Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2540:A2539
Extra
PDB:
ATOM 1 O3' A A2539 -100.665 -37.000 -57.734 1.00106.41 O
ATOM 2 P G A2540 -99.143 -36.727 -57.281 1.00 95.37 P
ATOM 3 OP1 G A2540 -99.008 -35.292 -56.941 1.00108.65 O
ATOM 4 OP2 G A2540 -98.245 -37.324 -58.305 1.00108.81 O
ATOM 5 O5' G A2540 -98.982 -37.566 -55.939 1.00 66.68 O
ATOM 6 C5' G A2540 -98.748 -38.987 -55.969 1.00 66.68 C
ATOM 7 C4' G A2540 -99.790 -39.706 -55.140 1.00 66.68 C
ATOM 8 O4' G A2540 -101.088 -39.549 -55.767 1.00 66.68 O
ATOM 9 C3' G A2540 -99.579 -41.206 -55.038 1.00 66.68 C
ATOM 10 O3' G A2540 -98.745 -41.514 -53.932 1.00 66.68 O
ATOM 11 C2' G A2540 -100.988 -41.750 -54.851 1.00 66.68 C
ATOM 12 O2' G A2540 -101.401 -41.740 -53.499 1.00 66.68 O
ATOM 13 C1' G A2540 -101.817 -40.761 -55.679 1.00 66.68 C
ATOM 14 N9 G A2540 -102.085 -41.227 -57.039 1.00 72.23 N
ATOM 15 C8 G A2540 -101.520 -40.758 -58.199 1.00 72.07 C
ATOM 16 N7 G A2540 -101.943 -41.379 -59.262 1.00 72.00 N
ATOM 17 C5 G A2540 -102.844 -42.312 -58.779 1.00 71.96 C
ATOM 18 C6 G A2540 -103.615 -43.274 -59.467 1.00 72.07 C
ATOM 19 O6 G A2540 -103.659 -43.497 -60.681 1.00 72.08 O
ATOM 20 N1 G A2540 -104.398 -44.022 -58.593 1.00 72.08 N
ATOM 21 C2 G A2540 -104.435 -43.861 -57.229 1.00 72.02 C
ATOM 22 N2 G A2540 -105.259 -44.677 -56.553 1.00 72.06 N
ATOM 23 N3 G A2540 -103.716 -42.963 -56.575 1.00 71.86 N
ATOM 24 C4 G A2540 -102.948 -42.229 -57.408 1.00 71.94 C
ATOM 25 P G A2541 -97.683 -42.703 -54.058 1.00 45.10 P
ATOM 26 OP1 G A2541 -97.195 -43.002 -52.688 1.00130.29 O
ATOM 27 OP2 G A2541 -96.708 -42.373 -55.128 1.00130.24 O
ATOM 28 O5' G A2541 -98.575 -43.931 -54.550 1.00 48.29 O
TER
ATOM 1 O3' G B2538 -107.065 -37.965 -56.018 1.00167.43 O
ATOM 2 P A B2539 -106.093 -39.176 -55.557 1.00104.94 P
ATOM 3 OP1 A B2539 -106.639 -40.480 -56.002 1.00 96.09 O
ATOM 4 OP2 A B2539 -105.817 -38.964 -54.117 1.00 96.01 O
ATOM 5 O5' A B2539 -104.737 -38.957 -56.356 1.00106.41 O
ATOM 6 C5' A B2539 -103.717 -38.054 -55.895 1.00106.41 C
ATOM 7 C4' A B2539 -102.884 -37.639 -57.070 1.00106.41 C
ATOM 8 O4' A B2539 -103.797 -37.092 -58.052 1.00106.41 O
ATOM 9 C3' A B2539 -101.756 -36.620 -56.881 1.00106.41 C
ATOM 10 O3' A B2539 -100.665 -37.000 -57.734 1.00106.41 O
ATOM 11 C2' A B2539 -102.374 -35.332 -57.420 1.00106.41 C
ATOM 12 O2' A B2539 -101.425 -34.422 -57.931 1.00106.41 O
ATOM 13 C1' A B2539 -103.283 -35.877 -58.524 1.00106.41 C
ATOM 14 N9 A B2539 -102.887 -36.025 -59.921 1.00109.30 N
ATOM 15 C8 A B2539 -101.838 -36.760 -60.420 1.00109.38 C
ATOM 16 N7 A B2539 -101.752 -36.740 -61.724 1.00109.48 N
ATOM 17 C5 A B2539 -102.807 -35.929 -62.113 1.00109.42 C
ATOM 18 C6 A B2539 -103.253 -35.502 -63.371 1.00109.42 C
ATOM 19 N6 A B2539 -102.669 -35.854 -64.519 1.00109.38 N
ATOM 20 N1 A B2539 -104.332 -34.690 -63.413 1.00109.42 N
ATOM 21 C2 A B2539 -104.916 -34.339 -62.260 1.00109.40 C
ATOM 22 N3 A B2539 -104.591 -34.677 -61.017 1.00109.33 N
ATOM 23 C4 A B2539 -103.513 -35.480 -61.012 1.00109.35 C
ATOM 24 P G B2540 -99.143 -36.727 -57.281 1.00 95.37 P
