Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12458:12457
Extra
PDB:
ATOM 1 O3' A A2457 16.630 -65.515 44.097 1.00 46.78 O
ATOM 2 P G A2458 15.389 -65.911 45.031 1.00 51.15 P
ATOM 3 OP1 G A2458 15.416 -65.015 46.208 1.00 50.64 O
ATOM 4 OP2 G A2458 15.433 -67.326 45.247 1.00 51.62 O
ATOM 5 O5' G A2458 14.169 -65.548 44.109 1.00 51.33 O
ATOM 6 C5' G A2458 13.611 -64.248 44.139 1.00 50.94 C
ATOM 7 C4' G A2458 12.614 -64.091 43.053 1.00 51.21 C
ATOM 8 O4' G A2458 13.261 -64.407 41.787 1.00 51.47 O
ATOM 9 C3' G A2458 11.427 -65.042 43.143 1.00 51.69 C
ATOM 10 O3' G A2458 10.350 -64.513 43.914 1.00 51.52 O
ATOM 11 C2' G A2458 11.068 -65.277 41.686 1.00 52.10 C
ATOM 12 O2' G A2458 10.286 -64.188 41.199 1.00 51.93 O
ATOM 13 C1' G A2458 12.440 -65.230 41.008 1.00 52.02 C
ATOM 14 N9 G A2458 13.081 -66.557 40.927 1.00 52.43 N
ATOM 15 C8 G A2458 14.385 -66.769 41.301 1.00 52.26 C
ATOM 16 N7 G A2458 14.754 -68.014 41.148 1.00 52.70 N
ATOM 17 C5 G A2458 13.657 -68.674 40.630 1.00 53.19 C
ATOM 18 C6 G A2458 13.506 -70.035 40.267 1.00 53.80 C
ATOM 19 O6 G A2458 14.350 -70.948 40.329 1.00 54.03 O
ATOM 20 N1 G A2458 12.216 -70.293 39.791 1.00 54.16 N
ATOM 21 C2 G A2458 11.212 -69.350 39.681 1.00 53.97 C
ATOM 22 N2 G A2458 10.028 -69.756 39.210 1.00 54.39 N
ATOM 23 N3 G A2458 11.360 -68.078 40.020 1.00 53.40 N
ATOM 24 C4 G A2458 12.601 -67.794 40.490 1.00 53.03 C
ATOM 25 P C A2459 9.847 -65.277 45.235 1.00 55.06 P
ATOM 26 OP1 C A2459 9.173 -64.298 46.087 1.00 54.67 O
ATOM 27 OP2 C A2459 11.001 -66.011 45.769 1.00 55.06 O
ATOM 28 O5' C A2459 8.803 -66.303 44.705 1.00 55.67 O
TER
ATOM 1 O3' A B2456 20.240 -69.878 40.772 1.00 53.33 O
ATOM 2 P A B2457 20.337 -69.830 42.400 1.00 48.28 P
ATOM 3 OP1 A B2457 21.768 -69.769 42.741 1.00 48.06 O
ATOM 4 OP2 A B2457 19.565 -70.921 42.940 1.00 48.68 O
ATOM 5 O5' A B2457 19.646 -68.445 42.779 1.00 47.76 O
ATOM 6 C5' A B2457 19.157 -68.232 44.092 1.00 47.49 C
ATOM 7 C4' A B2457 18.600 -66.853 44.269 1.00 47.01 C
ATOM 8 O4' A B2457 19.616 -65.895 43.938 1.00 46.62 O
ATOM 9 C3' A B2457 17.407 -66.498 43.410 1.00 47.16 C
ATOM 10 O3' A B2457 16.630 -65.515 44.097 1.00 46.78 O
ATOM 11 C2' A B2457 18.064 -65.841 42.194 1.00 47.08 C
ATOM 12 O2' A B2457 17.228 -64.943 41.492 1.00 46.98 O
ATOM 13 C1' A B2457 19.226 -65.104 42.840 1.00 46.57 C
ATOM 14 N9 A B2457 20.400 -64.967 41.980 1.00 46.56 N
ATOM 15 C8 A B2457 20.902 -65.992 41.215 1.00 47.02 C
ATOM 16 N7 A B2457 21.994 -65.691 40.564 1.00 46.93 N
ATOM 17 C5 A B2457 22.257 -64.407 40.971 1.00 46.38 C
ATOM 18 C6 A B2457 23.309 -63.551 40.641 1.00 46.05 C
ATOM 19 N6 A B2457 24.234 -63.943 39.776 1.00 46.27 N
ATOM 20 N1 A B2457 23.370 -62.305 41.187 1.00 45.51 N
ATOM 21 C2 A B2457 22.387 -61.990 42.028 1.00 45.34 C
ATOM 22 N3 A B2457 21.332 -62.736 42.405 1.00 45.62 N
ATOM 23 C4 A B2457 21.300 -63.945 41.837 1.00 46.14 C
