Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIM:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.263 52.010 6.619 1.00 32.76 O
ATOM 2 P G A 42 0.253 52.155 6.120 1.00 33.27 P
ATOM 3 OP1 G A 42 0.734 53.496 6.528 1.00 33.56 O
ATOM 4 OP2 G A 42 0.324 51.764 4.693 1.00 32.93 O
ATOM 5 O5' G A 42 1.001 51.034 6.972 1.00 33.19 O
ATOM 6 C5' G A 42 1.282 51.215 8.355 1.00 33.92 C
ATOM 7 C4' G A 42 1.405 49.860 9.034 1.00 34.41 C
ATOM 8 O4' G A 42 0.236 49.071 8.689 1.00 34.96 O
ATOM 9 C3' G A 42 2.620 49.020 8.643 1.00 34.39 C
ATOM 10 O3' G A 42 3.091 48.246 9.754 1.00 34.27 O
ATOM 11 C2' G A 42 2.064 48.127 7.537 1.00 34.85 C
ATOM 12 O2' G A 42 2.700 46.868 7.411 1.00 36.22 O
ATOM 13 C1' G A 42 0.623 47.913 7.981 1.00 34.60 C
ATOM 14 N9 G A 42 -0.213 47.730 6.802 1.00 34.51 N
ATOM 15 C8 G A 42 -0.910 48.674 6.077 1.00 34.28 C
ATOM 16 N7 G A 42 -1.544 48.176 5.049 1.00 33.59 N
ATOM 17 C5 G A 42 -1.236 46.823 5.094 1.00 33.85 C
ATOM 18 C6 G A 42 -1.628 45.764 4.246 1.00 33.60 C
ATOM 19 O6 G A 42 -2.351 45.816 3.248 1.00 34.10 O
ATOM 20 N1 G A 42 -1.093 44.544 4.655 1.00 33.48 N
ATOM 21 C2 G A 42 -0.273 44.371 5.746 1.00 33.29 C
ATOM 22 N2 G A 42 0.155 43.130 5.987 1.00 33.26 N
ATOM 23 N3 G A 42 0.107 45.348 6.549 1.00 33.57 N
ATOM 24 C4 G A 42 -0.415 46.537 6.164 1.00 34.04 C
ATOM 25 P G A 43 4.663 48.060 10.040 1.00 33.61 P
ATOM 26 OP1 G A 43 4.786 46.973 11.031 1.00 32.86 O
ATOM 27 OP2 G A 43 5.208 49.412 10.320 1.00 34.14 O
ATOM 28 O5' G A 43 5.292 47.537 8.659 1.00 33.42 O
TER
ATOM 1 O3' C B 40 -3.342 55.606 1.825 1.00 33.63 O
ATOM 2 P A B 41 -3.426 54.160 2.506 1.00 32.34 P
ATOM 3 OP1 A B 41 -2.106 53.501 2.371 1.00 32.57 O
ATOM 4 OP2 A B 41 -4.641 53.469 2.014 1.00 31.94 O
ATOM 5 O5' A B 41 -3.674 54.573 4.032 1.00 32.07 O
ATOM 6 C5' A B 41 -2.577 54.920 4.866 1.00 31.64 C
ATOM 7 C4' A B 41 -2.576 54.017 6.087 1.00 31.52 C
ATOM 8 O4' A B 41 -3.872 54.116 6.725 1.00 30.74 O
ATOM 9 C3' A B 41 -2.349 52.522 5.822 1.00 31.65 C
ATOM 10 O3' A B 41 -1.263 52.010 6.619 1.00 32.76 O
ATOM 11 C2' A B 41 -3.680 51.872 6.202 1.00 30.77 C
ATOM 12 O2' A B 41 -3.502 50.574 6.737 1.00 30.19 O
ATOM 13 C1' A B 41 -4.179 52.853 7.262 1.00 30.00 C
ATOM 14 N9 A B 41 -5.609 52.827 7.557 1.00 29.22 N
ATOM 15 C8 A B 41 -6.645 52.858 6.661 1.00 29.02 C
ATOM 16 N7 A B 41 -7.831 52.826 7.220 1.00 28.75 N
ATOM 17 C5 A B 41 -7.552 52.779 8.579 1.00 28.55 C
ATOM 18 C6 A B 41 -8.380 52.725 9.720 1.00 27.98 C
ATOM 19 N6 A B 41 -9.709 52.712 9.629 1.00 28.81 N
ATOM 20 N1 A B 41 -7.803 52.689 10.944 1.00 27.36 N
ATOM 21 C2 A B 41 -6.464 52.702 11.008 1.00 27.90 C
ATOM 22 N3 A B 41 -5.575 52.742 10.007 1.00 28.16 N
