Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01139:01140
Extra
PDB:
ATOM 1 O3' C A1138 80.721 73.215 171.150 1.00138.97 O
ATOM 2 P U A1139 79.344 72.445 170.836 1.00138.48 P
ATOM 3 OP1 U A1139 79.618 71.398 169.816 1.00138.40 O
ATOM 4 OP2 U A1139 78.308 73.475 170.568 1.00138.61 O
ATOM 5 O5' U A1139 78.986 71.730 172.213 1.00137.57 O
ATOM 6 C5' U A1139 79.799 70.656 172.707 1.00137.06 C
ATOM 7 C4' U A1139 79.308 70.190 174.057 1.00137.12 C
ATOM 8 O4' U A1139 79.445 71.254 175.036 1.00136.85 O
ATOM 9 C3' U A1139 77.842 69.811 174.175 1.00137.02 C
ATOM 10 O3' U A1139 77.565 68.523 173.636 1.00136.95 O
ATOM 11 C2' U A1139 77.642 69.844 175.684 1.00136.96 C
ATOM 12 O2' U A1139 78.150 68.694 176.334 1.00137.18 O
ATOM 13 C1' U A1139 78.495 71.054 176.073 1.00136.55 C
ATOM 14 N1 U A1139 77.699 72.279 176.258 1.00136.05 N
ATOM 15 C2 U A1139 77.233 72.547 177.539 1.00136.07 C
ATOM 16 O2 U A1139 77.460 71.825 178.496 1.00136.57 O
ATOM 17 N3 U A1139 76.488 73.692 177.658 1.00135.76 N
ATOM 18 C4 U A1139 76.164 74.579 176.659 1.00135.73 C
ATOM 19 O4 U A1139 75.473 75.562 176.929 1.00135.75 O
ATOM 20 C5 U A1139 76.681 74.240 175.365 1.00135.61 C
ATOM 21 C6 U A1139 77.414 73.130 175.212 1.00135.74 C
ATOM 22 P A A1140 76.073 68.168 173.151 1.00137.11 P
ATOM 23 OP1 A A1140 76.140 66.830 172.502 1.00136.98 O
ATOM 24 OP2 A A1140 75.525 69.323 172.395 1.00137.30 O
ATOM 25 O5' A A1140 75.236 68.037 174.502 1.00137.04 O
TER
ATOM 1 O3' U B1139 77.565 68.523 173.636 1.00136.95 O
ATOM 2 P A B1140 76.073 68.168 173.151 1.00137.11 P
ATOM 3 OP1 A B1140 76.140 66.830 172.502 1.00136.98 O
ATOM 4 OP2 A B1140 75.525 69.323 172.395 1.00137.30 O
ATOM 5 O5' A B1140 75.236 68.037 174.502 1.00137.04 O
ATOM 6 C5' A B1140 75.490 66.959 175.427 1.00136.81 C
ATOM 7 C4' A B1140 74.932 67.287 176.795 1.00135.45 C
ATOM 8 O4' A B1140 75.430 68.591 177.205 1.00135.69 O
ATOM 9 C3' A B1140 73.422 67.431 176.896 1.00134.32 C
ATOM 10 O3' A B1140 72.755 66.179 177.022 1.00131.45 O
ATOM 11 C2' A B1140 73.276 68.296 178.141 1.00135.12 C
ATOM 12 O2' A B1140 73.465 67.581 179.349 1.00135.83 O
ATOM 13 C1' A B1140 74.434 69.273 177.951 1.00135.34 C
ATOM 14 N9 A B1140 74.024 70.459 177.196 1.00135.72 N
ATOM 15 C8 A B1140 74.053 70.654 175.833 1.00135.66 C
ATOM 16 N7 A B1140 73.608 71.830 175.458 1.00136.09 N
ATOM 17 C5 A B1140 73.264 72.452 176.653 1.00136.00 C
ATOM 18 C6 A B1140 72.733 73.725 176.941 1.00135.67 C
ATOM 19 N6 A B1140 72.434 74.635 176.009 1.00135.29 N
ATOM 20 N1 A B1140 72.514 74.032 178.238 1.00135.11 N
ATOM 21 C2 A B1140 72.802 73.118 179.173 1.00135.16 C
ATOM 22 N3 A B1140 73.298 71.893 179.029 1.00135.30 N
ATOM 23 C4 A B1140 73.514 71.618 177.730 1.00135.81 C
