Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1RNA:A3:A4
Extra
PDB:
ATOM 1 O3' A A 2 17.505 8.141 13.235 1.00 12.93 O
ATOM 2 P U A 3 17.202 9.038 11.914 1.00 2.00 P
ATOM 3 OP1 U A 3 18.604 8.980 11.305 1.00 9.22 O
ATOM 4 OP2 U A 3 16.816 10.363 12.209 1.00 5.12 O
ATOM 5 O5' U A 3 16.165 8.266 11.143 1.00 10.36 O
ATOM 6 C5' U A 3 16.172 6.919 10.618 1.00 10.19 C
ATOM 7 C4' U A 3 14.790 6.558 10.131 1.00 9.61 C
ATOM 8 O4' U A 3 13.903 6.602 11.227 1.00 6.89 O
ATOM 9 C3' U A 3 14.091 7.423 9.095 1.00 8.26 C
ATOM 10 O3' U A 3 14.381 7.231 7.710 1.00 11.09 O
ATOM 11 C2' U A 3 12.658 6.955 9.282 1.00 9.03 C
ATOM 12 O2' U A 3 12.713 5.572 8.933 1.00 15.88 O
ATOM 13 C1' U A 3 12.552 6.852 10.780 1.00 5.76 C
ATOM 14 N1 U A 3 12.014 8.083 11.394 1.00 2.00 N
ATOM 15 C2 U A 3 10.649 8.065 11.619 1.00 4.92 C
ATOM 16 O2 U A 3 9.946 7.142 11.212 1.00 9.92 O
ATOM 17 N3 U A 3 10.124 9.136 12.282 1.00 6.09 N
ATOM 18 C4 U A 3 10.878 10.180 12.729 1.00 2.92 C
ATOM 19 O4 U A 3 10.257 11.099 13.328 1.00 2.00 O
ATOM 20 C5 U A 3 12.276 10.162 12.479 1.00 4.04 C
ATOM 21 C6 U A 3 12.791 9.100 11.840 1.00 2.00 C
ATOM 22 P A A 4 14.026 8.320 6.654 1.00 8.18 P
ATOM 23 OP1 A A 4 15.025 8.106 5.594 1.00 10.00 O
ATOM 24 OP2 A A 4 14.275 9.582 7.425 1.00 11.16 O
ATOM 25 O5' A A 4 12.590 8.146 6.178 1.00 13.16 O
TER
ATOM 1 O3' U B 3 14.381 7.231 7.710 1.00 11.09 O
ATOM 2 P A B 4 14.026 8.320 6.654 1.00 8.18 P
ATOM 3 OP1 A B 4 15.025 8.106 5.594 1.00 10.00 O
ATOM 4 OP2 A B 4 14.275 9.582 7.425 1.00 11.16 O
ATOM 5 O5' A B 4 12.590 8.146 6.178 1.00 13.16 O
ATOM 6 C5' A B 4 11.973 7.124 5.343 1.00 14.44 C
ATOM 7 C4' A B 4 10.472 7.271 5.432 1.00 12.02 C
ATOM 8 O4' A B 4 10.086 7.410 6.777 1.00 13.65 O
ATOM 9 C3' A B 4 9.878 8.498 4.769 1.00 13.59 C
ATOM 10 O3' A B 4 9.817 8.405 3.339 1.00 18.15 O
ATOM 11 C2' A B 4 8.531 8.641 5.466 1.00 11.90 C
ATOM 12 O2' A B 4 7.661 7.651 4.945 1.00 15.10 O
ATOM 13 C1' A B 4 8.910 8.235 6.875 1.00 8.89 C
ATOM 14 N9 A B 4 9.165 9.373 7.784 1.00 3.67 N
ATOM 15 C8 A B 4 10.329 9.872 8.309 1.00 2.00 C
ATOM 16 N7 A B 4 10.151 10.871 9.134 1.00 2.58 N
ATOM 17 C5 A B 4 8.766 11.032 9.159 1.00 2.00 C
ATOM 18 C6 A B 4 7.934 11.960 9.832 1.00 4.93 C
ATOM 19 N6 A B 4 8.435 12.883 10.647 1.00 5.39 N
ATOM 20 N1 A B 4 6.593 11.822 9.562 1.00 6.86 N
ATOM 21 C2 A B 4 6.119 10.876 8.702 1.00 7.98 C
ATOM 22 N3 A B 4 6.842 9.984 8.034 1.00 2.26 N
ATOM 23 C4 A B 4 8.149 10.126 8.324 1.00 2.00 C
