Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:364:362
Extra
PDB:
ATOM 1 O3' A A 63 17.977 -60.369 -0.445 1.00 78.05 O
ATOM 2 P G A 64 18.095 -59.862 1.060 1.00 73.44 P
ATOM 3 OP1 G A 64 18.426 -58.424 1.006 1.00 72.93 O
ATOM 4 OP2 G A 64 19.031 -60.783 1.730 1.00 73.17 O
ATOM 5 O5' G A 64 16.623 -60.054 1.652 1.00 73.33 O
ATOM 6 C5' G A 64 16.287 -61.215 2.402 1.00 73.29 C
ATOM 7 C4' G A 64 14.982 -61.056 3.147 1.00 72.95 C
ATOM 8 O4' G A 64 14.318 -62.339 3.221 1.00 73.48 O
ATOM 9 C3' G A 64 15.094 -60.603 4.598 1.00 71.79 C
ATOM 10 O3' G A 64 15.112 -59.191 4.736 1.00 71.20 O
ATOM 11 C2' G A 64 13.893 -61.273 5.263 1.00 71.80 C
ATOM 12 O2' G A 64 12.694 -60.567 4.974 1.00 71.95 O
ATOM 13 C1' G A 64 13.853 -62.588 4.519 1.00 72.78 C
ATOM 14 N9 G A 64 14.753 -63.572 5.115 1.00 72.59 N
ATOM 15 C8 G A 64 15.761 -64.174 4.419 1.00 73.11 C
ATOM 16 N7 G A 64 16.450 -65.018 5.140 1.00 72.83 N
ATOM 17 C5 G A 64 15.880 -64.959 6.401 1.00 72.06 C
ATOM 18 C6 G A 64 16.215 -65.658 7.603 1.00 71.48 C
ATOM 19 O6 G A 64 17.112 -66.491 7.817 1.00 71.50 O
ATOM 20 N1 G A 64 15.366 -65.297 8.642 1.00 70.81 N
ATOM 21 C2 G A 64 14.332 -64.399 8.528 1.00 70.73 C
ATOM 22 N2 G A 64 13.602 -64.201 9.626 1.00 70.08 N
ATOM 23 N3 G A 64 14.011 -63.742 7.417 1.00 71.27 N
ATOM 24 C4 G A 64 14.821 -64.064 6.391 1.00 71.92 C
ATOM 25 P A A 65 16.302 -58.488 5.534 1.00 72.21 P
ATOM 26 OP1 A A 65 16.340 -57.048 5.144 1.00 71.97 O
ATOM 27 OP2 A A 65 17.467 -59.301 5.293 1.00 72.45 O
ATOM 28 O5' A A 65 15.838 -58.624 7.045 1.00 71.34 O
TER
ATOM 1 O3' U B 61 17.540 -70.136 -2.279 1.00 86.44 O
ATOM 2 P A B 62 18.247 -68.683 -2.228 1.00 80.83 P
ATOM 3 OP1 A B 62 18.434 -68.233 -3.616 1.00 81.63 O
ATOM 4 OP2 A B 62 19.445 -68.801 -1.356 1.00 80.08 O
ATOM 5 O5' A B 62 17.144 -67.782 -1.515 1.00 80.12 O
ATOM 6 C5' A B 62 15.863 -67.594 -2.102 1.00 80.66 C
ATOM 7 C4' A B 62 14.986 -66.680 -1.275 1.00 79.84 C
ATOM 8 O4' A B 62 14.671 -67.320 -0.010 1.00 79.26 O
ATOM 9 C3' A B 62 15.589 -65.322 -0.922 1.00 78.95 C
ATOM 10 O3' A B 62 14.547 -64.352 -0.858 1.00 78.70 O
ATOM 11 C2' A B 62 16.122 -65.570 0.483 1.00 77.98 C
ATOM 12 O2' A B 62 16.323 -64.402 1.266 1.00 76.95 O
ATOM 13 C1' A B 62 15.022 -66.454 1.047 1.00 78.12 C
ATOM 14 N9 A B 62 15.426 -67.252 2.204 1.00 77.57 N
ATOM 15 C8 A B 62 16.439 -68.160 2.387 1.00 77.64 C
ATOM 16 N7 A B 62 16.497 -68.651 3.610 1.00 76.99 N
ATOM 17 C5 A B 62 15.462 -68.016 4.259 1.00 76.46 C
ATOM 18 C6 A B 62 14.981 -68.081 5.572 1.00 75.69 C
ATOM 19 N6 A B 62 15.505 -68.857 6.503 1.00 75.28 N
ATOM 20 N1 A B 62 13.921 -67.312 5.904 1.00 75.35 N
ATOM 21 C2 A B 62 13.390 -66.528 4.949 1.00 75.77 C
ATOM 22 N3 A B 62 13.745 -66.373 3.670 1.00 76.51 N
ATOM 23 C4 A B 62 14.798 -67.159 3.402 1.00 76.82 C
