Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 2 P G A 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 3 OP1 G A 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 4 OP2 G A 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 5 O5' G A 42 0.854 50.900 7.053 1.00 24.04 O
ATOM 6 C5' G A 42 0.975 50.972 8.466 1.00 24.90 C
ATOM 7 C4' G A 42 1.097 49.571 9.046 1.00 25.56 C
ATOM 8 O4' G A 42 -0.087 48.816 8.688 1.00 25.75 O
ATOM 9 C3' G A 42 2.290 48.749 8.565 1.00 25.88 C
ATOM 10 O3' G A 42 2.830 47.982 9.640 1.00 26.68 O
ATOM 11 C2' G A 42 1.705 47.848 7.481 1.00 25.78 C
ATOM 12 O2' G A 42 2.324 46.579 7.425 1.00 25.99 O
ATOM 13 C1' G A 42 0.250 47.687 7.909 1.00 25.78 C
ATOM 14 N9 G A 42 -0.627 47.592 6.743 1.00 25.77 N
ATOM 15 C8 G A 42 -1.251 48.608 6.062 1.00 25.76 C
ATOM 16 N7 G A 42 -1.959 48.203 5.042 1.00 25.90 N
ATOM 17 C5 G A 42 -1.791 46.824 5.042 1.00 25.79 C
ATOM 18 C6 G A 42 -2.313 45.830 4.171 1.00 25.70 C
ATOM 19 O6 G A 42 -3.053 45.978 3.188 1.00 25.38 O
ATOM 20 N1 G A 42 -1.885 44.550 4.531 1.00 25.64 N
ATOM 21 C2 G A 42 -1.065 44.271 5.602 1.00 25.67 C
ATOM 22 N2 G A 42 -0.744 42.988 5.808 1.00 25.91 N
ATOM 23 N3 G A 42 -0.565 45.189 6.419 1.00 25.11 N
ATOM 24 C4 G A 42 -0.973 46.438 6.084 1.00 25.53 C
ATOM 25 P G A 43 4.402 48.008 9.930 1.00 27.20 P
ATOM 26 OP1 G A 43 4.743 46.854 10.782 1.00 26.55 O
ATOM 27 OP2 G A 43 4.744 49.379 10.376 1.00 28.14 O
ATOM 28 O5' G A 43 5.039 47.756 8.483 1.00 27.43 O
TER
ATOM 1 O3' C B 40 -3.589 55.543 1.780 1.00 31.07 O
ATOM 2 P A B 41 -3.577 54.112 2.483 1.00 29.89 P
ATOM 3 OP1 A B 41 -2.256 53.496 2.220 1.00 30.27 O
ATOM 4 OP2 A B 41 -4.816 53.387 2.112 1.00 29.73 O
ATOM 5 O5' A B 41 -3.705 54.529 4.024 1.00 28.32 O
ATOM 6 C5' A B 41 -2.559 54.816 4.812 1.00 25.63 C
ATOM 7 C4' A B 41 -2.576 53.925 6.037 1.00 24.03 C
ATOM 8 O4' A B 41 -3.852 54.054 6.719 1.00 23.21 O
ATOM 9 C3' A B 41 -2.410 52.435 5.743 1.00 23.32 C
ATOM 10 O3' A B 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 11 C2' A B 41 -3.795 51.861 6.036 1.00 22.61 C
ATOM 12 O2' A B 41 -3.766 50.522 6.472 1.00 22.56 O
ATOM 13 C1' A B 41 -4.246 52.775 7.166 1.00 21.77 C
ATOM 14 N9 A B 41 -5.685 52.763 7.436 1.00 21.32 N
ATOM 15 C8 A B 41 -6.702 52.784 6.518 1.00 21.08 C
ATOM 16 N7 A B 41 -7.901 52.765 7.049 1.00 20.82 N
ATOM 17 C5 A B 41 -7.657 52.731 8.412 1.00 20.75 C
ATOM 18 C6 A B 41 -8.516 52.699 9.532 1.00 20.89 C
ATOM 19 N6 A B 41 -9.847 52.699 9.425 1.00 21.11 N
ATOM 20 N1 A B 41 -7.960 52.672 10.765 1.00 20.57 N
ATOM 21 C2 A B 41 -6.626 52.678 10.862 1.00 20.25 C
ATOM 22 N3 A B 41 -5.718 52.706 9.883 1.00 20.52 N
ATOM 23 C4 A B 41 -6.299 52.732 8.670 1.00 20.67 C
