Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0221:0222
Extra
PDB:
ATOM 1 O3' A A 220 48.199 101.084 21.946 1.00 40.87 O
ATOM 2 P U A 221 48.398 101.841 20.546 1.00 42.01 P
ATOM 3 OP1 U A 221 47.037 102.234 20.100 1.00 38.48 O
ATOM 4 OP2 U A 221 49.275 101.012 19.665 1.00 34.22 O
ATOM 5 O5' U A 221 49.192 103.158 20.962 1.00 41.52 O
ATOM 6 C5' U A 221 48.601 104.101 21.870 1.00 40.58 C
ATOM 7 C4' U A 221 49.634 105.085 22.335 1.00 42.86 C
ATOM 8 O4' U A 221 50.663 104.405 23.099 1.00 43.37 O
ATOM 9 C3' U A 221 50.402 105.783 21.231 1.00 41.75 C
ATOM 10 O3' U A 221 49.621 106.846 20.704 1.00 43.55 O
ATOM 11 C2' U A 221 51.647 106.254 21.969 1.00 41.76 C
ATOM 12 O2' U A 221 51.386 107.395 22.759 1.00 44.81 O
ATOM 13 C1' U A 221 51.904 105.068 22.906 1.00 43.15 C
ATOM 14 N1 U A 221 52.868 104.090 22.385 1.00 42.92 N
ATOM 15 C2 U A 221 54.211 104.315 22.620 1.00 44.40 C
ATOM 16 O2 U A 221 54.626 105.293 23.215 1.00 47.92 O
ATOM 17 N3 U A 221 55.053 103.349 22.130 1.00 43.14 N
ATOM 18 C4 U A 221 54.695 102.216 21.429 1.00 42.56 C
ATOM 19 O4 U A 221 55.568 101.439 21.049 1.00 44.49 O
ATOM 20 C5 U A 221 53.295 102.064 21.213 1.00 41.48 C
ATOM 21 C6 U A 221 52.449 102.979 21.687 1.00 42.83 C
ATOM 22 P A A 222 49.379 106.951 19.117 1.00 45.39 P
ATOM 23 OP1 A A 222 48.367 108.023 18.932 1.00 43.24 O
ATOM 24 OP2 A A 222 49.146 105.612 18.528 1.00 45.13 O
ATOM 25 O5' A A 222 50.781 107.457 18.568 1.00 45.18 O
TER
ATOM 1 O3' U B 221 49.621 106.846 20.704 1.00 43.55 O
ATOM 2 P A B 222 49.379 106.951 19.117 1.00 45.39 P
ATOM 3 OP1 A B 222 48.367 108.023 18.932 1.00 43.24 O
ATOM 4 OP2 A B 222 49.146 105.612 18.528 1.00 45.13 O
ATOM 5 O5' A B 222 50.781 107.457 18.568 1.00 45.18 O
ATOM 6 C5' A B 222 51.379 108.642 19.110 1.00 45.40 C
ATOM 7 C4' A B 222 52.854 108.644 18.850 1.00 45.11 C
ATOM 8 O4' A B 222 53.490 107.578 19.599 1.00 42.80 O
ATOM 9 C3' A B 222 53.256 108.358 17.418 1.00 45.37 C
ATOM 10 O3' A B 222 53.075 109.499 16.593 1.00 49.02 O
ATOM 11 C2' A B 222 54.707 107.918 17.586 1.00 45.17 C
ATOM 12 O2' A B 222 55.621 108.980 17.810 1.00 44.45 O
ATOM 13 C1' A B 222 54.605 107.088 18.866 1.00 43.83 C
ATOM 14 N9 A B 222 54.385 105.676 18.571 1.00 42.04 N
ATOM 15 C8 A B 222 53.193 105.009 18.417 1.00 42.00 C
ATOM 16 N7 A B 222 53.335 103.736 18.146 1.00 41.90 N
ATOM 17 C5 A B 222 54.710 103.551 18.123 1.00 39.42 C
ATOM 18 C6 A B 222 55.500 102.423 17.894 1.00 39.99 C
ATOM 19 N6 A B 222 54.998 101.214 17.646 1.00 43.16 N
ATOM 20 N1 A B 222 56.842 102.573 17.930 1.00 41.43 N
ATOM 21 C2 A B 222 57.341 103.787 18.190 1.00 40.93 C
ATOM 22 N3 A B 222 56.697 104.927 18.429 1.00 40.27 N
ATOM 23 C4 A B 222 55.368 104.737 18.379 1.00 40.66 C
