Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IRW:R52:R53
Extra
PDB:
ATOM 1 O3' C A 51 5.848 -16.246 16.886 1.00 38.99 O
ATOM 2 P U A 52 5.678 -16.320 18.468 1.00 35.18 P
ATOM 3 OP1 U A 52 4.582 -15.398 18.832 1.00 35.17 O
ATOM 4 OP2 U A 52 7.014 -16.216 19.098 1.00 32.01 O
ATOM 5 O5' U A 52 5.147 -17.798 18.677 1.00 36.72 O
ATOM 6 C5' U A 52 3.762 -18.016 18.549 1.00 38.81 C
ATOM 7 C4' U A 52 3.450 -19.465 18.829 1.00 39.95 C
ATOM 8 O4' U A 52 4.398 -20.301 18.132 1.00 39.48 O
ATOM 9 C3' U A 52 3.626 -19.872 20.272 1.00 42.22 C
ATOM 10 O3' U A 52 2.486 -19.468 21.023 1.00 48.13 O
ATOM 11 C2' U A 52 3.738 -21.388 20.129 1.00 38.70 C
ATOM 12 O2' U A 52 2.485 -22.016 19.934 1.00 36.45 O
ATOM 13 C1' U A 52 4.574 -21.501 18.859 1.00 36.87 C
ATOM 14 N1 U A 52 6.016 -21.656 19.096 1.00 34.13 N
ATOM 15 C2 U A 52 6.491 -22.873 19.514 1.00 35.29 C
ATOM 16 O2 U A 52 5.769 -23.832 19.718 1.00 36.56 O
ATOM 17 N3 U A 52 7.848 -22.929 19.699 1.00 36.14 N
ATOM 18 C4 U A 52 8.757 -21.907 19.503 1.00 36.37 C
ATOM 19 O4 U A 52 9.952 -22.113 19.709 1.00 37.70 O
ATOM 20 C5 U A 52 8.178 -20.661 19.061 1.00 34.50 C
ATOM 21 C6 U A 52 6.855 -20.587 18.875 1.00 33.37 C
ATOM 22 P A A 53 2.645 -19.005 22.551 1.00 50.38 P
ATOM 23 OP1 A A 53 1.284 -18.908 23.123 1.00 51.37 O
ATOM 24 OP2 A A 53 3.564 -17.843 22.590 1.00 49.60 O
ATOM 25 O5' A A 53 3.395 -20.235 23.237 1.00 53.19 O
TER
ATOM 1 O3' U B 52 2.486 -19.468 21.023 1.00 48.13 O
ATOM 2 P A B 53 2.645 -19.005 22.551 1.00 50.38 P
ATOM 3 OP1 A B 53 1.284 -18.908 23.123 1.00 51.37 O
ATOM 4 OP2 A B 53 3.564 -17.843 22.590 1.00 49.60 O
ATOM 5 O5' A B 53 3.395 -20.235 23.237 1.00 53.19 O
ATOM 6 C5' A B 53 2.668 -21.381 23.638 1.00 57.37 C
ATOM 7 C4' A B 53 3.650 -22.461 24.026 1.00 62.94 C
ATOM 8 O4' A B 53 4.737 -22.462 23.071 1.00 64.25 O
ATOM 9 C3' A B 53 4.317 -22.231 25.372 1.00 66.53 C
ATOM 10 O3' A B 53 3.565 -22.883 26.387 1.00 69.34 O
ATOM 11 C2' A B 53 5.688 -22.889 25.205 1.00 68.01 C
ATOM 12 O2' A B 53 5.730 -24.205 25.727 1.00 71.52 O
ATOM 13 C1' A B 53 5.917 -22.914 23.694 1.00 65.87 C
ATOM 14 N9 A B 53 7.015 -22.046 23.302 1.00 66.65 N
ATOM 15 C8 A B 53 6.940 -20.739 22.913 1.00 67.28 C
ATOM 16 N7 A B 53 8.108 -20.207 22.631 1.00 68.45 N
ATOM 17 C5 A B 53 9.009 -21.237 22.861 1.00 69.21 C
ATOM 18 C6 A B 53 10.416 -21.324 22.748 1.00 70.28 C
ATOM 19 N6 A B 53 11.193 -20.308 22.355 1.00 70.67 N
ATOM 20 N1 A B 53 10.997 -22.505 23.055 1.00 70.34 N
ATOM 21 C2 A B 53 10.220 -23.522 23.448 1.00 69.66 C
ATOM 22 N3 A B 53 8.895 -23.561 23.590 1.00 68.66 N
ATOM 23 C4 A B 53 8.347 -22.376 23.278 1.00 68.22 C