ATOM 24 P U B 5 10.158 9.828 2.573 1.00 14.24 P
ATOM 25 OP1 U B 5 10.247 9.252 1.193 1.00 20.60 O
ATOM 26 OP2 U B 5 11.447 10.381 3.163 1.00 7.32 O
ATOM 27 O5' U B 5 8.814 10.590 2.912 1.00 10.58 O
TER
ATOM 2 P U A 3 17.202 9.038 11.914 1.00 2.00 P
ATOM 3 OP1 U A 3 18.604 8.980 11.305 1.00 9.22 O
ATOM 4 OP2 U A 3 16.816 10.363 12.209 1.00 5.12 O
ATOM 5 O5' U A 3 16.165 8.266 11.143 1.00 10.36 O
ATOM 6 C5' U A 3 16.172 6.919 10.618 1.00 10.19 C
ATOM 7 C4' U A 3 14.790 6.558 10.131 1.00 9.61 C
ATOM 8 O4' U A 3 13.903 6.602 11.227 1.00 6.89 O
ATOM 9 C3' U A 3 14.091 7.423 9.095 1.00 8.26 C
ATOM 10 O3' U A 3 14.381 7.231 7.710 1.00 11.09 O
ATOM 11 C2' U A 3 12.658 6.955 9.282 1.00 9.03 C
ATOM 12 O2' U A 3 12.713 5.572 8.933 1.00 15.88 O
ATOM 13 C1' U A 3 12.552 6.852 10.780 1.00 5.76 C
ATOM 14 N1 U A 3 12.014 8.083 11.394 1.00 2.00 N
ATOM 15 C2 U A 3 10.649 8.065 11.619 1.00 4.92 C
ATOM 16 O2 U A 3 9.946 7.142 11.212 1.00 9.92 O
ATOM 17 N3 U A 3 10.124 9.136 12.282 1.00 6.09 N
ATOM 18 C4 U A 3 10.878 10.180 12.729 1.00 2.92 C
ATOM 19 O4 U A 3 10.257 11.099 13.328 1.00 2.00 O
ATOM 20 C5 U A 3 12.276 10.162 12.479 1.00 4.04 C
ATOM 21 C6 U A 3 12.791 9.100 11.840 1.00 2.00 C
ATOM 22 P A A 4 14.026 8.320 6.654 1.00 8.18 P
ATOM 23 OP1 A A 4 15.025 8.106 5.594 1.00 10.00 O
ATOM 24 OP2 A A 4 14.275 9.582 7.425 1.00 11.16 O
ATOM 25 O5' A A 4 12.590 8.146 6.178 1.00 13.16 O
TER
ATOM 1 O3' U B 3 14.381 7.231 7.710 1.00 11.09 O
ATOM 2 P A B 4 14.026 8.320 6.654 1.00 8.18 P
ATOM 3 OP1 A B 4 15.025 8.106 5.594 1.00 10.00 O
ATOM 4 OP2 A B 4 14.275 9.582 7.425 1.00 11.16 O
ATOM 5 O5' A B 4 12.590 8.146 6.178 1.00 13.16 O
ATOM 6 C5' A B 4 11.973 7.124 5.343 1.00 14.44 C
ATOM 7 C4' A B 4 10.472 7.271 5.432 1.00 12.02 C
ATOM 8 O4' A B 4 10.086 7.410 6.777 1.00 13.65 O
ATOM 9 C3' A B 4 9.878 8.498 4.769 1.00 13.59 C
ATOM 10 O3' A B 4 9.817 8.405 3.339 1.00 18.15 O
ATOM 11 C2' A B 4 8.531 8.641 5.466 1.00 11.90 C
ATOM 12 O2' A B 4 7.661 7.651 4.945 1.00 15.10 O
ATOM 13 C1' A B 4 8.910 8.235 6.875 1.00 8.89 C
ATOM 14 N9 A B 4 9.165 9.373 7.784 1.00 3.67 N
ATOM 15 C8 A B 4 10.329 9.872 8.309 1.00 2.00 C
ATOM 16 N7 A B 4 10.151 10.871 9.134 1.00 2.58 N
ATOM 17 C5 A B 4 8.766 11.032 9.159 1.00 2.00 C
ATOM 18 C6 A B 4 7.934 11.960 9.832 1.00 4.93 C
ATOM 19 N6 A B 4 8.435 12.883 10.647 1.00 5.39 N
ATOM 20 N1 A B 4 6.593 11.822 9.562 1.00 6.86 N
ATOM 21 C2 A B 4 6.119 10.876 8.702 1.00 7.98 C