ATOM 24 P C B 223 53.280 109.369 15.004 1.00 50.63 P
ATOM 25 OP1 C B 223 53.236 110.757 14.470 1.00 53.56 O
ATOM 26 OP2 C B 223 52.375 108.331 14.440 1.00 50.52 O
ATOM 27 O5' C B 223 54.776 108.847 14.899 1.00 49.86 O
TER
ATOM 2 P U A 221 48.398 101.841 20.546 1.00 42.01 P
ATOM 3 OP1 U A 221 47.037 102.234 20.100 1.00 38.48 O
ATOM 4 OP2 U A 221 49.275 101.012 19.665 1.00 34.22 O
ATOM 5 O5' U A 221 49.192 103.158 20.962 1.00 41.52 O
ATOM 6 C5' U A 221 48.601 104.101 21.870 1.00 40.58 C
ATOM 7 C4' U A 221 49.634 105.085 22.335 1.00 42.86 C
ATOM 8 O4' U A 221 50.663 104.405 23.099 1.00 43.37 O
ATOM 9 C3' U A 221 50.402 105.783 21.231 1.00 41.75 C
ATOM 10 O3' U A 221 49.621 106.846 20.704 1.00 43.55 O
ATOM 11 C2' U A 221 51.647 106.254 21.969 1.00 41.76 C
ATOM 12 O2' U A 221 51.386 107.395 22.759 1.00 44.81 O
ATOM 13 C1' U A 221 51.904 105.068 22.906 1.00 43.15 C
ATOM 14 N1 U A 221 52.868 104.090 22.385 1.00 42.92 N
ATOM 15 C2 U A 221 54.211 104.315 22.620 1.00 44.40 C
ATOM 16 O2 U A 221 54.626 105.293 23.215 1.00 47.92 O
ATOM 17 N3 U A 221 55.053 103.349 22.130 1.00 43.14 N
ATOM 18 C4 U A 221 54.695 102.216 21.429 1.00 42.56 C
ATOM 19 O4 U A 221 55.568 101.439 21.049 1.00 44.49 O
ATOM 20 C5 U A 221 53.295 102.064 21.213 1.00 41.48 C
ATOM 21 C6 U A 221 52.449 102.979 21.687 1.00 42.83 C
ATOM 22 P A A 222 49.379 106.951 19.117 1.00 45.39 P
ATOM 23 OP1 A A 222 48.367 108.023 18.932 1.00 43.24 O
ATOM 24 OP2 A A 222 49.146 105.612 18.528 1.00 45.13 O
ATOM 25 O5' A A 222 50.781 107.457 18.568 1.00 45.18 O
TER
ATOM 1 O3' U B 221 49.621 106.846 20.704 1.00 43.55 O
ATOM 2 P A B 222 49.379 106.951 19.117 1.00 45.39 P
ATOM 3 OP1 A B 222 48.367 108.023 18.932 1.00 43.24 O
ATOM 4 OP2 A B 222 49.146 105.612 18.528 1.00 45.13 O
ATOM 5 O5' A B 222 50.781 107.457 18.568 1.00 45.18 O
ATOM 6 C5' A B 222 51.379 108.642 19.110 1.00 45.40 C
ATOM 7 C4' A B 222 52.854 108.644 18.850 1.00 45.11 C
ATOM 8 O4' A B 222 53.490 107.578 19.599 1.00 42.80 O
ATOM 9 C3' A B 222 53.256 108.358 17.418 1.00 45.37 C
ATOM 10 O3' A B 222 53.075 109.499 16.593 1.00 49.02 O
ATOM 11 C2' A B 222 54.707 107.918 17.586 1.00 45.17 C
ATOM 12 O2' A B 222 55.621 108.980 17.810 1.00 44.45 O
ATOM 13 C1' A B 222 54.605 107.088 18.866 1.00 43.83 C
ATOM 14 N9 A B 222 54.385 105.676 18.571 1.00 42.04 N
ATOM 15 C8 A B 222 53.193 105.009 18.417 1.00 42.00 C
ATOM 16 N7 A B 222 53.335 103.736 18.146 1.00 41.90 N
ATOM 17 C5 A B 222 54.710 103.551 18.123 1.00 39.42 C
ATOM 18 C6 A B 222 55.500 102.423 17.894 1.00 39.99 C
ATOM 19 N6 A B 222 54.998 101.214 17.646 1.00 43.16 N
ATOM 20 N1 A B 222 56.842 102.573 17.930 1.00 41.43 N
ATOM 21 C2 A B 222 57.341 103.787 18.190 1.00 40.93 C