ATOM 24 P G B 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 25 OP1 G B 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 26 OP2 G B 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 27 O5' G B 42 0.854 50.900 7.053 1.00 24.04 O
TER
ATOM 2 P G A 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 3 OP1 G A 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 4 OP2 G A 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 5 O5' G A 42 0.854 50.900 7.053 1.00 24.04 O
ATOM 6 C5' G A 42 0.975 50.972 8.466 1.00 24.90 C
ATOM 7 C4' G A 42 1.097 49.571 9.046 1.00 25.56 C
ATOM 8 O4' G A 42 -0.087 48.816 8.688 1.00 25.75 O
ATOM 9 C3' G A 42 2.290 48.749 8.565 1.00 25.88 C
ATOM 10 O3' G A 42 2.830 47.982 9.640 1.00 26.68 O
ATOM 11 C2' G A 42 1.705 47.848 7.481 1.00 25.78 C
ATOM 12 O2' G A 42 2.324 46.579 7.425 1.00 25.99 O
ATOM 13 C1' G A 42 0.250 47.687 7.909 1.00 25.78 C
ATOM 14 N9 G A 42 -0.627 47.592 6.743 1.00 25.77 N
ATOM 15 C8 G A 42 -1.251 48.608 6.062 1.00 25.76 C
ATOM 16 N7 G A 42 -1.959 48.203 5.042 1.00 25.90 N
ATOM 17 C5 G A 42 -1.791 46.824 5.042 1.00 25.79 C
ATOM 18 C6 G A 42 -2.313 45.830 4.171 1.00 25.70 C
ATOM 19 O6 G A 42 -3.053 45.978 3.188 1.00 25.38 O
ATOM 20 N1 G A 42 -1.885 44.550 4.531 1.00 25.64 N
ATOM 21 C2 G A 42 -1.065 44.271 5.602 1.00 25.67 C
ATOM 22 N2 G A 42 -0.744 42.988 5.808 1.00 25.91 N
ATOM 23 N3 G A 42 -0.565 45.189 6.419 1.00 25.11 N
ATOM 24 C4 G A 42 -0.973 46.438 6.084 1.00 25.53 C
ATOM 25 P G A 43 4.402 48.008 9.930 1.00 27.20 P
ATOM 26 OP1 G A 43 4.743 46.854 10.782 1.00 26.55 O
ATOM 27 OP2 G A 43 4.744 49.379 10.376 1.00 28.14 O
ATOM 28 O5' G A 43 5.039 47.756 8.483 1.00 27.43 O
TER
ATOM 1 O3' C B 40 -3.589 55.543 1.780 1.00 31.07 O
ATOM 2 P A B 41 -3.577 54.112 2.483 1.00 29.89 P
ATOM 3 OP1 A B 41 -2.256 53.496 2.220 1.00 30.27 O
ATOM 4 OP2 A B 41 -4.816 53.387 2.112 1.00 29.73 O
ATOM 5 O5' A B 41 -3.705 54.529 4.024 1.00 28.32 O
ATOM 6 C5' A B 41 -2.559 54.816 4.812 1.00 25.63 C
ATOM 7 C4' A B 41 -2.576 53.925 6.037 1.00 24.03 C
ATOM 8 O4' A B 41 -3.852 54.054 6.719 1.00 23.21 O
ATOM 9 C3' A B 41 -2.410 52.435 5.743 1.00 23.32 C
ATOM 10 O3' A B 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 11 C2' A B 41 -3.795 51.861 6.036 1.00 22.61 C
ATOM 12 O2' A B 41 -3.766 50.522 6.472 1.00 22.56 O
ATOM 13 C1' A B 41 -4.246 52.775 7.166 1.00 21.77 C
ATOM 14 N9 A B 41 -5.685 52.763 7.436 1.00 21.32 N
ATOM 15 C8 A B 41 -6.702 52.784 6.518 1.00 21.08 C
ATOM 16 N7 A B 41 -7.901 52.765 7.049 1.00 20.82 N
ATOM 17 C5 A B 41 -7.657 52.731 8.412 1.00 20.75 C
ATOM 18 C6 A B 41 -8.516 52.699 9.532 1.00 20.89 C
ATOM 19 N6 A B 41 -9.847 52.699 9.425 1.00 21.11 N
ATOM 20 N1 A B 41 -7.960 52.672 10.765 1.00 20.57 N
ATOM 21 C2 A B 41 -6.626 52.678 10.862 1.00 20.25 C