ATOM 23 C4 A B 41 -6.187 52.783 8.807 1.00 28.65 C
ATOM 24 P G B 42 0.253 52.155 6.120 1.00 33.27 P
ATOM 25 OP1 G B 42 0.734 53.496 6.528 1.00 33.56 O
ATOM 26 OP2 G B 42 0.324 51.764 4.693 1.00 32.93 O
ATOM 27 O5' G B 42 1.001 51.034 6.972 1.00 33.19 O
TER
ATOM 2 P G A 42 0.253 52.155 6.120 1.00 33.27 P
ATOM 3 OP1 G A 42 0.734 53.496 6.528 1.00 33.56 O
ATOM 4 OP2 G A 42 0.324 51.764 4.693 1.00 32.93 O
ATOM 5 O5' G A 42 1.001 51.034 6.972 1.00 33.19 O
ATOM 6 C5' G A 42 1.282 51.215 8.355 1.00 33.92 C
ATOM 7 C4' G A 42 1.405 49.860 9.034 1.00 34.41 C
ATOM 8 O4' G A 42 0.236 49.071 8.689 1.00 34.96 O
ATOM 9 C3' G A 42 2.620 49.020 8.643 1.00 34.39 C
ATOM 10 O3' G A 42 3.091 48.246 9.754 1.00 34.27 O
ATOM 11 C2' G A 42 2.064 48.127 7.537 1.00 34.85 C
ATOM 12 O2' G A 42 2.700 46.868 7.411 1.00 36.22 O
ATOM 13 C1' G A 42 0.623 47.913 7.981 1.00 34.60 C
ATOM 14 N9 G A 42 -0.213 47.730 6.802 1.00 34.51 N
ATOM 15 C8 G A 42 -0.910 48.674 6.077 1.00 34.28 C
ATOM 16 N7 G A 42 -1.544 48.176 5.049 1.00 33.59 N
ATOM 17 C5 G A 42 -1.236 46.823 5.094 1.00 33.85 C
ATOM 18 C6 G A 42 -1.628 45.764 4.246 1.00 33.60 C
ATOM 19 O6 G A 42 -2.351 45.816 3.248 1.00 34.10 O
ATOM 20 N1 G A 42 -1.093 44.544 4.655 1.00 33.48 N
ATOM 21 C2 G A 42 -0.273 44.371 5.746 1.00 33.29 C
ATOM 22 N2 G A 42 0.155 43.130 5.987 1.00 33.26 N
ATOM 23 N3 G A 42 0.107 45.348 6.549 1.00 33.57 N
ATOM 24 C4 G A 42 -0.415 46.537 6.164 1.00 34.04 C
ATOM 25 P G A 43 4.663 48.060 10.040 1.00 33.61 P
ATOM 26 OP1 G A 43 4.786 46.973 11.031 1.00 32.86 O
ATOM 27 OP2 G A 43 5.208 49.412 10.320 1.00 34.14 O
ATOM 28 O5' G A 43 5.292 47.537 8.659 1.00 33.42 O
TER
ATOM 1 O3' C B 40 -3.342 55.606 1.825 1.00 33.63 O
ATOM 2 P A B 41 -3.426 54.160 2.506 1.00 32.34 P
ATOM 3 OP1 A B 41 -2.106 53.501 2.371 1.00 32.57 O
ATOM 4 OP2 A B 41 -4.641 53.469 2.014 1.00 31.94 O
ATOM 5 O5' A B 41 -3.674 54.573 4.032 1.00 32.07 O
ATOM 6 C5' A B 41 -2.577 54.920 4.866 1.00 31.64 C
ATOM 7 C4' A B 41 -2.576 54.017 6.087 1.00 31.52 C
ATOM 8 O4' A B 41 -3.872 54.116 6.725 1.00 30.74 O
ATOM 9 C3' A B 41 -2.349 52.522 5.822 1.00 31.65 C
ATOM 10 O3' A B 41 -1.263 52.010 6.619 1.00 32.76 O
ATOM 11 C2' A B 41 -3.680 51.872 6.202 1.00 30.77 C
ATOM 12 O2' A B 41 -3.502 50.574 6.737 1.00 30.19 O
ATOM 13 C1' A B 41 -4.179 52.853 7.262 1.00 30.00 C
ATOM 14 N9 A B 41 -5.609 52.827 7.557 1.00 29.22 N
ATOM 15 C8 A B 41 -6.645 52.858 6.661 1.00 29.02 C
ATOM 16 N7 A B 41 -7.831 52.826 7.220 1.00 28.75 N
ATOM 17 C5 A B 41 -7.552 52.779 8.579 1.00 28.55 C
ATOM 18 C6 A B 41 -8.380 52.725 9.720 1.00 27.98 C
ATOM 19 N6 A B 41 -9.709 52.712 9.629 1.00 28.81 N
ATOM 20 N1 A B 41 -7.803 52.689 10.944 1.00 27.36 N
ATOM 21 C2 A B 41 -6.464 52.702 11.008 1.00 27.90 C
