Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:99:98
Extra
PDB:
ATOM 1 O3' C A 8 51.487 41.937 98.747 1.00 53.17 O
ATOM 2 P C A 9 52.791 42.881 98.661 1.00 53.77 P
ATOM 3 OP1 C A 9 52.321 44.184 99.183 1.00 54.03 O
ATOM 4 OP2 C A 9 53.350 42.792 97.293 1.00 53.93 O
ATOM 5 O5' C A 9 53.874 42.261 99.662 1.00 51.72 O
ATOM 6 C5' C A 9 53.602 42.134 101.070 1.00 50.09 C
ATOM 7 C4' C A 9 54.602 41.201 101.737 1.00 50.32 C
ATOM 8 O4' C A 9 54.707 39.962 100.974 1.00 49.40 O
ATOM 9 C3' C A 9 56.034 41.696 101.929 1.00 49.41 C
ATOM 10 O3' C A 9 56.536 41.173 103.155 1.00 52.57 O
ATOM 11 C2' C A 9 56.773 41.040 100.770 1.00 48.48 C
ATOM 12 O2' C A 9 58.144 40.844 101.029 1.00 47.73 O
ATOM 13 C1' C A 9 56.064 39.694 100.686 1.00 47.54 C
ATOM 14 N1 C A 9 56.145 39.057 99.362 1.00 45.90 N
ATOM 15 C2 C A 9 56.853 37.849 99.225 1.00 46.20 C
ATOM 16 O2 C A 9 57.419 37.355 100.214 1.00 44.77 O
ATOM 17 N3 C A 9 56.911 37.257 98.013 1.00 46.59 N
ATOM 18 C4 C A 9 56.314 37.825 96.961 1.00 46.84 C
ATOM 19 N4 C A 9 56.402 37.203 95.781 1.00 49.15 N
ATOM 20 C5 C A 9 55.602 39.051 97.070 1.00 46.75 C
ATOM 21 C6 C A 9 55.541 39.627 98.276 1.00 46.29 C
ATOM 22 P A A 10 56.784 42.156 104.407 1.00 55.12 P
ATOM 23 OP1 A A 10 55.596 43.036 104.577 1.00 54.42 O
ATOM 24 OP2 A A 10 58.125 42.752 104.233 1.00 56.23 O
ATOM 25 O5' A A 10 56.881 41.192 105.668 1.00 56.16 O
TER
ATOM 1 O3' G B 7 52.008 38.252 93.597 1.00 52.29 O
ATOM 2 P C B 8 52.953 39.388 94.239 1.00 50.83 P
ATOM 3 OP1 C B 8 52.693 40.612 93.454 1.00 50.59 O
ATOM 4 OP2 C B 8 54.343 38.877 94.358 1.00 49.82 O
ATOM 5 O5' C B 8 52.383 39.588 95.715 1.00 50.35 O
ATOM 6 C5' C B 8 51.143 40.288 95.948 1.00 50.10 C
ATOM 7 C4' C B 8 50.673 40.087 97.376 1.00 51.57 C
ATOM 8 O4' C B 8 50.518 38.666 97.640 1.00 51.78 O
ATOM 9 C3' C B 8 51.594 40.539 98.501 1.00 52.13 C
ATOM 10 O3' C B 8 51.487 41.937 98.747 1.00 53.17 O
ATOM 11 C2' C B 8 51.032 39.760 99.684 1.00 51.42 C
ATOM 12 O2' C B 8 49.840 40.327 100.194 1.00 52.72 O
ATOM 13 C1' C B 8 50.688 38.423 99.026 1.00 50.32 C
ATOM 14 N1 C B 8 51.741 37.409 99.231 1.00 51.09 N
ATOM 15 C2 C B 8 51.817 36.774 100.488 1.00 52.40 C
ATOM 16 O2 C B 8 50.958 37.041 101.352 1.00 52.52 O
ATOM 17 N3 C B 8 52.819 35.894 100.726 1.00 50.58 N
ATOM 18 C4 C B 8 53.717 35.633 99.774 1.00 50.27 C
ATOM 19 N4 C B 8 54.720 34.796 100.075 1.00 48.85 N
ATOM 20 C5 C B 8 53.637 36.227 98.476 1.00 47.89 C
ATOM 21 C6 C B 8 52.643 37.098 98.249 1.00 47.86 C