ATOM 24 P G B2458 15.389 -65.911 45.031 1.00 51.15 P
ATOM 25 OP1 G B2458 15.416 -65.015 46.208 1.00 50.64 O
ATOM 26 OP2 G B2458 15.433 -67.326 45.247 1.00 51.62 O
ATOM 27 O5' G B2458 14.169 -65.548 44.109 1.00 51.33 O
TER
ATOM 2 P G A2458 15.389 -65.911 45.031 1.00 51.15 P
ATOM 3 OP1 G A2458 15.416 -65.015 46.208 1.00 50.64 O
ATOM 4 OP2 G A2458 15.433 -67.326 45.247 1.00 51.62 O
ATOM 5 O5' G A2458 14.169 -65.548 44.109 1.00 51.33 O
ATOM 6 C5' G A2458 13.611 -64.248 44.139 1.00 50.94 C
ATOM 7 C4' G A2458 12.614 -64.091 43.053 1.00 51.21 C
ATOM 8 O4' G A2458 13.261 -64.407 41.787 1.00 51.47 O
ATOM 9 C3' G A2458 11.427 -65.042 43.143 1.00 51.69 C
ATOM 10 O3' G A2458 10.350 -64.513 43.914 1.00 51.52 O
ATOM 11 C2' G A2458 11.068 -65.277 41.686 1.00 52.10 C
ATOM 12 O2' G A2458 10.286 -64.188 41.199 1.00 51.93 O
ATOM 13 C1' G A2458 12.440 -65.230 41.008 1.00 52.02 C
ATOM 14 N9 G A2458 13.081 -66.557 40.927 1.00 52.43 N
ATOM 15 C8 G A2458 14.385 -66.769 41.301 1.00 52.26 C
ATOM 16 N7 G A2458 14.754 -68.014 41.148 1.00 52.70 N
ATOM 17 C5 G A2458 13.657 -68.674 40.630 1.00 53.19 C
ATOM 18 C6 G A2458 13.506 -70.035 40.267 1.00 53.80 C
ATOM 19 O6 G A2458 14.350 -70.948 40.329 1.00 54.03 O
ATOM 20 N1 G A2458 12.216 -70.293 39.791 1.00 54.16 N
ATOM 21 C2 G A2458 11.212 -69.350 39.681 1.00 53.97 C
ATOM 22 N2 G A2458 10.028 -69.756 39.210 1.00 54.39 N
ATOM 23 N3 G A2458 11.360 -68.078 40.020 1.00 53.40 N
ATOM 24 C4 G A2458 12.601 -67.794 40.490 1.00 53.03 C
ATOM 25 P C A2459 9.847 -65.277 45.235 1.00 55.06 P
ATOM 26 OP1 C A2459 9.173 -64.298 46.087 1.00 54.67 O
ATOM 27 OP2 C A2459 11.001 -66.011 45.769 1.00 55.06 O
ATOM 28 O5' C A2459 8.803 -66.303 44.705 1.00 55.67 O
TER
ATOM 1 O3' A B2456 20.240 -69.878 40.772 1.00 53.33 O
ATOM 2 P A B2457 20.337 -69.830 42.400 1.00 48.28 P
ATOM 3 OP1 A B2457 21.768 -69.769 42.741 1.00 48.06 O
ATOM 4 OP2 A B2457 19.565 -70.921 42.940 1.00 48.68 O
ATOM 5 O5' A B2457 19.646 -68.445 42.779 1.00 47.76 O
ATOM 6 C5' A B2457 19.157 -68.232 44.092 1.00 47.49 C
ATOM 7 C4' A B2457 18.600 -66.853 44.269 1.00 47.01 C
ATOM 8 O4' A B2457 19.616 -65.895 43.938 1.00 46.62 O
ATOM 9 C3' A B2457 17.407 -66.498 43.410 1.00 47.16 C
ATOM 10 O3' A B2457 16.630 -65.515 44.097 1.00 46.78 O
ATOM 11 C2' A B2457 18.064 -65.841 42.194 1.00 47.08 C
ATOM 12 O2' A B2457 17.228 -64.943 41.492 1.00 46.98 O
ATOM 13 C1' A B2457 19.226 -65.104 42.840 1.00 46.57 C
ATOM 14 N9 A B2457 20.400 -64.967 41.980 1.00 46.56 N
ATOM 15 C8 A B2457 20.902 -65.992 41.215 1.00 47.02 C
ATOM 16 N7 A B2457 21.994 -65.691 40.564 1.00 46.93 N
ATOM 17 C5 A B2457 22.257 -64.407 40.971 1.00 46.38 C
ATOM 18 C6 A B2457 23.309 -63.551 40.641 1.00 46.05 C
ATOM 19 N6 A B2457 24.234 -63.943 39.776 1.00 46.27 N
ATOM 20 N1 A B2457 23.370 -62.305 41.187 1.00 45.51 N
ATOM 21 C2 A B2457 22.387 -61.990 42.028 1.00 45.34 C