ATOM 24 P A B 54 2.577 -22.060 27.340 1.00 70.12 P
ATOM 25 OP1 A B 54 1.802 -21.115 26.499 1.00 70.76 O
ATOM 26 OP2 A B 54 3.388 -21.547 28.466 1.00 70.03 O
ATOM 27 O5' A B 54 1.596 -23.203 27.907 1.00 67.05 O
TER
ATOM 2 P U A 52 5.678 -16.320 18.468 1.00 35.18 P
ATOM 3 OP1 U A 52 4.582 -15.398 18.832 1.00 35.17 O
ATOM 4 OP2 U A 52 7.014 -16.216 19.098 1.00 32.01 O
ATOM 5 O5' U A 52 5.147 -17.798 18.677 1.00 36.72 O
ATOM 6 C5' U A 52 3.762 -18.016 18.549 1.00 38.81 C
ATOM 7 C4' U A 52 3.450 -19.465 18.829 1.00 39.95 C
ATOM 8 O4' U A 52 4.398 -20.301 18.132 1.00 39.48 O
ATOM 9 C3' U A 52 3.626 -19.872 20.272 1.00 42.22 C
ATOM 10 O3' U A 52 2.486 -19.468 21.023 1.00 48.13 O
ATOM 11 C2' U A 52 3.738 -21.388 20.129 1.00 38.70 C
ATOM 12 O2' U A 52 2.485 -22.016 19.934 1.00 36.45 O
ATOM 13 C1' U A 52 4.574 -21.501 18.859 1.00 36.87 C
ATOM 14 N1 U A 52 6.016 -21.656 19.096 1.00 34.13 N
ATOM 15 C2 U A 52 6.491 -22.873 19.514 1.00 35.29 C
ATOM 16 O2 U A 52 5.769 -23.832 19.718 1.00 36.56 O
ATOM 17 N3 U A 52 7.848 -22.929 19.699 1.00 36.14 N
ATOM 18 C4 U A 52 8.757 -21.907 19.503 1.00 36.37 C
ATOM 19 O4 U A 52 9.952 -22.113 19.709 1.00 37.70 O
ATOM 20 C5 U A 52 8.178 -20.661 19.061 1.00 34.50 C
ATOM 21 C6 U A 52 6.855 -20.587 18.875 1.00 33.37 C
ATOM 22 P A A 53 2.645 -19.005 22.551 1.00 50.38 P
ATOM 23 OP1 A A 53 1.284 -18.908 23.123 1.00 51.37 O
ATOM 24 OP2 A A 53 3.564 -17.843 22.590 1.00 49.60 O
ATOM 25 O5' A A 53 3.395 -20.235 23.237 1.00 53.19 O
TER
ATOM 1 O3' U B 52 2.486 -19.468 21.023 1.00 48.13 O
ATOM 2 P A B 53 2.645 -19.005 22.551 1.00 50.38 P
ATOM 3 OP1 A B 53 1.284 -18.908 23.123 1.00 51.37 O
ATOM 4 OP2 A B 53 3.564 -17.843 22.590 1.00 49.60 O
ATOM 5 O5' A B 53 3.395 -20.235 23.237 1.00 53.19 O
ATOM 6 C5' A B 53 2.668 -21.381 23.638 1.00 57.37 C
ATOM 7 C4' A B 53 3.650 -22.461 24.026 1.00 62.94 C
ATOM 8 O4' A B 53 4.737 -22.462 23.071 1.00 64.25 O
ATOM 9 C3' A B 53 4.317 -22.231 25.372 1.00 66.53 C
ATOM 10 O3' A B 53 3.565 -22.883 26.387 1.00 69.34 O
ATOM 11 C2' A B 53 5.688 -22.889 25.205 1.00 68.01 C
ATOM 12 O2' A B 53 5.730 -24.205 25.727 1.00 71.52 O
ATOM 13 C1' A B 53 5.917 -22.914 23.694 1.00 65.87 C
ATOM 14 N9 A B 53 7.015 -22.046 23.302 1.00 66.65 N
ATOM 15 C8 A B 53 6.940 -20.739 22.913 1.00 67.28 C
ATOM 16 N7 A B 53 8.108 -20.207 22.631 1.00 68.45 N
ATOM 17 C5 A B 53 9.009 -21.237 22.861 1.00 69.21 C
ATOM 18 C6 A B 53 10.416 -21.324 22.748 1.00 70.28 C
ATOM 19 N6 A B 53 11.193 -20.308 22.355 1.00 70.67 N
ATOM 20 N1 A B 53 10.997 -22.505 23.055 1.00 70.34 N
ATOM 21 C2 A B 53 10.220 -23.522 23.448 1.00 69.66 C
