Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3P59:A10:A11
Extra
PDB:
ATOM 1 O3' C A 9 -8.647 -35.065 3.590 1.00 34.12 O
ATOM 2 P U A 10 -10.018 -35.810 3.925 1.00 54.54 P
ATOM 3 OP1 U A 10 -11.086 -35.138 3.136 1.00 55.25 O
ATOM 4 OP2 U A 10 -10.144 -35.847 5.402 1.00 48.99 O
ATOM 5 O5' U A 10 -9.748 -37.273 3.354 1.00 43.17 O
ATOM 6 C5' U A 10 -10.731 -38.288 3.452 1.00 46.78 C
ATOM 7 C4' U A 10 -10.976 -38.940 2.123 1.00 47.27 C
ATOM 8 O4' U A 10 -11.393 -37.938 1.151 1.00 44.23 O
ATOM 9 C3' U A 10 -9.775 -39.616 1.476 1.00 50.15 C
ATOM 10 O3' U A 10 -9.515 -40.924 1.995 1.00 51.86 O
ATOM 11 C2' U A 10 -10.168 -39.621 0.004 1.00 47.68 C
ATOM 12 O2' U A 10 -11.075 -40.678 -0.257 1.00 50.00 O
ATOM 13 C1' U A 10 -10.924 -38.292 -0.128 1.00 39.50 C
ATOM 14 N1 U A 10 -10.055 -37.202 -0.638 1.00 33.23 N
ATOM 15 C2 U A 10 -9.553 -37.322 -1.929 1.00 32.81 C
ATOM 16 O2 U A 10 -9.792 -38.301 -2.599 1.00 29.39 O
ATOM 17 N3 U A 10 -8.743 -36.293 -2.397 1.00 29.48 N
ATOM 18 C4 U A 10 -8.382 -35.164 -1.694 1.00 27.67 C
ATOM 19 O4 U A 10 -7.642 -34.324 -2.212 1.00 31.40 O
ATOM 20 C5 U A 10 -8.945 -35.100 -0.371 1.00 27.08 C
ATOM 21 C6 U A 10 -9.740 -36.084 0.099 1.00 27.48 C
ATOM 22 P A A 11 -8.212 -41.213 2.908 1.00 58.71 P
ATOM 23 OP1 A A 11 -8.168 -42.679 3.166 1.00 58.30 O
ATOM 24 OP2 A A 11 -8.279 -40.296 4.063 1.00 59.23 O
ATOM 25 O5' A A 11 -7.012 -40.799 1.945 1.00 62.76 O
TER
ATOM 1 O3' U B 10 -9.515 -40.924 1.995 1.00 51.86 O
ATOM 2 P A B 11 -8.212 -41.213 2.908 1.00 58.71 P
ATOM 3 OP1 A B 11 -8.168 -42.679 3.166 1.00 58.30 O
ATOM 4 OP2 A B 11 -8.279 -40.296 4.063 1.00 59.23 O
ATOM 5 O5' A B 11 -7.012 -40.799 1.945 1.00 62.76 O
ATOM 6 C5' A B 11 -6.727 -41.564 0.785 1.00 53.83 C
ATOM 7 C4' A B 11 -6.066 -40.742 -0.295 1.00 41.12 C
ATOM 8 O4' A B 11 -6.685 -39.441 -0.405 1.00 34.40 O
ATOM 9 C3' A B 11 -4.610 -40.407 -0.095 1.00 37.21 C
ATOM 10 O3' A B 11 -3.763 -41.505 -0.327 1.00 36.57 O
ATOM 11 C2' A B 11 -4.409 -39.262 -1.080 1.00 37.54 C
ATOM 12 O2' A B 11 -4.269 -39.757 -2.407 1.00 38.04 O
ATOM 13 C1' A B 11 -5.753 -38.534 -0.973 1.00 30.69 C
ATOM 14 N9 A B 11 -5.675 -37.332 -0.123 1.00 28.24 N
ATOM 15 C8 A B 11 -6.191 -37.190 1.136 1.00 30.86 C
ATOM 16 N7 A B 11 -5.999 -36.003 1.663 1.00 30.52 N
ATOM 17 C5 A B 11 -5.301 -35.315 0.687 1.00 28.03 C
ATOM 18 C6 A B 11 -4.812 -33.999 0.640 1.00 34.89 C
ATOM 19 N6 A B 11 -4.951 -33.145 1.650 1.00 38.94 N
ATOM 20 N1 A B 11 -4.174 -33.585 -0.485 1.00 33.28 N
ATOM 21 C2 A B 11 -4.042 -34.468 -1.491 1.00 32.53 C
ATOM 22 N3 A B 11 -4.470 -35.731 -1.564 1.00 28.98 N
ATOM 23 C4 A B 11 -5.099 -36.109 -0.428 1.00 29.78 C