ATOM 22 N3 A B 41 -5.575 52.742 10.007 1.00 28.16 N
ATOM 23 C4 A B 41 -6.187 52.783 8.807 1.00 28.65 C
ATOM 24 P G B 42 0.253 52.155 6.120 1.00 33.27 P
ATOM 25 OP1 G B 42 0.734 53.496 6.528 1.00 33.56 O
ATOM 26 OP2 G B 42 0.324 51.764 4.693 1.00 32.93 O
ATOM 27 O5' G B 42 1.001 51.034 6.972 1.00 33.19 O
TER
Atoms:
OP1: (0.734,53.496,6.528)
OP2: (0.324,51.764,4.693)
C3': (2.620,49.020,8.643)
C1': (0.623,47.913,7.981)
C5': (1.282,51.215,8.355)
O6: (-2.351,45.816,3.248)
O4': (0.236,49.071,8.689)
C8: (-0.910,48.674,6.077)
C2: (-0.273,44.371,5.746)
C6: (-1.628,45.764,4.246)
C5: (-1.236,46.823,5.094)
C4: (-0.415,46.537,6.164)
P: (0.253,52.155,6.120)
C4': (1.405,49.860,9.034)
C2': (2.064,48.127,7.537)
O2': (2.700,46.868,7.411)
N1: (-1.093,44.544,4.655)
N2: (0.155,43.130,5.987)
N3: (0.107,45.348,6.549)
N7: (-1.544,48.176,5.049)
N9: (-0.213,47.730,6.802)
O5': (1.001,51.034,6.972)
O3': (3.091,48.246,9.754)
OP2: (0.324,51.764,4.693)
C3': (2.620,49.020,8.643)
C1': (0.623,47.913,7.981)
C5': (1.282,51.215,8.355)
O6: (-2.351,45.816,3.248)
O4': (0.236,49.071,8.689)
C8: (-0.910,48.674,6.077)
C2: (-0.273,44.371,5.746)
C6: (-1.628,45.764,4.246)
C5: (-1.236,46.823,5.094)
C4: (-0.415,46.537,6.164)
P: (0.253,52.155,6.120)
C4': (1.405,49.860,9.034)
C2': (2.064,48.127,7.537)
O2': (2.700,46.868,7.411)
N1: (-1.093,44.544,4.655)
N2: (0.155,43.130,5.987)
N3: (0.107,45.348,6.549)
N7: (-1.544,48.176,5.049)
N9: (-0.213,47.730,6.802)
O5': (1.001,51.034,6.972)
O3': (3.091,48.246,9.754)
OP1: (-2.106,53.501,2.371)
OP2: (-4.641,53.469,2.014)
C3': (-2.349,52.522,5.822)
C1': (-4.179,52.853,7.262)
C5': (-2.577,54.920,4.866)
O4': (-3.872,54.116,6.725)
C8: (-6.645,52.858,6.661)
O2': (-3.502,50.574,6.737)
C6: (-8.380,52.725,9.720)
C5: (-7.552,52.779,8.579)
C4: (-6.187,52.783,8.807)
P: (-3.426,54.160,2.506)
C4': (-2.576,54.017,6.087)
C2': (-3.680,51.872,6.202)
C2: (-6.464,52.702,11.008)
N1: (-7.803,52.689,10.944)
N3: (-5.575,52.742,10.007)
N6: (-9.709,52.712,9.629)
N7: (-7.831,52.826,7.220)
N9: (-5.609,52.827,7.557)
O5': (-3.674,54.573,4.032)
O3': (-1.263,52.010,6.619)
OP2: (-4.641,53.469,2.014)
C3': (-2.349,52.522,5.822)
C1': (-4.179,52.853,7.262)
C5': (-2.577,54.920,4.866)
O4': (-3.872,54.116,6.725)
C8: (-6.645,52.858,6.661)
O2': (-3.502,50.574,6.737)
C6: (-8.380,52.725,9.720)
C5: (-7.552,52.779,8.579)
C4: (-6.187,52.783,8.807)
P: (-3.426,54.160,2.506)
C4': (-2.576,54.017,6.087)
C2': (-3.680,51.872,6.202)
C2: (-6.464,52.702,11.008)
N1: (-7.803,52.689,10.944)
N3: (-5.575,52.742,10.007)
N6: (-9.709,52.712,9.629)
N7: (-7.831,52.826,7.220)
N9: (-5.609,52.827,7.557)
O5': (-3.674,54.573,4.032)
O3': (-1.263,52.010,6.619)
Image (generated by PyMOL):