ATOM 22 N3 A B2457 21.332 -62.736 42.405 1.00 45.62 N
ATOM 23 C4 A B2457 21.300 -63.945 41.837 1.00 46.14 C
ATOM 24 P G B2458 15.389 -65.911 45.031 1.00 51.15 P
ATOM 25 OP1 G B2458 15.416 -65.015 46.208 1.00 50.64 O
ATOM 26 OP2 G B2458 15.433 -67.326 45.247 1.00 51.62 O
ATOM 27 O5' G B2458 14.169 -65.548 44.109 1.00 51.33 O
TER
Atoms:
OP1: (15.416,-65.015,46.208)
OP2: (15.433,-67.326,45.247)
C3': (11.427,-65.042,43.143)
C1': (12.440,-65.230,41.008)
C5': (13.611,-64.248,44.139)
O6: (14.350,-70.948,40.329)
O4': (13.261,-64.407,41.787)
C8: (14.385,-66.769,41.301)
C2: (11.212,-69.350,39.681)
C6: (13.506,-70.035,40.267)
C5: (13.657,-68.674,40.630)
C4: (12.601,-67.794,40.490)
P: (15.389,-65.911,45.031)
C4': (12.614,-64.091,43.053)
C2': (11.068,-65.277,41.686)
O2': (10.286,-64.188,41.199)
N1: (12.216,-70.293,39.791)
N2: (10.028,-69.756,39.210)
N3: (11.360,-68.078,40.020)
N7: (14.754,-68.014,41.148)
N9: (13.081,-66.557,40.927)
O5': (14.169,-65.548,44.109)
O3': (10.350,-64.513,43.914)
OP2: (15.433,-67.326,45.247)
C3': (11.427,-65.042,43.143)
C1': (12.440,-65.230,41.008)
C5': (13.611,-64.248,44.139)
O6: (14.350,-70.948,40.329)
O4': (13.261,-64.407,41.787)
C8: (14.385,-66.769,41.301)
C2: (11.212,-69.350,39.681)
C6: (13.506,-70.035,40.267)
C5: (13.657,-68.674,40.630)
C4: (12.601,-67.794,40.490)
P: (15.389,-65.911,45.031)
C4': (12.614,-64.091,43.053)
C2': (11.068,-65.277,41.686)
O2': (10.286,-64.188,41.199)
N1: (12.216,-70.293,39.791)
N2: (10.028,-69.756,39.210)
N3: (11.360,-68.078,40.020)
N7: (14.754,-68.014,41.148)
N9: (13.081,-66.557,40.927)
O5': (14.169,-65.548,44.109)
O3': (10.350,-64.513,43.914)
OP1: (21.768,-69.769,42.741)
OP2: (19.565,-70.921,42.940)
C3': (17.407,-66.498,43.410)
C1': (19.226,-65.104,42.840)
C5': (19.157,-68.232,44.092)
O4': (19.616,-65.895,43.938)
C8: (20.902,-65.992,41.215)
O2': (17.228,-64.943,41.492)
C6: (23.309,-63.551,40.641)
C5: (22.257,-64.407,40.971)
C4: (21.300,-63.945,41.837)
P: (20.337,-69.830,42.400)
C4': (18.600,-66.853,44.269)
C2': (18.064,-65.841,42.194)
C2: (22.387,-61.990,42.028)
N1: (23.370,-62.305,41.187)
N3: (21.332,-62.736,42.405)
N6: (24.234,-63.943,39.776)
N7: (21.994,-65.691,40.564)
N9: (20.400,-64.967,41.980)
O5': (19.646,-68.445,42.779)
O3': (16.630,-65.515,44.097)
OP2: (19.565,-70.921,42.940)
C3': (17.407,-66.498,43.410)
C1': (19.226,-65.104,42.840)
C5': (19.157,-68.232,44.092)
O4': (19.616,-65.895,43.938)
C8: (20.902,-65.992,41.215)
O2': (17.228,-64.943,41.492)
C6: (23.309,-63.551,40.641)
C5: (22.257,-64.407,40.971)
C4: (21.300,-63.945,41.837)
P: (20.337,-69.830,42.400)
C4': (18.600,-66.853,44.269)
C2': (18.064,-65.841,42.194)
C2: (22.387,-61.990,42.028)
N1: (23.370,-62.305,41.187)
N3: (21.332,-62.736,42.405)
N6: (24.234,-63.943,39.776)
N7: (21.994,-65.691,40.564)
N9: (20.400,-64.967,41.980)
O5': (19.646,-68.445,42.779)
O3': (16.630,-65.515,44.097)
Image (generated by PyMOL):