ATOM 24 P C B 12 -2.653 -41.888 0.749 1.00 45.72 P
ATOM 25 OP1 C B 12 -2.254 -43.298 0.486 1.00 50.85 O
ATOM 26 OP2 C B 12 -3.200 -41.535 2.086 1.00 49.10 O
ATOM 27 O5' C B 12 -1.457 -40.905 0.368 1.00 44.41 O
TER
ATOM 2 P U A 10 -10.018 -35.810 3.925 1.00 54.54 P
ATOM 3 OP1 U A 10 -11.086 -35.138 3.136 1.00 55.25 O
ATOM 4 OP2 U A 10 -10.144 -35.847 5.402 1.00 48.99 O
ATOM 5 O5' U A 10 -9.748 -37.273 3.354 1.00 43.17 O
ATOM 6 C5' U A 10 -10.731 -38.288 3.452 1.00 46.78 C
ATOM 7 C4' U A 10 -10.976 -38.940 2.123 1.00 47.27 C
ATOM 8 O4' U A 10 -11.393 -37.938 1.151 1.00 44.23 O
ATOM 9 C3' U A 10 -9.775 -39.616 1.476 1.00 50.15 C
ATOM 10 O3' U A 10 -9.515 -40.924 1.995 1.00 51.86 O
ATOM 11 C2' U A 10 -10.168 -39.621 0.004 1.00 47.68 C
ATOM 12 O2' U A 10 -11.075 -40.678 -0.257 1.00 50.00 O
ATOM 13 C1' U A 10 -10.924 -38.292 -0.128 1.00 39.50 C
ATOM 14 N1 U A 10 -10.055 -37.202 -0.638 1.00 33.23 N
ATOM 15 C2 U A 10 -9.553 -37.322 -1.929 1.00 32.81 C
ATOM 16 O2 U A 10 -9.792 -38.301 -2.599 1.00 29.39 O
ATOM 17 N3 U A 10 -8.743 -36.293 -2.397 1.00 29.48 N
ATOM 18 C4 U A 10 -8.382 -35.164 -1.694 1.00 27.67 C
ATOM 19 O4 U A 10 -7.642 -34.324 -2.212 1.00 31.40 O
ATOM 20 C5 U A 10 -8.945 -35.100 -0.371 1.00 27.08 C
ATOM 21 C6 U A 10 -9.740 -36.084 0.099 1.00 27.48 C
ATOM 22 P A A 11 -8.212 -41.213 2.908 1.00 58.71 P
ATOM 23 OP1 A A 11 -8.168 -42.679 3.166 1.00 58.30 O
ATOM 24 OP2 A A 11 -8.279 -40.296 4.063 1.00 59.23 O
ATOM 25 O5' A A 11 -7.012 -40.799 1.945 1.00 62.76 O
TER
ATOM 1 O3' U B 10 -9.515 -40.924 1.995 1.00 51.86 O
ATOM 2 P A B 11 -8.212 -41.213 2.908 1.00 58.71 P
ATOM 3 OP1 A B 11 -8.168 -42.679 3.166 1.00 58.30 O
ATOM 4 OP2 A B 11 -8.279 -40.296 4.063 1.00 59.23 O
ATOM 5 O5' A B 11 -7.012 -40.799 1.945 1.00 62.76 O
ATOM 6 C5' A B 11 -6.727 -41.564 0.785 1.00 53.83 C
ATOM 7 C4' A B 11 -6.066 -40.742 -0.295 1.00 41.12 C
ATOM 8 O4' A B 11 -6.685 -39.441 -0.405 1.00 34.40 O
ATOM 9 C3' A B 11 -4.610 -40.407 -0.095 1.00 37.21 C
ATOM 10 O3' A B 11 -3.763 -41.505 -0.327 1.00 36.57 O
ATOM 11 C2' A B 11 -4.409 -39.262 -1.080 1.00 37.54 C
ATOM 12 O2' A B 11 -4.269 -39.757 -2.407 1.00 38.04 O
ATOM 13 C1' A B 11 -5.753 -38.534 -0.973 1.00 30.69 C
ATOM 14 N9 A B 11 -5.675 -37.332 -0.123 1.00 28.24 N
ATOM 15 C8 A B 11 -6.191 -37.190 1.136 1.00 30.86 C
ATOM 16 N7 A B 11 -5.999 -36.003 1.663 1.00 30.52 N
ATOM 17 C5 A B 11 -5.301 -35.315 0.687 1.00 28.03 C
ATOM 18 C6 A B 11 -4.812 -33.999 0.640 1.00 34.89 C
ATOM 19 N6 A B 11 -4.951 -33.145 1.650 1.00 38.94 N
ATOM 20 N1 A B 11 -4.174 -33.585 -0.485 1.00 33.28 N
ATOM 21 C2 A B 11 -4.042 -34.468 -1.491 1.00 32.53 C
ATOM 22 N3 A B 11 -4.470 -35.731 -1.564 1.00 28.98 N