ATOM 24 P A B 63 13.929 -63.738 -2.204 1.00 81.18 P
ATOM 25 OP1 A B 63 12.623 -63.112 -1.844 1.00 80.90 O
ATOM 26 OP2 A B 63 13.945 -64.793 -3.226 1.00 82.31 O
ATOM 27 O5' A B 63 14.985 -62.626 -2.606 1.00 80.87 O
TER
ATOM 2 P G A 64 18.095 -59.862 1.060 1.00 73.44 P
ATOM 3 OP1 G A 64 18.426 -58.424 1.006 1.00 72.93 O
ATOM 4 OP2 G A 64 19.031 -60.783 1.730 1.00 73.17 O
ATOM 5 O5' G A 64 16.623 -60.054 1.652 1.00 73.33 O
ATOM 6 C5' G A 64 16.287 -61.215 2.402 1.00 73.29 C
ATOM 7 C4' G A 64 14.982 -61.056 3.147 1.00 72.95 C
ATOM 8 O4' G A 64 14.318 -62.339 3.221 1.00 73.48 O
ATOM 9 C3' G A 64 15.094 -60.603 4.598 1.00 71.79 C
ATOM 10 O3' G A 64 15.112 -59.191 4.736 1.00 71.20 O
ATOM 11 C2' G A 64 13.893 -61.273 5.263 1.00 71.80 C
ATOM 12 O2' G A 64 12.694 -60.567 4.974 1.00 71.95 O
ATOM 13 C1' G A 64 13.853 -62.588 4.519 1.00 72.78 C
ATOM 14 N9 G A 64 14.753 -63.572 5.115 1.00 72.59 N
ATOM 15 C8 G A 64 15.761 -64.174 4.419 1.00 73.11 C
ATOM 16 N7 G A 64 16.450 -65.018 5.140 1.00 72.83 N
ATOM 17 C5 G A 64 15.880 -64.959 6.401 1.00 72.06 C
ATOM 18 C6 G A 64 16.215 -65.658 7.603 1.00 71.48 C
ATOM 19 O6 G A 64 17.112 -66.491 7.817 1.00 71.50 O
ATOM 20 N1 G A 64 15.366 -65.297 8.642 1.00 70.81 N
ATOM 21 C2 G A 64 14.332 -64.399 8.528 1.00 70.73 C
ATOM 22 N2 G A 64 13.602 -64.201 9.626 1.00 70.08 N
ATOM 23 N3 G A 64 14.011 -63.742 7.417 1.00 71.27 N
ATOM 24 C4 G A 64 14.821 -64.064 6.391 1.00 71.92 C
ATOM 25 P A A 65 16.302 -58.488 5.534 1.00 72.21 P
ATOM 26 OP1 A A 65 16.340 -57.048 5.144 1.00 71.97 O
ATOM 27 OP2 A A 65 17.467 -59.301 5.293 1.00 72.45 O
ATOM 28 O5' A A 65 15.838 -58.624 7.045 1.00 71.34 O
TER
ATOM 1 O3' U B 61 17.540 -70.136 -2.279 1.00 86.44 O
ATOM 2 P A B 62 18.247 -68.683 -2.228 1.00 80.83 P
ATOM 3 OP1 A B 62 18.434 -68.233 -3.616 1.00 81.63 O
ATOM 4 OP2 A B 62 19.445 -68.801 -1.356 1.00 80.08 O
ATOM 5 O5' A B 62 17.144 -67.782 -1.515 1.00 80.12 O
ATOM 6 C5' A B 62 15.863 -67.594 -2.102 1.00 80.66 C
ATOM 7 C4' A B 62 14.986 -66.680 -1.275 1.00 79.84 C
ATOM 8 O4' A B 62 14.671 -67.320 -0.010 1.00 79.26 O
ATOM 9 C3' A B 62 15.589 -65.322 -0.922 1.00 78.95 C
ATOM 10 O3' A B 62 14.547 -64.352 -0.858 1.00 78.70 O
ATOM 11 C2' A B 62 16.122 -65.570 0.483 1.00 77.98 C
ATOM 12 O2' A B 62 16.323 -64.402 1.266 1.00 76.95 O
ATOM 13 C1' A B 62 15.022 -66.454 1.047 1.00 78.12 C
ATOM 14 N9 A B 62 15.426 -67.252 2.204 1.00 77.57 N
ATOM 15 C8 A B 62 16.439 -68.160 2.387 1.00 77.64 C
ATOM 16 N7 A B 62 16.497 -68.651 3.610 1.00 76.99 N
ATOM 17 C5 A B 62 15.462 -68.016 4.259 1.00 76.46 C
ATOM 18 C6 A B 62 14.981 -68.081 5.572 1.00 75.69 C
ATOM 19 N6 A B 62 15.505 -68.857 6.503 1.00 75.28 N
ATOM 20 N1 A B 62 13.921 -67.312 5.904 1.00 75.35 N
ATOM 21 C2 A B 62 13.390 -66.528 4.949 1.00 75.77 C
ATOM 22 N3 A B 62 13.745 -66.373 3.670 1.00 76.51 N