ATOM 25 OP1 G B2540 -99.008 -35.292 -56.941 1.00108.65 O
ATOM 26 OP2 G B2540 -98.245 -37.324 -58.305 1.00108.81 O
ATOM 27 O5' G B2540 -98.982 -37.566 -55.939 1.00 66.68 O
TER
ATOM 2 P G A2540 -99.143 -36.727 -57.281 1.00 95.37 P
ATOM 3 OP1 G A2540 -99.008 -35.292 -56.941 1.00108.65 O
ATOM 4 OP2 G A2540 -98.245 -37.324 -58.305 1.00108.81 O
ATOM 5 O5' G A2540 -98.982 -37.566 -55.939 1.00 66.68 O
ATOM 6 C5' G A2540 -98.748 -38.987 -55.969 1.00 66.68 C
ATOM 7 C4' G A2540 -99.790 -39.706 -55.140 1.00 66.68 C
ATOM 8 O4' G A2540 -101.088 -39.549 -55.767 1.00 66.68 O
ATOM 9 C3' G A2540 -99.579 -41.206 -55.038 1.00 66.68 C
ATOM 10 O3' G A2540 -98.745 -41.514 -53.932 1.00 66.68 O
ATOM 11 C2' G A2540 -100.988 -41.750 -54.851 1.00 66.68 C
ATOM 12 O2' G A2540 -101.401 -41.740 -53.499 1.00 66.68 O
ATOM 13 C1' G A2540 -101.817 -40.761 -55.679 1.00 66.68 C
ATOM 14 N9 G A2540 -102.085 -41.227 -57.039 1.00 72.23 N
ATOM 15 C8 G A2540 -101.520 -40.758 -58.199 1.00 72.07 C
ATOM 16 N7 G A2540 -101.943 -41.379 -59.262 1.00 72.00 N
ATOM 17 C5 G A2540 -102.844 -42.312 -58.779 1.00 71.96 C
ATOM 18 C6 G A2540 -103.615 -43.274 -59.467 1.00 72.07 C
ATOM 19 O6 G A2540 -103.659 -43.497 -60.681 1.00 72.08 O
ATOM 20 N1 G A2540 -104.398 -44.022 -58.593 1.00 72.08 N
ATOM 21 C2 G A2540 -104.435 -43.861 -57.229 1.00 72.02 C
ATOM 22 N2 G A2540 -105.259 -44.677 -56.553 1.00 72.06 N
ATOM 23 N3 G A2540 -103.716 -42.963 -56.575 1.00 71.86 N
ATOM 24 C4 G A2540 -102.948 -42.229 -57.408 1.00 71.94 C
ATOM 25 P G A2541 -97.683 -42.703 -54.058 1.00 45.10 P
ATOM 26 OP1 G A2541 -97.195 -43.002 -52.688 1.00130.29 O
ATOM 27 OP2 G A2541 -96.708 -42.373 -55.128 1.00130.24 O
ATOM 28 O5' G A2541 -98.575 -43.931 -54.550 1.00 48.29 O
TER
ATOM 1 O3' G B2538 -107.065 -37.965 -56.018 1.00167.43 O
ATOM 2 P A B2539 -106.093 -39.176 -55.557 1.00104.94 P
ATOM 3 OP1 A B2539 -106.639 -40.480 -56.002 1.00 96.09 O
ATOM 4 OP2 A B2539 -105.817 -38.964 -54.117 1.00 96.01 O
ATOM 5 O5' A B2539 -104.737 -38.957 -56.356 1.00106.41 O
ATOM 6 C5' A B2539 -103.717 -38.054 -55.895 1.00106.41 C
ATOM 7 C4' A B2539 -102.884 -37.639 -57.070 1.00106.41 C
ATOM 8 O4' A B2539 -103.797 -37.092 -58.052 1.00106.41 O
ATOM 9 C3' A B2539 -101.756 -36.620 -56.881 1.00106.41 C
ATOM 10 O3' A B2539 -100.665 -37.000 -57.734 1.00106.41 O
ATOM 11 C2' A B2539 -102.374 -35.332 -57.420 1.00106.41 C
ATOM 12 O2' A B2539 -101.425 -34.422 -57.931 1.00106.41 O
ATOM 13 C1' A B2539 -103.283 -35.877 -58.524 1.00106.41 C
ATOM 14 N9 A B2539 -102.887 -36.025 -59.921 1.00109.30 N
ATOM 15 C8 A B2539 -101.838 -36.760 -60.420 1.00109.38 C
ATOM 16 N7 A B2539 -101.752 -36.740 -61.724 1.00109.48 N
ATOM 17 C5 A B2539 -102.807 -35.929 -62.113 1.00109.42 C
ATOM 18 C6 A B2539 -103.253 -35.502 -63.371 1.00109.42 C
ATOM 19 N6 A B2539 -102.669 -35.854 -64.519 1.00109.38 N
ATOM 20 N1 A B2539 -104.332 -34.690 -63.413 1.00109.42 N
ATOM 21 C2 A B2539 -104.916 -34.339 -62.260 1.00109.40 C
ATOM 22 N3 A B2539 -104.591 -34.677 -61.017 1.00109.33 N
ATOM 23 C4 A B2539 -103.513 -35.480 -61.012 1.00109.35 C