ATOM 22 N3 A B 222 56.697 104.927 18.429 1.00 40.27 N
ATOM 23 C4 A B 222 55.368 104.737 18.379 1.00 40.66 C
ATOM 24 P C B 223 53.280 109.369 15.004 1.00 50.63 P
ATOM 25 OP1 C B 223 53.236 110.757 14.470 1.00 53.56 O
ATOM 26 OP2 C B 223 52.375 108.331 14.440 1.00 50.52 O
ATOM 27 O5' C B 223 54.776 108.847 14.899 1.00 49.86 O
TER
Atoms:
C4: (54.695,102.216,21.429)
N3: (55.053,103.349,22.130)
OP1: (47.037,102.234,20.100)
OP2: (49.275,101.012,19.665)
C2: (54.211,104.315,22.620)
C1': (51.904,105.068,22.906)
C3': (50.402,105.783,21.231)
O5': (49.192,103.158,20.962)
O4': (50.663,104.405,23.099)
C5': (48.601,104.101,21.870)
P: (48.398,101.841,20.546)
C4': (49.634,105.085,22.335)
C2': (51.647,106.254,21.969)
O2': (51.386,107.395,22.759)
N1: (52.868,104.090,22.385)
O4: (55.568,101.439,21.049)
O2: (54.626,105.293,23.215)
C6: (52.449,102.979,21.687)
C5: (53.295,102.064,21.213)
O3': (49.621,106.846,20.704)
N3: (55.053,103.349,22.130)
OP1: (47.037,102.234,20.100)
OP2: (49.275,101.012,19.665)
C2: (54.211,104.315,22.620)
C1': (51.904,105.068,22.906)
C3': (50.402,105.783,21.231)
O5': (49.192,103.158,20.962)
O4': (50.663,104.405,23.099)
C5': (48.601,104.101,21.870)
P: (48.398,101.841,20.546)
C4': (49.634,105.085,22.335)
C2': (51.647,106.254,21.969)
O2': (51.386,107.395,22.759)
N1: (52.868,104.090,22.385)
O4: (55.568,101.439,21.049)
O2: (54.626,105.293,23.215)
C6: (52.449,102.979,21.687)
C5: (53.295,102.064,21.213)
O3': (49.621,106.846,20.704)
OP1: (48.367,108.023,18.932)
OP2: (49.146,105.612,18.528)
C3': (53.256,108.358,17.418)
C1': (54.605,107.088,18.866)
C5': (51.379,108.642,19.110)
O4': (53.490,107.578,19.599)
C8: (53.193,105.009,18.417)
O2': (55.621,108.980,17.810)
C6: (55.500,102.423,17.894)
C5: (54.710,103.551,18.123)
C4: (55.368,104.737,18.379)
P: (49.379,106.951,19.117)
C4': (52.854,108.644,18.850)
C2': (54.707,107.918,17.586)
C2: (57.341,103.787,18.190)
N1: (56.842,102.573,17.930)
N3: (56.697,104.927,18.429)
N6: (54.998,101.214,17.646)
N7: (53.335,103.736,18.146)
N9: (54.385,105.676,18.571)
O5': (50.781,107.457,18.568)
O3': (53.075,109.499,16.593)
OP2: (49.146,105.612,18.528)
C3': (53.256,108.358,17.418)
C1': (54.605,107.088,18.866)
C5': (51.379,108.642,19.110)
O4': (53.490,107.578,19.599)
C8: (53.193,105.009,18.417)
O2': (55.621,108.980,17.810)
C6: (55.500,102.423,17.894)
C5: (54.710,103.551,18.123)
C4: (55.368,104.737,18.379)
P: (49.379,106.951,19.117)
C4': (52.854,108.644,18.850)
C2': (54.707,107.918,17.586)
C2: (57.341,103.787,18.190)
N1: (56.842,102.573,17.930)
N3: (56.697,104.927,18.429)
N6: (54.998,101.214,17.646)
N7: (53.335,103.736,18.146)
N9: (54.385,105.676,18.571)
O5': (50.781,107.457,18.568)
O3': (53.075,109.499,16.593)
Image (generated by PyMOL):