ATOM 24 P C B1141 71.244 66.024 176.489 1.00129.10 P
ATOM 25 OP1 C B1141 70.692 64.770 177.057 1.00129.53 O
ATOM 26 OP2 C B1141 71.247 66.222 175.015 1.00128.84 O
ATOM 27 O5' C B1141 70.462 67.243 177.155 1.00127.35 O
TER
ATOM 2 P U A1139 79.344 72.445 170.836 1.00138.48 P
ATOM 3 OP1 U A1139 79.618 71.398 169.816 1.00138.40 O
ATOM 4 OP2 U A1139 78.308 73.475 170.568 1.00138.61 O
ATOM 5 O5' U A1139 78.986 71.730 172.213 1.00137.57 O
ATOM 6 C5' U A1139 79.799 70.656 172.707 1.00137.06 C
ATOM 7 C4' U A1139 79.308 70.190 174.057 1.00137.12 C
ATOM 8 O4' U A1139 79.445 71.254 175.036 1.00136.85 O
ATOM 9 C3' U A1139 77.842 69.811 174.175 1.00137.02 C
ATOM 10 O3' U A1139 77.565 68.523 173.636 1.00136.95 O
ATOM 11 C2' U A1139 77.642 69.844 175.684 1.00136.96 C
ATOM 12 O2' U A1139 78.150 68.694 176.334 1.00137.18 O
ATOM 13 C1' U A1139 78.495 71.054 176.073 1.00136.55 C
ATOM 14 N1 U A1139 77.699 72.279 176.258 1.00136.05 N
ATOM 15 C2 U A1139 77.233 72.547 177.539 1.00136.07 C
ATOM 16 O2 U A1139 77.460 71.825 178.496 1.00136.57 O
ATOM 17 N3 U A1139 76.488 73.692 177.658 1.00135.76 N
ATOM 18 C4 U A1139 76.164 74.579 176.659 1.00135.73 C
ATOM 19 O4 U A1139 75.473 75.562 176.929 1.00135.75 O
ATOM 20 C5 U A1139 76.681 74.240 175.365 1.00135.61 C
ATOM 21 C6 U A1139 77.414 73.130 175.212 1.00135.74 C
ATOM 22 P A A1140 76.073 68.168 173.151 1.00137.11 P
ATOM 23 OP1 A A1140 76.140 66.830 172.502 1.00136.98 O
ATOM 24 OP2 A A1140 75.525 69.323 172.395 1.00137.30 O
ATOM 25 O5' A A1140 75.236 68.037 174.502 1.00137.04 O
TER
ATOM 1 O3' U B1139 77.565 68.523 173.636 1.00136.95 O
ATOM 2 P A B1140 76.073 68.168 173.151 1.00137.11 P
ATOM 3 OP1 A B1140 76.140 66.830 172.502 1.00136.98 O
ATOM 4 OP2 A B1140 75.525 69.323 172.395 1.00137.30 O
ATOM 5 O5' A B1140 75.236 68.037 174.502 1.00137.04 O
ATOM 6 C5' A B1140 75.490 66.959 175.427 1.00136.81 C
ATOM 7 C4' A B1140 74.932 67.287 176.795 1.00135.45 C
ATOM 8 O4' A B1140 75.430 68.591 177.205 1.00135.69 O
ATOM 9 C3' A B1140 73.422 67.431 176.896 1.00134.32 C
ATOM 10 O3' A B1140 72.755 66.179 177.022 1.00131.45 O
ATOM 11 C2' A B1140 73.276 68.296 178.141 1.00135.12 C
ATOM 12 O2' A B1140 73.465 67.581 179.349 1.00135.83 O
ATOM 13 C1' A B1140 74.434 69.273 177.951 1.00135.34 C
ATOM 14 N9 A B1140 74.024 70.459 177.196 1.00135.72 N
ATOM 15 C8 A B1140 74.053 70.654 175.833 1.00135.66 C
ATOM 16 N7 A B1140 73.608 71.830 175.458 1.00136.09 N
ATOM 17 C5 A B1140 73.264 72.452 176.653 1.00136.00 C
ATOM 18 C6 A B1140 72.733 73.725 176.941 1.00135.67 C
ATOM 19 N6 A B1140 72.434 74.635 176.009 1.00135.29 N
ATOM 20 N1 A B1140 72.514 74.032 178.238 1.00135.11 N
ATOM 21 C2 A B1140 72.802 73.118 179.173 1.00135.16 C