ATOM 22 P C B 9 52.791 42.881 98.661 1.00 53.77 P
ATOM 23 OP1 C B 9 52.321 44.184 99.183 1.00 54.03 O
ATOM 24 OP2 C B 9 53.350 42.792 97.293 1.00 53.93 O
ATOM 25 O5' C B 9 53.874 42.261 99.662 1.00 51.72 O
TER
ATOM 2 P C A 9 52.791 42.881 98.661 1.00 53.77 P
ATOM 3 OP1 C A 9 52.321 44.184 99.183 1.00 54.03 O
ATOM 4 OP2 C A 9 53.350 42.792 97.293 1.00 53.93 O
ATOM 5 O5' C A 9 53.874 42.261 99.662 1.00 51.72 O
ATOM 6 C5' C A 9 53.602 42.134 101.070 1.00 50.09 C
ATOM 7 C4' C A 9 54.602 41.201 101.737 1.00 50.32 C
ATOM 8 O4' C A 9 54.707 39.962 100.974 1.00 49.40 O
ATOM 9 C3' C A 9 56.034 41.696 101.929 1.00 49.41 C
ATOM 10 O3' C A 9 56.536 41.173 103.155 1.00 52.57 O
ATOM 11 C2' C A 9 56.773 41.040 100.770 1.00 48.48 C
ATOM 12 O2' C A 9 58.144 40.844 101.029 1.00 47.73 O
ATOM 13 C1' C A 9 56.064 39.694 100.686 1.00 47.54 C
ATOM 14 N1 C A 9 56.145 39.057 99.362 1.00 45.90 N
ATOM 15 C2 C A 9 56.853 37.849 99.225 1.00 46.20 C
ATOM 16 O2 C A 9 57.419 37.355 100.214 1.00 44.77 O
ATOM 17 N3 C A 9 56.911 37.257 98.013 1.00 46.59 N
ATOM 18 C4 C A 9 56.314 37.825 96.961 1.00 46.84 C
ATOM 19 N4 C A 9 56.402 37.203 95.781 1.00 49.15 N
ATOM 20 C5 C A 9 55.602 39.051 97.070 1.00 46.75 C
ATOM 21 C6 C A 9 55.541 39.627 98.276 1.00 46.29 C
ATOM 22 P A A 10 56.784 42.156 104.407 1.00 55.12 P
ATOM 23 OP1 A A 10 55.596 43.036 104.577 1.00 54.42 O
ATOM 24 OP2 A A 10 58.125 42.752 104.233 1.00 56.23 O
ATOM 25 O5' A A 10 56.881 41.192 105.668 1.00 56.16 O
TER
ATOM 1 O3' G B 7 52.008 38.252 93.597 1.00 52.29 O
ATOM 2 P C B 8 52.953 39.388 94.239 1.00 50.83 P
ATOM 3 OP1 C B 8 52.693 40.612 93.454 1.00 50.59 O
ATOM 4 OP2 C B 8 54.343 38.877 94.358 1.00 49.82 O
ATOM 5 O5' C B 8 52.383 39.588 95.715 1.00 50.35 O
ATOM 6 C5' C B 8 51.143 40.288 95.948 1.00 50.10 C
ATOM 7 C4' C B 8 50.673 40.087 97.376 1.00 51.57 C
ATOM 8 O4' C B 8 50.518 38.666 97.640 1.00 51.78 O
ATOM 9 C3' C B 8 51.594 40.539 98.501 1.00 52.13 C
ATOM 10 O3' C B 8 51.487 41.937 98.747 1.00 53.17 O
ATOM 11 C2' C B 8 51.032 39.760 99.684 1.00 51.42 C
ATOM 12 O2' C B 8 49.840 40.327 100.194 1.00 52.72 O
ATOM 13 C1' C B 8 50.688 38.423 99.026 1.00 50.32 C
ATOM 14 N1 C B 8 51.741 37.409 99.231 1.00 51.09 N
ATOM 15 C2 C B 8 51.817 36.774 100.488 1.00 52.40 C
ATOM 16 O2 C B 8 50.958 37.041 101.352 1.00 52.52 O
ATOM 17 N3 C B 8 52.819 35.894 100.726 1.00 50.58 N
ATOM 18 C4 C B 8 53.717 35.633 99.774 1.00 50.27 C
ATOM 19 N4 C B 8 54.720 34.796 100.075 1.00 48.85 N
ATOM 20 C5 C B 8 53.637 36.227 98.476 1.00 47.89 C
