Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11007:11006
Extra
PDB:
ATOM 1 O3' A A1006 63.578 -56.383 30.276 1.00 48.03 O
ATOM 2 P G A1007 64.658 -55.936 31.354 1.00 69.45 P
ATOM 3 OP1 G A1007 64.031 -54.942 32.229 1.00 68.89 O
ATOM 4 OP2 G A1007 65.864 -55.562 30.616 1.00 69.60 O
ATOM 5 O5' G A1007 64.912 -57.261 32.164 1.00 69.72 O
ATOM 6 C5' G A1007 64.077 -57.622 33.243 1.00 69.54 C
ATOM 7 C4' G A1007 64.488 -58.944 33.822 1.00 69.89 C
ATOM 8 O4' G A1007 64.298 -59.979 32.822 1.00 70.43 O
ATOM 9 C3' G A1007 65.942 -59.020 34.233 1.00 69.98 C
ATOM 10 O3' G A1007 66.084 -59.907 35.341 1.00 70.08 O
ATOM 11 C2' G A1007 66.609 -59.606 33.001 1.00 70.49 C
ATOM 12 O2' G A1007 67.843 -60.252 33.241 1.00 70.80 O
ATOM 13 C1' G A1007 65.538 -60.561 32.476 1.00 70.82 C
ATOM 14 N9 G A1007 65.566 -60.702 31.018 1.00 71.18 N
ATOM 15 C8 G A1007 65.191 -59.681 30.188 1.00 70.98 C
ATOM 16 N7 G A1007 65.312 -59.953 28.924 1.00 71.37 N
ATOM 17 C5 G A1007 65.806 -61.250 28.897 1.00 71.88 C
ATOM 18 C6 G A1007 66.118 -62.072 27.766 1.00 72.46 C
ATOM 19 O6 G A1007 66.037 -61.817 26.546 1.00 72.66 O
ATOM 20 N1 G A1007 66.563 -63.321 28.180 1.00 72.86 N
ATOM 21 C2 G A1007 66.692 -63.727 29.486 1.00 72.72 C
ATOM 22 N2 G A1007 67.152 -64.980 29.631 1.00 73.20 N
ATOM 23 N3 G A1007 66.410 -62.974 30.549 1.00 72.18 N
ATOM 24 C4 G A1007 65.972 -61.741 30.189 1.00 71.77 C
ATOM 25 P A A1008 66.941 -59.452 36.616 1.00 98.95 P
ATOM 26 OP1 A A1008 66.041 -58.676 37.506 1.00 98.43 O
ATOM 27 OP2 A A1008 68.179 -58.811 36.100 1.00 98.96 O
ATOM 28 O5' A A1008 67.297 -60.831 37.285 1.00 99.34 O
TER
ATOM 1 O3' A B1005 58.474 -57.228 33.614 1.00 48.08 O
ATOM 2 P A B1006 60.016 -56.797 33.785 1.00 47.13 P
ATOM 3 OP1 A B1006 60.744 -58.065 34.139 1.00 47.52 O
ATOM 4 OP2 A B1006 60.075 -55.644 34.728 1.00 46.58 O
ATOM 5 O5' A B1006 60.426 -56.324 32.319 1.00 47.31 O
ATOM 6 C5' A B1006 60.712 -57.280 31.325 1.00 47.85 C
ATOM 7 C4' A B1006 61.174 -56.641 30.057 1.00 47.96 C
ATOM 8 O4' A B1006 60.131 -55.820 29.511 1.00 47.75 O
ATOM 9 C3' A B1006 62.342 -55.702 30.181 1.00 47.73 C
ATOM 10 O3' A B1006 63.578 -56.383 30.276 1.00 48.03 O
ATOM 11 C2' A B1006 62.212 -54.872 28.923 1.00 47.75 C
ATOM 12 O2' A B1006 62.713 -55.599 27.814 1.00 48.28 O
ATOM 13 C1' A B1006 60.700 -54.768 28.779 1.00 47.64 C
ATOM 14 N9 A B1006 60.166 -53.492 29.282 1.00 47.09 N
ATOM 15 C8 A B1006 59.764 -53.134 30.538 1.00 46.67 C
ATOM 16 N7 A B1006 59.286 -51.910 30.610 1.00 46.27 N
ATOM 17 C5 A B1006 59.375 -51.437 29.319 1.00 46.43 C
ATOM 18 C6 A B1006 59.045 -50.209 28.723 1.00 46.20 C
ATOM 19 N6 A B1006 58.533 -49.172 29.378 1.00 45.73 N
ATOM 20 N1 A B1006 59.229 -50.057 27.401 1.00 46.48 N
ATOM 21 C2 A B1006 59.735 -51.094 26.735 1.00 46.97 C
ATOM 22 N3 A B1006 60.096 -52.289 27.188 1.00 47.23 N
ATOM 23 C4 A B1006 59.888 -52.400 28.500 1.00 46.93 C
