ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1967:A1966

Extra

PDB:
ATOM 1 O3' A A1966 -77.188 -14.741 8.363 1.00 39.98 O
ATOM 2 P G A1967 -77.086 -14.988 6.769 1.00 43.13 P
ATOM 3 OP1 G A1967 -78.116 -16.004 6.414 1.00 42.82 O
ATOM 4 OP2 G A1967 -75.641 -15.229 6.446 1.00 39.38 O
ATOM 5 O5' G A1967 -77.567 -13.586 6.147 1.00 35.19 O
ATOM 6 C5' G A1967 -78.941 -13.259 6.171 1.00 38.12 C
ATOM 7 C4' G A1967 -79.246 -12.162 5.180 1.00 40.98 C
ATOM 8 O4' G A1967 -78.907 -10.886 5.778 1.00 45.90 O
ATOM 9 C3' G A1967 -78.462 -12.258 3.880 1.00 41.72 C
ATOM 10 O3' G A1967 -79.265 -12.838 2.892 1.00 36.91 O
ATOM 11 C2' G A1967 -78.248 -10.808 3.495 1.00 47.63 C
ATOM 12 O2' G A1967 -79.367 -10.331 2.785 1.00 45.53 O
ATOM 13 C1' G A1967 -78.153 -10.126 4.853 1.00 54.74 C
ATOM 14 N9 G A1967 -76.787 -10.065 5.339 1.00 56.17 N
ATOM 15 C8 G A1967 -76.174 -10.937 6.201 1.00 59.17 C
ATOM 16 N7 G A1967 -74.933 -10.628 6.464 1.00 58.98 N
ATOM 17 C5 G A1967 -74.714 -9.474 5.724 1.00 58.46 C
ATOM 18 C6 G A1967 -73.555 -8.673 5.605 1.00 63.11 C
ATOM 19 O6 G A1967 -72.455 -8.838 6.149 1.00 72.59 O
ATOM 20 N1 G A1967 -73.758 -7.592 4.751 1.00 58.92 N
ATOM 21 C2 G A1967 -74.931 -7.323 4.096 1.00 53.26 C
ATOM 22 N2 G A1967 -74.941 -6.243 3.315 1.00 47.15 N
ATOM 23 N3 G A1967 -76.027 -8.063 4.196 1.00 61.80 N
ATOM 24 C4 G A1967 -75.845 -9.118 5.025 1.00 59.38 C
ATOM 25 P C A1968 -78.591 -13.901 1.903 1.00 49.62 P
ATOM 26 OP1 C A1968 -79.671 -14.666 1.215 1.00 57.49 O
ATOM 27 OP2 C A1968 -77.620 -14.635 2.748 1.00 58.29 O
ATOM 28 O5' C A1968 -77.788 -13.014 0.823 1.00 45.93 O
TER

ATOM 1 O3' A B1965 -75.164 -18.193 12.522 1.00 30.60 O
ATOM 2 P A B1966 -75.291 -18.349 10.949 1.00 37.81 P
ATOM 3 OP1 A B1966 -76.247 -19.456 10.740 1.00 42.13 O
ATOM 4 OP2 A B1966 -73.961 -18.388 10.290 1.00 36.91 O
ATOM 5 O5' A B1966 -75.996 -16.957 10.576 1.00 35.20 O
ATOM 6 C5' A B1966 -75.309 -15.714 10.828 1.00 34.43 C
ATOM 7 C4' A B1966 -76.117 -14.465 10.502 1.00 29.24 C
ATOM 8 O4' A B1966 -75.502 -13.320 11.141 1.00 39.58 O
ATOM 9 C3' A B1966 -76.141 -14.073 9.040 1.00 34.95 C
ATOM 10 O3' A B1966 -77.188 -14.741 8.363 1.00 39.98 O
ATOM 11 C2' A B1966 -76.473 -12.593 9.117 1.00 41.00 C
ATOM 12 O2' A B1966 -77.866 -12.393 9.208 1.00 47.62 O
ATOM 13 C1' A B1966 -75.797 -12.150 10.406 1.00 37.56 C
ATOM 14 N9 A B1966 -74.564 -11.413 10.161 1.00 34.12 N
ATOM 15 C8 A B1966 -73.296 -11.858 10.367 1.00 42.09 C
ATOM 16 N7 A B1966 -72.376 -10.984 10.055 1.00 52.55 N
ATOM 17 C5 A B1966 -73.095 -9.886 9.614 1.00 51.72 C
ATOM 18 C6 A B1966 -72.703 -8.620 9.142 1.00 56.14 C
ATOM 19 N6 A B1966 -71.421 -8.264 9.043 1.00 65.95 N
ATOM 20 N1 A B1966 -73.657 -7.746 8.773 1.00 47.43 N
ATOM 21 C2 A B1966 -74.924 -8.126 8.879 1.00 51.78 C
ATOM 22 N3 A B1966 -75.412 -9.289 9.313 1.00 58.58 N
ATOM 23 C4 A B1966 -74.440 -10.136 9.669 1.00 41.84 C
ATOM 24 P G B1967 -77.086 -14.988 6.769 1.00 43.13 P
ATOM 25 OP1 G B1967 -78.116 -16.004 6.414 1.00 42.82 O
ATOM 26 OP2 G B1967 -75.641 -15.229 6.446 1.00 39.38 O
ATOM 27 O5' G B1967 -77.567 -13.586 6.147 1.00 35.19 O
TER

Atoms:
OP1: (-78.116,-16.004,6.414)
OP2: (-75.641,-15.229,6.446)
C3': (-78.462,-12.258,3.880)
C1': (-78.153,-10.126,4.853)
C5': (-78.941,-13.259,6.171)
O6: (-72.455,-8.838,6.149)
O4': (-78.907,-10.886,5.778)
C8: (-76.174,-10.937,6.201)
C2: (-74.931,-7.323,4.096)
C6: (-73.555,-8.673,5.605)
C5: (-74.714,-9.474,5.724)
C4: (-75.845,-9.118,5.025)
P: (-77.086,-14.988,6.769)
C4': (-79.246,-12.162,5.180)
C2': (-78.248,-10.808,3.495)
O2': (-79.367,-10.331,2.785)
N1: (-73.758,-7.592,4.751)
N2: (-74.941,-6.243,3.315)
N3: (-76.027,-8.063,4.196)
N7: (-74.933,-10.628,6.464)
N9: (-76.787,-10.065,5.339)
O5': (-77.567,-13.586,6.147)
O3': (-79.265,-12.838,2.892)
OP1: (-76.247,-19.456,10.740)
OP2: (-73.961,-18.388,10.290)
C3': (-76.141,-14.073,9.040)
C1': (-75.797,-12.150,10.406)
C5': (-75.309,-15.714,10.828)
O4': (-75.502,-13.320,11.141)
C8: (-73.296,-11.858,10.367)
O2': (-77.866,-12.393,9.208)
C6: (-72.703,-8.620,9.142)
C5: (-73.095,-9.886,9.614)
C4: (-74.440,-10.136,9.669)
P: (-75.291,-18.349,10.949)
C4': (-76.117,-14.465,10.502)
C2': (-76.473,-12.593,9.117)
C2: (-74.924,-8.126,8.879)
N1: (-73.657,-7.746,8.773)
N3: (-75.412,-9.289,9.313)
N6: (-71.421,-8.264,9.043)
N7: (-72.376,-10.984,10.055)
N9: (-74.564,-11.413,10.161)
O5': (-75.996,-16.957,10.576)
O3': (-77.188,-14.741,8.363)
Image (generated by PyMOL):
PyMOL image
show in jmol