ATOM 23 C4 A B 11 -5.099 -36.109 -0.428 1.00 29.78 C
ATOM 24 P C B 12 -2.653 -41.888 0.749 1.00 45.72 P
ATOM 25 OP1 C B 12 -2.254 -43.298 0.486 1.00 50.85 O
ATOM 26 OP2 C B 12 -3.200 -41.535 2.086 1.00 49.10 O
ATOM 27 O5' C B 12 -1.457 -40.905 0.368 1.00 44.41 O
TER
Atoms:
C4: (-8.382,-35.164,-1.694)
N3: (-8.743,-36.293,-2.397)
OP1: (-11.086,-35.138,3.136)
OP2: (-10.144,-35.847,5.402)
C2: (-9.553,-37.322,-1.929)
C1': (-10.924,-38.292,-0.128)
C3': (-9.775,-39.616,1.476)
O5': (-9.748,-37.273,3.354)
O4': (-11.393,-37.938,1.151)
C5': (-10.731,-38.288,3.452)
P: (-10.018,-35.810,3.925)
C4': (-10.976,-38.940,2.123)
C2': (-10.168,-39.621,0.004)
O2': (-11.075,-40.678,-0.257)
N1: (-10.055,-37.202,-0.638)
O4: (-7.642,-34.324,-2.212)
O2: (-9.792,-38.301,-2.599)
C6: (-9.740,-36.084,0.099)
C5: (-8.945,-35.100,-0.371)
O3': (-9.515,-40.924,1.995)
N3: (-8.743,-36.293,-2.397)
OP1: (-11.086,-35.138,3.136)
OP2: (-10.144,-35.847,5.402)
C2: (-9.553,-37.322,-1.929)
C1': (-10.924,-38.292,-0.128)
C3': (-9.775,-39.616,1.476)
O5': (-9.748,-37.273,3.354)
O4': (-11.393,-37.938,1.151)
C5': (-10.731,-38.288,3.452)
P: (-10.018,-35.810,3.925)
C4': (-10.976,-38.940,2.123)
C2': (-10.168,-39.621,0.004)
O2': (-11.075,-40.678,-0.257)
N1: (-10.055,-37.202,-0.638)
O4: (-7.642,-34.324,-2.212)
O2: (-9.792,-38.301,-2.599)
C6: (-9.740,-36.084,0.099)
C5: (-8.945,-35.100,-0.371)
O3': (-9.515,-40.924,1.995)
OP1: (-8.168,-42.679,3.166)
OP2: (-8.279,-40.296,4.063)
C3': (-4.610,-40.407,-0.095)
C1': (-5.753,-38.534,-0.973)
C5': (-6.727,-41.564,0.785)
O4': (-6.685,-39.441,-0.405)
C8: (-6.191,-37.190,1.136)
O2': (-4.269,-39.757,-2.407)
C6: (-4.812,-33.999,0.640)
C5: (-5.301,-35.315,0.687)
C4: (-5.099,-36.109,-0.428)
P: (-8.212,-41.213,2.908)
C4': (-6.066,-40.742,-0.295)
C2': (-4.409,-39.262,-1.080)
C2: (-4.042,-34.468,-1.491)
N1: (-4.174,-33.585,-0.485)
N3: (-4.470,-35.731,-1.564)
N6: (-4.951,-33.145,1.650)
N7: (-5.999,-36.003,1.663)
N9: (-5.675,-37.332,-0.123)
O5': (-7.012,-40.799,1.945)
O3': (-3.763,-41.505,-0.327)
OP2: (-8.279,-40.296,4.063)
C3': (-4.610,-40.407,-0.095)
C1': (-5.753,-38.534,-0.973)
C5': (-6.727,-41.564,0.785)
O4': (-6.685,-39.441,-0.405)
C8: (-6.191,-37.190,1.136)
O2': (-4.269,-39.757,-2.407)
C6: (-4.812,-33.999,0.640)
C5: (-5.301,-35.315,0.687)
C4: (-5.099,-36.109,-0.428)
P: (-8.212,-41.213,2.908)
C4': (-6.066,-40.742,-0.295)
C2': (-4.409,-39.262,-1.080)
C2: (-4.042,-34.468,-1.491)
N1: (-4.174,-33.585,-0.485)
N3: (-4.470,-35.731,-1.564)
N6: (-4.951,-33.145,1.650)
N7: (-5.999,-36.003,1.663)
N9: (-5.675,-37.332,-0.123)
O5': (-7.012,-40.799,1.945)
O3': (-3.763,-41.505,-0.327)
Image (generated by PyMOL):