34.901,-4.642,3.945)
N1: (38.287,-3.831,4.586)
O4: (41.861,-5.384,5.551)
O2: (37.682,-5.890,3.824)
C6: (39.254,-3.013,5.118)
C5: (40.486,-3.449,5.407)
O3': (33.877,-3.202,6.156)
OP1: (31.952,-3.137,7.772)
OP2: (34.389,-2.560,8.470)
C3': (33.813,-7.930,8.563)
C1': (35.828,-7.726,7.353)
C5': (32.830,-5.921,7.342)
O4': (34.867,-6.927,6.729)
C8: (36.583,-5.556,8.324)
O2': (35.012,-9.868,7.660)
C6: (40.093,-5.711,8.310)
C5: (38.690,-5.804,8.281)
C4: (38.146,-7.005,7.882)
P: (33.424,-3.386,7.671)
C4': (33.560,-7.232,7.239)
C2': (35.142,-8.645,8.342)
C2: (40.116,-7.891,7.552)
N1: (40.796,-6.783,7.909)
N3: (38.800,-8.106,7.519)
N6: (40.759,-4.635,8.726)
N7: (37.687,-4.893,8.567)
N9: (36.802,-6.816,7.865)
O5': (33.687,-4.937,7.929)
O3': (32.740,-8.852,8.764)
OP2: (34.389,-2.560,8.470)
C3': (33.813,-7.930,8.563)
C1': (35.828,-7.726,7.353)
C5': (32.830,-5.921,7.342)
O4': (34.867,-6.927,6.729)
C8: (36.583,-5.556,8.324)
O2': (35.012,-9.868,7.660)
C6: (40.093,-5.711,8.310)
C5: (38.690,-5.804,8.281)
C4: (38.146,-7.005,7.882)
P: (33.424,-3.386,7.671)
C4': (33.560,-7.232,7.239)
C2': (35.142,-8.645,8.342)
C2: (40.116,-7.891,7.552)
N1: (40.796,-6.783,7.909)
N3: (38.800,-8.106,7.519)
N6: (40.759,-4.635,8.726)
N7: (37.687,-4.893,8.567)
N9: (36.802,-6.816,7.865)
O5': (33.687,-4.937,7.929)
O3': (32.740,-8.852,8.764)
Image (generated by PyMOL):