ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2717:A2718

Extra

PDB:
ATOM 1 O3' G A2716 108.393 205.515 110.733 1.00 83.86 O
ATOM 2 P U A2717 109.203 206.836 111.160 1.00 86.13 P
ATOM 3 OP1 U A2717 109.873 207.304 109.921 1.00 85.97 O
ATOM 4 OP2 U A2717 110.024 206.510 112.366 1.00 84.97 O
ATOM 5 O5' U A2717 108.047 207.887 111.531 1.00 88.98 O
ATOM 6 C5' U A2717 108.338 209.153 112.192 1.00 91.55 C
ATOM 7 C4' U A2717 107.654 210.321 111.485 1.00 92.84 C
ATOM 8 O4' U A2717 108.192 210.470 110.147 1.00 93.68 O
ATOM 9 C3' U A2717 106.145 210.266 111.281 1.00 93.46 C
ATOM 10 O3' U A2717 105.443 210.679 112.449 1.00 92.38 O
ATOM 11 C2' U A2717 105.927 211.229 110.112 1.00 94.38 C
ATOM 12 O2' U A2717 105.853 212.606 110.445 1.00 95.52 O
ATOM 13 C1' U A2717 107.191 210.989 109.284 1.00 94.34 C
ATOM 14 N1 U A2717 107.018 210.061 108.158 1.00 94.53 N
ATOM 15 C2 U A2717 106.378 210.534 107.016 1.00 95.21 C
ATOM 16 O2 U A2717 105.937 211.678 106.911 1.00 95.26 O
ATOM 17 N3 U A2717 106.272 209.619 106.001 1.00 95.79 N
ATOM 18 C4 U A2717 106.720 208.310 106.011 1.00 95.93 C
ATOM 19 O4 U A2717 106.485 207.584 105.042 1.00 96.67 O
ATOM 20 C5 U A2717 107.366 207.907 107.223 1.00 94.76 C
ATOM 21 C6 U A2717 107.485 208.771 108.226 1.00 94.01 C
ATOM 22 P A A2718 104.198 209.816 112.962 1.00 91.23 P
ATOM 23 OP1 A A2718 103.567 210.521 114.111 1.00 91.20 O
ATOM 24 OP2 A A2718 104.722 208.438 113.145 1.00 90.36 O
ATOM 25 O5' A A2718 103.183 209.897 111.732 1.00 91.21 O
TER

ATOM 1 O3' U B2717 105.443 210.679 112.449 1.00 92.38 O
ATOM 2 P A B2718 104.198 209.816 112.962 1.00 91.23 P
ATOM 3 OP1 A B2718 103.567 210.521 114.111 1.00 91.20 O
ATOM 4 OP2 A B2718 104.722 208.438 113.145 1.00 90.36 O
ATOM 5 O5' A B2718 103.183 209.897 111.732 1.00 91.21 O
ATOM 6 C5' A B2718 102.706 211.184 111.280 1.00 90.95 C
ATOM 7 C4' A B2718 102.205 211.116 109.851 1.00 91.69 C
ATOM 8 O4' A B2718 103.255 210.649 108.964 1.00 91.87 O
ATOM 9 C3' A B2718 101.045 210.176 109.574 1.00 91.61 C
ATOM 10 O3' A B2718 99.809 210.785 109.925 1.00 90.46 O
ATOM 11 C2' A B2718 101.160 209.937 108.069 1.00 91.89 C
ATOM 12 O2' A B2718 100.596 210.957 107.268 1.00 92.59 O
ATOM 13 C1' A B2718 102.678 209.936 107.884 1.00 91.67 C
ATOM 14 N9 A B2718 103.238 208.593 107.870 1.00 91.65 N
ATOM 15 C8 A B2718 103.841 207.889 108.882 1.00 91.86 C
ATOM 16 N7 A B2718 104.230 206.689 108.528 1.00 92.49 N
ATOM 17 C5 A B2718 103.857 206.599 107.194 1.00 92.83 C
ATOM 18 C6 A B2718 103.990 205.573 106.242 1.00 93.15 C
ATOM 19 N6 A B2718 104.556 204.393 106.503 1.00 93.83 N
ATOM 20 N1 A B2718 103.515 205.804 104.996 1.00 93.33 N
ATOM 21 C2 A B2718 102.948 206.993 104.737 1.00 93.61 C
ATOM 22 N3 A B2718 102.767 208.036 105.548 1.00 93.48 N
ATOM 23 C4 A B2718 103.249 207.768 106.777 1.00 92.68 C
ATOM 24 P A B2719 98.595 209.873 110.429 1.00 89.14 P
ATOM 25 OP1 A B2719 97.461 210.784 110.732 1.00 89.27 O
ATOM 26 OP2 A B2719 99.141 209.001 111.496 1.00 87.78 O
ATOM 27 O5' A B2719 98.223 208.993 109.148 1.00 88.01 O
TER

Atoms:
C4: (106.720,208.310,106.011)
N3: (106.272,209.619,106.001)
OP1: (109.873,207.304,109.921)
OP2: (110.024,206.510,112.366)
C2: (106.378,210.534,107.016)
C1': (107.191,210.989,109.284)
C3': (106.145,210.266,111.281)
O5': (108.047,207.887,111.531)
O4': (108.192,210.470,110.147)
C5': (108.338,209.153,112.192)
P: (109.203,206.836,111.160)
C4': (107.654,210.321,111.485)
C2': (105.927,211.229,110.112)
O2': (105.853,212.606,110.445)
N1: (107.018,210.061,108.158)
O4: (106.485,207.584,105.042)
O2: (105.937,211.678,106.911)
C6: (107.485,208.771,108.226)
C5: (107.366,207.907,107.223)
O3': (105.443,210.679,112.449)
OP1: (103.567,210.521,114.111)
OP2: (104.722,208.438,113.145)
C3': (101.045,210.176,109.574)
C1': (102.678,209.936,107.884)
C5': (102.706,211.184,111.280)
O4': (103.255,210.649,108.964)
C8: (103.841,207.889,108.882)
O2': (100.596,210.957,107.268)
C6: (103.990,205.573,106.242)
C5: (103.857,206.599,107.194)
C4: (103.249,207.768,106.777)
P: (104.198,209.816,112.962)
C4': (102.205,211.116,109.851)
C2': (101.160,209.937,108.069)
C2: (102.948,206.993,104.737)
N1: (103.515,205.804,104.996)
N3: (102.767,208.036,105.548)
N6: (104.556,204.393,106.503)
N7: (104.230,206.689,108.528)
N9: (103.238,208.593,107.870)
O5': (103.183,209.897,111.732)
O3': (99.809,210.785,109.925)
Image (generated by PyMOL):
PyMOL image
show in jmol