ATOM 22 N3 A B 41 -5.718 52.706 9.883 1.00 20.52 N
ATOM 23 C4 A B 41 -6.299 52.732 8.670 1.00 20.67 C
ATOM 24 P G B 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 25 OP1 G B 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 26 OP2 G B 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 27 O5' G B 42 0.854 50.900 7.053 1.00 24.04 O
TER
Atoms:
OP1: (0.598,53.368,6.730)
OP2: (0.298,51.729,4.778)
C3': (2.290,48.749,8.565)
C1': (0.250,47.687,7.909)
C5': (0.975,50.972,8.466)
O6: (-3.053,45.978,3.188)
O4': (-0.087,48.816,8.688)
C8: (-1.251,48.608,6.062)
C2: (-1.065,44.271,5.602)
C6: (-2.313,45.830,4.171)
C5: (-1.791,46.824,5.042)
C4: (-0.973,46.438,6.084)
P: (0.143,52.056,6.213)
C4': (1.097,49.571,9.046)
C2': (1.705,47.848,7.481)
O2': (2.324,46.579,7.425)
N1: (-1.885,44.550,4.531)
N2: (-0.744,42.988,5.808)
N3: (-0.565,45.189,6.419)
N7: (-1.959,48.203,5.042)
N9: (-0.627,47.592,6.743)
O5': (0.854,50.900,7.053)
O3': (2.830,47.982,9.640)
OP2: (0.298,51.729,4.778)
C3': (2.290,48.749,8.565)
C1': (0.250,47.687,7.909)
C5': (0.975,50.972,8.466)
O6: (-3.053,45.978,3.188)
O4': (-0.087,48.816,8.688)
C8: (-1.251,48.608,6.062)
C2: (-1.065,44.271,5.602)
C6: (-2.313,45.830,4.171)
C5: (-1.791,46.824,5.042)
C4: (-0.973,46.438,6.084)
P: (0.143,52.056,6.213)
C4': (1.097,49.571,9.046)
C2': (1.705,47.848,7.481)
O2': (2.324,46.579,7.425)
N1: (-1.885,44.550,4.531)
N2: (-0.744,42.988,5.808)
N3: (-0.565,45.189,6.419)
N7: (-1.959,48.203,5.042)
N9: (-0.627,47.592,6.743)
O5': (0.854,50.900,7.053)
O3': (2.830,47.982,9.640)
OP1: (-2.256,53.496,2.220)
OP2: (-4.816,53.387,2.112)
C3': (-2.410,52.435,5.743)
C1': (-4.246,52.775,7.166)
C5': (-2.559,54.816,4.812)
O4': (-3.852,54.054,6.719)
C8: (-6.702,52.784,6.518)
O2': (-3.766,50.522,6.472)
C6: (-8.516,52.699,9.532)
C5: (-7.657,52.731,8.412)
C4: (-6.299,52.732,8.670)
P: (-3.577,54.112,2.483)
C4': (-2.576,53.925,6.037)
C2': (-3.795,51.861,6.036)
C2: (-6.626,52.678,10.862)
N1: (-7.960,52.672,10.765)
N3: (-5.718,52.706,9.883)
N6: (-9.847,52.699,9.425)
N7: (-7.901,52.765,7.049)
N9: (-5.685,52.763,7.436)
O5': (-3.705,54.529,4.024)
O3': (-1.403,51.883,6.588)
OP2: (-4.816,53.387,2.112)
C3': (-2.410,52.435,5.743)
C1': (-4.246,52.775,7.166)
C5': (-2.559,54.816,4.812)
O4': (-3.852,54.054,6.719)
C8: (-6.702,52.784,6.518)
O2': (-3.766,50.522,6.472)
C6: (-8.516,52.699,9.532)
C5: (-7.657,52.731,8.412)
C4: (-6.299,52.732,8.670)
P: (-3.577,54.112,2.483)
C4': (-2.576,53.925,6.037)
C2': (-3.795,51.861,6.036)
C2: (-6.626,52.678,10.862)
N1: (-7.960,52.672,10.765)
N3: (-5.718,52.706,9.883)
N6: (-9.847,52.699,9.425)
N7: (-7.901,52.765,7.049)
N9: (-5.685,52.763,7.436)
O5': (-3.705,54.529,4.024)
O3': (-1.403,51.883,6.588)
Image (generated by PyMOL):