ATOM 23 C4 A B 62 14.798 -67.159 3.402 1.00 76.82 C
ATOM 24 P A B 63 13.929 -63.738 -2.204 1.00 81.18 P
ATOM 25 OP1 A B 63 12.623 -63.112 -1.844 1.00 80.90 O
ATOM 26 OP2 A B 63 13.945 -64.793 -3.226 1.00 82.31 O
ATOM 27 O5' A B 63 14.985 -62.626 -2.606 1.00 80.87 O
TER
Atoms:
OP1: (18.426,-58.424,1.006)
OP2: (19.031,-60.783,1.730)
C3': (15.094,-60.603,4.598)
C1': (13.853,-62.588,4.519)
C5': (16.287,-61.215,2.402)
O6: (17.112,-66.491,7.817)
O4': (14.318,-62.339,3.221)
C8: (15.761,-64.174,4.419)
C2: (14.332,-64.399,8.528)
C6: (16.215,-65.658,7.603)
C5: (15.880,-64.959,6.401)
C4: (14.821,-64.064,6.391)
P: (18.095,-59.862,1.060)
C4': (14.982,-61.056,3.147)
C2': (13.893,-61.273,5.263)
O2': (12.694,-60.567,4.974)
N1: (15.366,-65.297,8.642)
N2: (13.602,-64.201,9.626)
N3: (14.011,-63.742,7.417)
N7: (16.450,-65.018,5.140)
N9: (14.753,-63.572,5.115)
O5': (16.623,-60.054,1.652)
O3': (15.112,-59.191,4.736)
OP2: (19.031,-60.783,1.730)
C3': (15.094,-60.603,4.598)
C1': (13.853,-62.588,4.519)
C5': (16.287,-61.215,2.402)
O6: (17.112,-66.491,7.817)
O4': (14.318,-62.339,3.221)
C8: (15.761,-64.174,4.419)
C2: (14.332,-64.399,8.528)
C6: (16.215,-65.658,7.603)
C5: (15.880,-64.959,6.401)
C4: (14.821,-64.064,6.391)
P: (18.095,-59.862,1.060)
C4': (14.982,-61.056,3.147)
C2': (13.893,-61.273,5.263)
O2': (12.694,-60.567,4.974)
N1: (15.366,-65.297,8.642)
N2: (13.602,-64.201,9.626)
N3: (14.011,-63.742,7.417)
N7: (16.450,-65.018,5.140)
N9: (14.753,-63.572,5.115)
O5': (16.623,-60.054,1.652)
O3': (15.112,-59.191,4.736)
OP1: (18.434,-68.233,-3.616)
OP2: (19.445,-68.801,-1.356)
C3': (15.589,-65.322,-0.922)
C1': (15.022,-66.454,1.047)
C5': (15.863,-67.594,-2.102)
O4': (14.671,-67.320,-0.010)
C8: (16.439,-68.160,2.387)
O2': (16.323,-64.402,1.266)
C6: (14.981,-68.081,5.572)
C5: (15.462,-68.016,4.259)
C4: (14.798,-67.159,3.402)
P: (18.247,-68.683,-2.228)
C4': (14.986,-66.680,-1.275)
C2': (16.122,-65.570,0.483)
C2: (13.390,-66.528,4.949)
N1: (13.921,-67.312,5.904)
N3: (13.745,-66.373,3.670)
N6: (15.505,-68.857,6.503)
N7: (16.497,-68.651,3.610)
N9: (15.426,-67.252,2.204)
O5': (17.144,-67.782,-1.515)
O3': (14.547,-64.352,-0.858)
OP2: (19.445,-68.801,-1.356)
C3': (15.589,-65.322,-0.922)
C1': (15.022,-66.454,1.047)
C5': (15.863,-67.594,-2.102)
O4': (14.671,-67.320,-0.010)
C8: (16.439,-68.160,2.387)
O2': (16.323,-64.402,1.266)
C6: (14.981,-68.081,5.572)
C5: (15.462,-68.016,4.259)
C4: (14.798,-67.159,3.402)
P: (18.247,-68.683,-2.228)
C4': (14.986,-66.680,-1.275)
C2': (16.122,-65.570,0.483)
C2: (13.390,-66.528,4.949)
N1: (13.921,-67.312,5.904)
N3: (13.745,-66.373,3.670)
N6: (15.505,-68.857,6.503)
N7: (16.497,-68.651,3.610)
N9: (15.426,-67.252,2.204)
O5': (17.144,-67.782,-1.515)
O3': (14.547,-64.352,-0.858)
Image (generated by PyMOL):