ATOM 24 P G B1007 64.658 -55.936 31.354 1.00 69.45 P
ATOM 25 OP1 G B1007 64.031 -54.942 32.229 1.00 68.89 O
ATOM 26 OP2 G B1007 65.864 -55.562 30.616 1.00 69.60 O
ATOM 27 O5' G B1007 64.912 -57.261 32.164 1.00 69.72 O
TER
ATOM 2 P G A1007 64.658 -55.936 31.354 1.00 69.45 P
ATOM 3 OP1 G A1007 64.031 -54.942 32.229 1.00 68.89 O
ATOM 4 OP2 G A1007 65.864 -55.562 30.616 1.00 69.60 O
ATOM 5 O5' G A1007 64.912 -57.261 32.164 1.00 69.72 O
ATOM 6 C5' G A1007 64.077 -57.622 33.243 1.00 69.54 C
ATOM 7 C4' G A1007 64.488 -58.944 33.822 1.00 69.89 C
ATOM 8 O4' G A1007 64.298 -59.979 32.822 1.00 70.43 O
ATOM 9 C3' G A1007 65.942 -59.020 34.233 1.00 69.98 C
ATOM 10 O3' G A1007 66.084 -59.907 35.341 1.00 70.08 O
ATOM 11 C2' G A1007 66.609 -59.606 33.001 1.00 70.49 C
ATOM 12 O2' G A1007 67.843 -60.252 33.241 1.00 70.80 O
ATOM 13 C1' G A1007 65.538 -60.561 32.476 1.00 70.82 C
ATOM 14 N9 G A1007 65.566 -60.702 31.018 1.00 71.18 N
ATOM 15 C8 G A1007 65.191 -59.681 30.188 1.00 70.98 C
ATOM 16 N7 G A1007 65.312 -59.953 28.924 1.00 71.37 N
ATOM 17 C5 G A1007 65.806 -61.250 28.897 1.00 71.88 C
ATOM 18 C6 G A1007 66.118 -62.072 27.766 1.00 72.46 C
ATOM 19 O6 G A1007 66.037 -61.817 26.546 1.00 72.66 O
ATOM 20 N1 G A1007 66.563 -63.321 28.180 1.00 72.86 N
ATOM 21 C2 G A1007 66.692 -63.727 29.486 1.00 72.72 C
ATOM 22 N2 G A1007 67.152 -64.980 29.631 1.00 73.20 N
ATOM 23 N3 G A1007 66.410 -62.974 30.549 1.00 72.18 N
ATOM 24 C4 G A1007 65.972 -61.741 30.189 1.00 71.77 C
ATOM 25 P A A1008 66.941 -59.452 36.616 1.00 98.95 P
ATOM 26 OP1 A A1008 66.041 -58.676 37.506 1.00 98.43 O
ATOM 27 OP2 A A1008 68.179 -58.811 36.100 1.00 98.96 O
ATOM 28 O5' A A1008 67.297 -60.831 37.285 1.00 99.34 O
TER
ATOM 1 O3' A B1005 58.474 -57.228 33.614 1.00 48.08 O
ATOM 2 P A B1006 60.016 -56.797 33.785 1.00 47.13 P
ATOM 3 OP1 A B1006 60.744 -58.065 34.139 1.00 47.52 O
ATOM 4 OP2 A B1006 60.075 -55.644 34.728 1.00 46.58 O
ATOM 5 O5' A B1006 60.426 -56.324 32.319 1.00 47.31 O
ATOM 6 C5' A B1006 60.712 -57.280 31.325 1.00 47.85 C
ATOM 7 C4' A B1006 61.174 -56.641 30.057 1.00 47.96 C
ATOM 8 O4' A B1006 60.131 -55.820 29.511 1.00 47.75 O
ATOM 9 C3' A B1006 62.342 -55.702 30.181 1.00 47.73 C
ATOM 10 O3' A B1006 63.578 -56.383 30.276 1.00 48.03 O
ATOM 11 C2' A B1006 62.212 -54.872 28.923 1.00 47.75 C
ATOM 12 O2' A B1006 62.713 -55.599 27.814 1.00 48.28 O
ATOM 13 C1' A B1006 60.700 -54.768 28.779 1.00 47.64 C
ATOM 14 N9 A B1006 60.166 -53.492 29.282 1.00 47.09 N
ATOM 15 C8 A B1006 59.764 -53.134 30.538 1.00 46.67 C
ATOM 16 N7 A B1006 59.286 -51.910 30.610 1.00 46.27 N
ATOM 17 C5 A B1006 59.375 -51.437 29.319 1.00 46.43 C
ATOM 18 C6 A B1006 59.045 -50.209 28.723 1.00 46.20 C
ATOM 19 N6 A B1006 58.533 -49.172 29.378 1.00 45.73 N
ATOM 20 N1 A B1006 59.229 -50.057 27.401 1.00 46.48 N
ATOM 21 C2 A B1006 59.735 -51.094 26.735 1.00 46.97 C