ATOM 21 C6 C B 8 52.643 37.098 98.249 1.00 47.86 C
ATOM 22 P C B 9 52.791 42.881 98.661 1.00 53.77 P
ATOM 23 OP1 C B 9 52.321 44.184 99.183 1.00 54.03 O
ATOM 24 OP2 C B 9 53.350 42.792 97.293 1.00 53.93 O
ATOM 25 O5' C B 9 53.874 42.261 99.662 1.00 51.72 O
TER
Atoms:
C2: (56.853,37.849,99.225)
OP1: (52.321,44.184,99.183)
OP2: (53.350,42.792,97.293)
C4: (56.314,37.825,96.961)
O5': (53.874,42.261,99.662)
C3': (56.034,41.696,101.929)
C1': (56.064,39.694,100.686)
O4': (54.707,39.962,100.974)
C5': (53.602,42.134,101.070)
P: (52.791,42.881,98.661)
O2: (57.419,37.355,100.214)
C4': (54.602,41.201,101.737)
C2': (56.773,41.040,100.770)
O2': (58.144,40.844,101.029)
N1: (56.145,39.057,99.362)
N3: (56.911,37.257,98.013)
N4: (56.402,37.203,95.781)
C6: (55.541,39.627,98.276)
C5: (55.602,39.051,97.070)
O3': (56.536,41.173,103.155)
OP1: (52.321,44.184,99.183)
OP2: (53.350,42.792,97.293)
C4: (56.314,37.825,96.961)
O5': (53.874,42.261,99.662)
C3': (56.034,41.696,101.929)
C1': (56.064,39.694,100.686)
O4': (54.707,39.962,100.974)
C5': (53.602,42.134,101.070)
P: (52.791,42.881,98.661)
O2: (57.419,37.355,100.214)
C4': (54.602,41.201,101.737)
C2': (56.773,41.040,100.770)
O2': (58.144,40.844,101.029)
N1: (56.145,39.057,99.362)
N3: (56.911,37.257,98.013)
N4: (56.402,37.203,95.781)
C6: (55.541,39.627,98.276)
C5: (55.602,39.051,97.070)
O3': (56.536,41.173,103.155)
C2: (51.817,36.774,100.488)
OP1: (52.693,40.612,93.454)
OP2: (54.343,38.877,94.358)
C4: (53.717,35.633,99.774)
O5': (52.383,39.588,95.715)
C3': (51.594,40.539,98.501)
C1': (50.688,38.423,99.026)
O4': (50.518,38.666,97.640)
C5': (51.143,40.288,95.948)
P: (52.953,39.388,94.239)
O2: (50.958,37.041,101.352)
C4': (50.673,40.087,97.376)
C2': (51.032,39.760,99.684)
O2': (49.840,40.327,100.194)
N1: (51.741,37.409,99.231)
N3: (52.819,35.894,100.726)
N4: (54.720,34.796,100.075)
C6: (52.643,37.098,98.249)
C5: (53.637,36.227,98.476)
O3': (51.487,41.937,98.747)
OP1: (52.693,40.612,93.454)
OP2: (54.343,38.877,94.358)
C4: (53.717,35.633,99.774)
O5': (52.383,39.588,95.715)
C3': (51.594,40.539,98.501)
C1': (50.688,38.423,99.026)
O4': (50.518,38.666,97.640)
C5': (51.143,40.288,95.948)
P: (52.953,39.388,94.239)
O2: (50.958,37.041,101.352)
C4': (50.673,40.087,97.376)
C2': (51.032,39.760,99.684)
O2': (49.840,40.327,100.194)
N1: (51.741,37.409,99.231)
N3: (52.819,35.894,100.726)
N4: (54.720,34.796,100.075)
C6: (52.643,37.098,98.249)
C5: (53.637,36.227,98.476)
O3': (51.487,41.937,98.747)
Image (generated by PyMOL):