ATOM 22 N3 A B 53 8.895 -23.561 23.590 1.00 68.66 N
ATOM 23 C4 A B 53 8.347 -22.376 23.278 1.00 68.22 C
ATOM 24 P A B 54 2.577 -22.060 27.340 1.00 70.12 P
ATOM 25 OP1 A B 54 1.802 -21.115 26.499 1.00 70.76 O
ATOM 26 OP2 A B 54 3.388 -21.547 28.466 1.00 70.03 O
ATOM 27 O5' A B 54 1.596 -23.203 27.907 1.00 67.05 O
TER
Atoms:
C4: (8.757,-21.907,19.503)
N3: (7.848,-22.929,19.699)
OP1: (4.582,-15.398,18.832)
OP2: (7.014,-16.216,19.098)
C2: (6.491,-22.873,19.514)
C1': (4.574,-21.501,18.859)
C3': (3.626,-19.872,20.272)
O5': (5.147,-17.798,18.677)
O4': (4.398,-20.301,18.132)
C5': (3.762,-18.016,18.549)
P: (5.678,-16.320,18.468)
C4': (3.450,-19.465,18.829)
C2': (3.738,-21.388,20.129)
O2': (2.485,-22.016,19.934)
N1: (6.016,-21.656,19.096)
O4: (9.952,-22.113,19.709)
O2: (5.769,-23.832,19.718)
C6: (6.855,-20.587,18.875)
C5: (8.178,-20.661,19.061)
O3': (2.486,-19.468,21.023)
N3: (7.848,-22.929,19.699)
OP1: (4.582,-15.398,18.832)
OP2: (7.014,-16.216,19.098)
C2: (6.491,-22.873,19.514)
C1': (4.574,-21.501,18.859)
C3': (3.626,-19.872,20.272)
O5': (5.147,-17.798,18.677)
O4': (4.398,-20.301,18.132)
C5': (3.762,-18.016,18.549)
P: (5.678,-16.320,18.468)
C4': (3.450,-19.465,18.829)
C2': (3.738,-21.388,20.129)
O2': (2.485,-22.016,19.934)
N1: (6.016,-21.656,19.096)
O4: (9.952,-22.113,19.709)
O2: (5.769,-23.832,19.718)
C6: (6.855,-20.587,18.875)
C5: (8.178,-20.661,19.061)
O3': (2.486,-19.468,21.023)
OP1: (1.284,-18.908,23.123)
OP2: (3.564,-17.843,22.590)
C3': (4.317,-22.231,25.372)
C1': (5.917,-22.914,23.694)
C5': (2.668,-21.381,23.638)
O4': (4.737,-22.462,23.071)
C8: (6.940,-20.739,22.913)
O2': (5.730,-24.205,25.727)
C6: (10.416,-21.324,22.748)
C5: (9.009,-21.237,22.861)
C4: (8.347,-22.376,23.278)
P: (2.645,-19.005,22.551)
C4': (3.650,-22.461,24.026)
C2': (5.688,-22.889,25.205)
C2: (10.220,-23.522,23.448)
N1: (10.997,-22.505,23.055)
N3: (8.895,-23.561,23.590)
N6: (11.193,-20.308,22.355)
N7: (8.108,-20.207,22.631)
N9: (7.015,-22.046,23.302)
O5': (3.395,-20.235,23.237)
O3': (3.565,-22.883,26.387)
OP2: (3.564,-17.843,22.590)
C3': (4.317,-22.231,25.372)
C1': (5.917,-22.914,23.694)
C5': (2.668,-21.381,23.638)
O4': (4.737,-22.462,23.071)
C8: (6.940,-20.739,22.913)
O2': (5.730,-24.205,25.727)
C6: (10.416,-21.324,22.748)
C5: (9.009,-21.237,22.861)
C4: (8.347,-22.376,23.278)
P: (2.645,-19.005,22.551)
C4': (3.650,-22.461,24.026)
C2': (5.688,-22.889,25.205)
C2: (10.220,-23.522,23.448)
N1: (10.997,-22.505,23.055)
N3: (8.895,-23.561,23.590)
N6: (11.193,-20.308,22.355)
N7: (8.108,-20.207,22.631)
N9: (7.015,-22.046,23.302)
O5': (3.395,-20.235,23.237)
O3': (3.565,-22.883,26.387)
Image (generated by PyMOL):