ATOM 24 P G B2540 -99.143 -36.727 -57.281 1.00 95.37 P
ATOM 25 OP1 G B2540 -99.008 -35.292 -56.941 1.00108.65 O
ATOM 26 OP2 G B2540 -98.245 -37.324 -58.305 1.00108.81 O
ATOM 27 O5' G B2540 -98.982 -37.566 -55.939 1.00 66.68 O
TER
Atoms:
OP1: (-99.008,-35.292,-56.941)
OP2: (-98.245,-37.324,-58.305)
C3': (-99.579,-41.206,-55.038)
C1': (-101.817,-40.761,-55.679)
C5': (-98.748,-38.987,-55.969)
O6: (-103.659,-43.497,-60.681)
O4': (-101.088,-39.549,-55.767)
C8: (-101.520,-40.758,-58.199)
C2: (-104.435,-43.861,-57.229)
C6: (-103.615,-43.274,-59.467)
C5: (-102.844,-42.312,-58.779)
C4: (-102.948,-42.229,-57.408)
P: (-99.143,-36.727,-57.281)
C4': (-99.790,-39.706,-55.140)
C2': (-100.988,-41.750,-54.851)
O2': (-101.401,-41.740,-53.499)
N1: (-104.398,-44.022,-58.593)
N2: (-105.259,-44.677,-56.553)
N3: (-103.716,-42.963,-56.575)
N7: (-101.943,-41.379,-59.262)
N9: (-102.085,-41.227,-57.039)
O5': (-98.982,-37.566,-55.939)
O3': (-98.745,-41.514,-53.932)
OP2: (-98.245,-37.324,-58.305)
C3': (-99.579,-41.206,-55.038)
C1': (-101.817,-40.761,-55.679)
C5': (-98.748,-38.987,-55.969)
O6: (-103.659,-43.497,-60.681)
O4': (-101.088,-39.549,-55.767)
C8: (-101.520,-40.758,-58.199)
C2: (-104.435,-43.861,-57.229)
C6: (-103.615,-43.274,-59.467)
C5: (-102.844,-42.312,-58.779)
C4: (-102.948,-42.229,-57.408)
P: (-99.143,-36.727,-57.281)
C4': (-99.790,-39.706,-55.140)
C2': (-100.988,-41.750,-54.851)
O2': (-101.401,-41.740,-53.499)
N1: (-104.398,-44.022,-58.593)
N2: (-105.259,-44.677,-56.553)
N3: (-103.716,-42.963,-56.575)
N7: (-101.943,-41.379,-59.262)
N9: (-102.085,-41.227,-57.039)
O5': (-98.982,-37.566,-55.939)
O3': (-98.745,-41.514,-53.932)
OP1: (-106.639,-40.480,-56.002)
OP2: (-105.817,-38.964,-54.117)
C3': (-101.756,-36.620,-56.881)
C1': (-103.283,-35.877,-58.524)
C5': (-103.717,-38.054,-55.895)
O4': (-103.797,-37.092,-58.052)
C8: (-101.838,-36.760,-60.420)
O2': (-101.425,-34.422,-57.931)
C6: (-103.253,-35.502,-63.371)
C5: (-102.807,-35.929,-62.113)
C4: (-103.513,-35.480,-61.012)
P: (-106.093,-39.176,-55.557)
C4': (-102.884,-37.639,-57.070)
C2': (-102.374,-35.332,-57.420)
C2: (-104.916,-34.339,-62.260)
N1: (-104.332,-34.690,-63.413)
N3: (-104.591,-34.677,-61.017)
N6: (-102.669,-35.854,-64.519)
N7: (-101.752,-36.740,-61.724)
N9: (-102.887,-36.025,-59.921)
O5': (-104.737,-38.957,-56.356)
O3': (-100.665,-37.000,-57.734)
OP2: (-105.817,-38.964,-54.117)
C3': (-101.756,-36.620,-56.881)
C1': (-103.283,-35.877,-58.524)
C5': (-103.717,-38.054,-55.895)
O4': (-103.797,-37.092,-58.052)
C8: (-101.838,-36.760,-60.420)
O2': (-101.425,-34.422,-57.931)
C6: (-103.253,-35.502,-63.371)
C5: (-102.807,-35.929,-62.113)
C4: (-103.513,-35.480,-61.012)
P: (-106.093,-39.176,-55.557)
C4': (-102.884,-37.639,-57.070)
C2': (-102.374,-35.332,-57.420)
C2: (-104.916,-34.339,-62.260)
N1: (-104.332,-34.690,-63.413)
N3: (-104.591,-34.677,-61.017)
N6: (-102.669,-35.854,-64.519)
N7: (-101.752,-36.740,-61.724)
N9: (-102.887,-36.025,-59.921)
O5': (-104.737,-38.957,-56.356)
O3': (-100.665,-37.000,-57.734)
Image (generated by PyMOL):