ATOM 22 N3 A B1140 73.298 71.893 179.029 1.00135.30 N
ATOM 23 C4 A B1140 73.514 71.618 177.730 1.00135.81 C
ATOM 24 P C B1141 71.244 66.024 176.489 1.00129.10 P
ATOM 25 OP1 C B1141 70.692 64.770 177.057 1.00129.53 O
ATOM 26 OP2 C B1141 71.247 66.222 175.015 1.00128.84 O
ATOM 27 O5' C B1141 70.462 67.243 177.155 1.00127.35 O
TER
Atoms:
C4: (76.164,74.579,176.659)
N3: (76.488,73.692,177.658)
OP1: (79.618,71.398,169.816)
OP2: (78.308,73.475,170.568)
C2: (77.233,72.547,177.539)
C1': (78.495,71.054,176.073)
C3': (77.842,69.811,174.175)
O5': (78.986,71.730,172.213)
O4': (79.445,71.254,175.036)
C5': (79.799,70.656,172.707)
P: (79.344,72.445,170.836)
C4': (79.308,70.190,174.057)
C2': (77.642,69.844,175.684)
O2': (78.150,68.694,176.334)
N1: (77.699,72.279,176.258)
O4: (75.473,75.562,176.929)
O2: (77.460,71.825,178.496)
C6: (77.414,73.130,175.212)
C5: (76.681,74.240,175.365)
O3': (77.565,68.523,173.636)
N3: (76.488,73.692,177.658)
OP1: (79.618,71.398,169.816)
OP2: (78.308,73.475,170.568)
C2: (77.233,72.547,177.539)
C1': (78.495,71.054,176.073)
C3': (77.842,69.811,174.175)
O5': (78.986,71.730,172.213)
O4': (79.445,71.254,175.036)
C5': (79.799,70.656,172.707)
P: (79.344,72.445,170.836)
C4': (79.308,70.190,174.057)
C2': (77.642,69.844,175.684)
O2': (78.150,68.694,176.334)
N1: (77.699,72.279,176.258)
O4: (75.473,75.562,176.929)
O2: (77.460,71.825,178.496)
C6: (77.414,73.130,175.212)
C5: (76.681,74.240,175.365)
O3': (77.565,68.523,173.636)
OP1: (76.140,66.830,172.502)
OP2: (75.525,69.323,172.395)
C3': (73.422,67.431,176.896)
C1': (74.434,69.273,177.951)
C5': (75.490,66.959,175.427)
O4': (75.430,68.591,177.205)
C8: (74.053,70.654,175.833)
O2': (73.465,67.581,179.349)
C6: (72.733,73.725,176.941)
C5: (73.264,72.452,176.653)
C4: (73.514,71.618,177.730)
P: (76.073,68.168,173.151)
C4': (74.932,67.287,176.795)
C2': (73.276,68.296,178.141)
C2: (72.802,73.118,179.173)
N1: (72.514,74.032,178.238)
N3: (73.298,71.893,179.029)
N6: (72.434,74.635,176.009)
N7: (73.608,71.830,175.458)
N9: (74.024,70.459,177.196)
O5': (75.236,68.037,174.502)
O3': (72.755,66.179,177.022)
OP2: (75.525,69.323,172.395)
C3': (73.422,67.431,176.896)
C1': (74.434,69.273,177.951)
C5': (75.490,66.959,175.427)
O4': (75.430,68.591,177.205)
C8: (74.053,70.654,175.833)
O2': (73.465,67.581,179.349)
C6: (72.733,73.725,176.941)
C5: (73.264,72.452,176.653)
C4: (73.514,71.618,177.730)
P: (76.073,68.168,173.151)
C4': (74.932,67.287,176.795)
C2': (73.276,68.296,178.141)
C2: (72.802,73.118,179.173)
N1: (72.514,74.032,178.238)
N3: (73.298,71.893,179.029)
N6: (72.434,74.635,176.009)
N7: (73.608,71.830,175.458)
N9: (74.024,70.459,177.196)
O5': (75.236,68.037,174.502)
O3': (72.755,66.179,177.022)
Image (generated by PyMOL):