ATOM 22 N3 A B1006 60.096 -52.289 27.188 1.00 47.23 N
ATOM 23 C4 A B1006 59.888 -52.400 28.500 1.00 46.93 C
ATOM 24 P G B1007 64.658 -55.936 31.354 1.00 69.45 P
ATOM 25 OP1 G B1007 64.031 -54.942 32.229 1.00 68.89 O
ATOM 26 OP2 G B1007 65.864 -55.562 30.616 1.00 69.60 O
ATOM 27 O5' G B1007 64.912 -57.261 32.164 1.00 69.72 O
TER
Atoms:
OP1: (64.031,-54.942,32.229)
OP2: (65.864,-55.562,30.616)
C3': (65.942,-59.020,34.233)
C1': (65.538,-60.561,32.476)
C5': (64.077,-57.622,33.243)
O6: (66.037,-61.817,26.546)
O4': (64.298,-59.979,32.822)
C8: (65.191,-59.681,30.188)
C2: (66.692,-63.727,29.486)
C6: (66.118,-62.072,27.766)
C5: (65.806,-61.250,28.897)
C4: (65.972,-61.741,30.189)
P: (64.658,-55.936,31.354)
C4': (64.488,-58.944,33.822)
C2': (66.609,-59.606,33.001)
O2': (67.843,-60.252,33.241)
N1: (66.563,-63.321,28.180)
N2: (67.152,-64.980,29.631)
N3: (66.410,-62.974,30.549)
N7: (65.312,-59.953,28.924)
N9: (65.566,-60.702,31.018)
O5': (64.912,-57.261,32.164)
O3': (66.084,-59.907,35.341)
OP2: (65.864,-55.562,30.616)
C3': (65.942,-59.020,34.233)
C1': (65.538,-60.561,32.476)
C5': (64.077,-57.622,33.243)
O6: (66.037,-61.817,26.546)
O4': (64.298,-59.979,32.822)
C8: (65.191,-59.681,30.188)
C2: (66.692,-63.727,29.486)
C6: (66.118,-62.072,27.766)
C5: (65.806,-61.250,28.897)
C4: (65.972,-61.741,30.189)
P: (64.658,-55.936,31.354)
C4': (64.488,-58.944,33.822)
C2': (66.609,-59.606,33.001)
O2': (67.843,-60.252,33.241)
N1: (66.563,-63.321,28.180)
N2: (67.152,-64.980,29.631)
N3: (66.410,-62.974,30.549)
N7: (65.312,-59.953,28.924)
N9: (65.566,-60.702,31.018)
O5': (64.912,-57.261,32.164)
O3': (66.084,-59.907,35.341)
OP1: (60.744,-58.065,34.139)
OP2: (60.075,-55.644,34.728)
C3': (62.342,-55.702,30.181)
C1': (60.700,-54.768,28.779)
C5': (60.712,-57.280,31.325)
O4': (60.131,-55.820,29.511)
C8: (59.764,-53.134,30.538)
O2': (62.713,-55.599,27.814)
C6: (59.045,-50.209,28.723)
C5: (59.375,-51.437,29.319)
C4: (59.888,-52.400,28.500)
P: (60.016,-56.797,33.785)
C4': (61.174,-56.641,30.057)
C2': (62.212,-54.872,28.923)
C2: (59.735,-51.094,26.735)
N1: (59.229,-50.057,27.401)
N3: (60.096,-52.289,27.188)
N6: (58.533,-49.172,29.378)
N7: (59.286,-51.910,30.610)
N9: (60.166,-53.492,29.282)
O5': (60.426,-56.324,32.319)
O3': (63.578,-56.383,30.276)
OP2: (60.075,-55.644,34.728)
C3': (62.342,-55.702,30.181)
C1': (60.700,-54.768,28.779)
C5': (60.712,-57.280,31.325)
O4': (60.131,-55.820,29.511)
C8: (59.764,-53.134,30.538)
O2': (62.713,-55.599,27.814)
C6: (59.045,-50.209,28.723)
C5: (59.375,-51.437,29.319)
C4: (59.888,-52.400,28.500)
P: (60.016,-56.797,33.785)
C4': (61.174,-56.641,30.057)
C2': (62.212,-54.872,28.923)
C2: (59.735,-51.094,26.735)
N1: (59.229,-50.057,27.401)
N3: (60.096,-52.289,27.188)
N6: (58.533,-49.172,29.378)
N7: (59.286,-51.910,30.610)
N9: (60.166,-53.492,29.282)
O5': (60.426,-56.324,32.319)
O3': (63.578,-56.383,30.276)
Image (generated by PyMOL):