ATOM 22 N3 A B 4 6.842 9.984 8.034 1.00 2.26 N
ATOM 23 C4 A B 4 8.149 10.126 8.324 1.00 2.00 C
ATOM 24 P U B 5 10.158 9.828 2.573 1.00 14.24 P
ATOM 25 OP1 U B 5 10.247 9.252 1.193 1.00 20.60 O
ATOM 26 OP2 U B 5 11.447 10.381 3.163 1.00 7.32 O
ATOM 27 O5' U B 5 8.814 10.590 2.912 1.00 10.58 O
TER
Atoms:
C4: (10.878,10.180,12.729)
N3: (10.124,9.136,12.282)
OP1: (18.604,8.980,11.305)
OP2: (16.816,10.363,12.209)
C2: (10.649,8.065,11.619)
C1': (12.552,6.852,10.780)
C3': (14.091,7.423,9.095)
O5': (16.165,8.266,11.143)
O4': (13.903,6.602,11.227)
C5': (16.172,6.919,10.618)
P: (17.202,9.038,11.914)
C4': (14.790,6.558,10.131)
C2': (12.658,6.955,9.282)
O2': (12.713,5.572,8.933)
N1: (12.014,8.083,11.394)
O4: (10.257,11.099,13.328)
O2: (9.946,7.142,11.212)
C6: (12.791,9.100,11.840)
C5: (12.276,10.162,12.479)
O3': (14.381,7.231,7.710)
N3: (10.124,9.136,12.282)
OP1: (18.604,8.980,11.305)
OP2: (16.816,10.363,12.209)
C2: (10.649,8.065,11.619)
C1': (12.552,6.852,10.780)
C3': (14.091,7.423,9.095)
O5': (16.165,8.266,11.143)
O4': (13.903,6.602,11.227)
C5': (16.172,6.919,10.618)
P: (17.202,9.038,11.914)
C4': (14.790,6.558,10.131)
C2': (12.658,6.955,9.282)
O2': (12.713,5.572,8.933)
N1: (12.014,8.083,11.394)
O4: (10.257,11.099,13.328)
O2: (9.946,7.142,11.212)
C6: (12.791,9.100,11.840)
C5: (12.276,10.162,12.479)
O3': (14.381,7.231,7.710)
OP1: (15.025,8.106,5.594)
OP2: (14.275,9.582,7.425)
C3': (9.878,8.498,4.769)
C1': (8.910,8.235,6.875)
C5': (11.973,7.124,5.343)
O4': (10.086,7.410,6.777)
C8: (10.329,9.872,8.309)
O2': (7.661,7.651,4.945)
C6: (7.934,11.960,9.832)
C5: (8.766,11.032,9.159)
C4: (8.149,10.126,8.324)
P: (14.026,8.320,6.654)
C4': (10.472,7.271,5.432)
C2': (8.531,8.641,5.466)
C2: (6.119,10.876,8.702)
N1: (6.593,11.822,9.562)
N3: (6.842,9.984,8.034)
N6: (8.435,12.883,10.647)
N7: (10.151,10.871,9.134)
N9: (9.165,9.373,7.784)
O5': (12.590,8.146,6.178)
O3': (9.817,8.405,3.339)
OP2: (14.275,9.582,7.425)
C3': (9.878,8.498,4.769)
C1': (8.910,8.235,6.875)
C5': (11.973,7.124,5.343)
O4': (10.086,7.410,6.777)
C8: (10.329,9.872,8.309)
O2': (7.661,7.651,4.945)
C6: (7.934,11.960,9.832)
C5: (8.766,11.032,9.159)
C4: (8.149,10.126,8.324)
P: (14.026,8.320,6.654)
C4': (10.472,7.271,5.432)
C2': (8.531,8.641,5.466)
C2: (6.119,10.876,8.702)
N1: (6.593,11.822,9.562)
N3: (6.842,9.984,8.034)
N6: (8.435,12.883,10.647)
N7: (10.151,10.871,9.134)
N9: (9.165,9.373,7.784)
O5': (12.590,8.146,6.178)
O3': (9.817,8.405,3.339)
Image (generated by PyMOL):