Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11856:11857
Extra
PDB:
ATOM 1 O3' A A1855 0.610 44.888 77.821 1.00 52.80 O
ATOM 2 P U A1856 0.823 45.776 79.140 1.00 57.93 P
ATOM 3 OP1 U A1856 0.191 47.098 78.867 1.00 58.52 O
ATOM 4 OP2 U A1856 2.281 45.733 79.495 1.00 57.65 O
ATOM 5 O5' U A1856 -0.026 44.978 80.224 1.00 57.89 O
ATOM 6 C5' U A1856 -1.275 44.377 79.894 1.00 57.91 C
ATOM 7 C4' U A1856 -1.685 43.401 80.955 1.00 57.74 C
ATOM 8 O4' U A1856 -0.911 42.195 80.828 1.00 57.15 O
ATOM 9 C3' U A1856 -1.434 43.854 82.375 1.00 57.97 C
ATOM 10 O3' U A1856 -2.487 44.641 82.859 1.00 58.51 O
ATOM 11 C2' U A1856 -1.270 42.552 83.136 1.00 57.56 C
ATOM 12 O2' U A1856 -2.534 42.031 83.500 1.00 57.68 O
ATOM 13 C1' U A1856 -0.670 41.638 82.086 1.00 57.02 C
ATOM 14 N1 U A1856 0.782 41.440 82.236 1.00 56.68 N
ATOM 15 C2 U A1856 1.262 40.578 83.213 1.00 56.39 C
ATOM 16 O2 U A1856 0.558 40.024 84.043 1.00 56.43 O
ATOM 17 N3 U A1856 2.618 40.380 83.209 1.00 56.07 N
ATOM 18 C4 U A1856 3.520 40.931 82.322 1.00 56.00 C
ATOM 19 O4 U A1856 4.714 40.664 82.444 1.00 55.70 O
ATOM 20 C5 U A1856 2.948 41.770 81.325 1.00 56.29 C
ATOM 21 C6 U A1856 1.630 41.970 81.304 1.00 56.61 C
ATOM 22 P A A1857 -2.221 45.820 83.901 1.00 51.28 P
ATOM 23 OP1 A A1857 -3.567 46.443 84.186 1.00 51.83 O
ATOM 24 OP2 A A1857 -1.123 46.673 83.365 1.00 51.31 O
ATOM 25 O5' A A1857 -1.729 45.038 85.176 1.00 51.03 O
TER
ATOM 1 O3' U B1856 -2.487 44.641 82.859 1.00 58.51 O
ATOM 2 P A B1857 -2.221 45.820 83.901 1.00 51.28 P
ATOM 3 OP1 A B1857 -3.567 46.443 84.186 1.00 51.83 O
ATOM 4 OP2 A B1857 -1.123 46.673 83.365 1.00 51.31 O
ATOM 5 O5' A B1857 -1.729 45.038 85.176 1.00 51.03 O
ATOM 6 C5' A B1857 -2.663 44.381 86.019 1.00 51.09 C
ATOM 7 C4' A B1857 -1.961 43.599 87.081 1.00 50.79 C
ATOM 8 O4' A B1857 -0.763 43.011 86.507 1.00 50.27 O
ATOM 9 C3' A B1857 -1.487 44.403 88.263 1.00 51.12 C
ATOM 10 O3' A B1857 -1.394 43.540 89.365 1.00 50.95 O
ATOM 11 C2' A B1857 -0.085 44.800 87.854 1.00 50.93 C
ATOM 12 O2' A B1857 0.762 45.117 88.938 1.00 51.02 O
ATOM 13 C1' A B1857 0.385 43.546 87.119 1.00 50.30 C
ATOM 14 N9 A B1857 1.343 43.805 86.058 1.00 50.08 N
ATOM 15 C8 A B1857 1.201 44.704 85.049 1.00 50.31 C
ATOM 16 N7 A B1857 2.210 44.718 84.229 1.00 50.03 N
ATOM 17 C5 A B1857 3.063 43.748 84.728 1.00 49.58 C
ATOM 18 C6 A B1857 4.313 43.254 84.317 1.00 49.14 C
ATOM 19 N6 A B1857 4.956 43.682 83.242 1.00 49.06 N
ATOM 20 N1 A B1857 4.886 42.279 85.045 1.00 48.78 N
ATOM 21 C2 A B1857 4.269 41.818 86.126 1.00 48.86 C
ATOM 22 N3 A B1857 3.097 42.183 86.604 1.00 49.26 N
ATOM 23 C4 A B1857 2.531 43.159 85.855 1.00 49.61 C
ATOM 24 P G B1858 -2.397 43.705 90.570 1.00 47.70 P
ATOM 25 OP1 G B1858 -2.469 42.408 91.260 1.00 47.36 O
ATOM 26 OP2 G B1858 -3.623 44.298 90.019 1.00 48.09 O
ATOM 27 O5' G B1858 -1.685 44.760 91.493 1.00 48.06 O
TER
ATOM 2 P U A1856 0.823 45.776 79.140 1.00 57.93 P
ATOM 3 OP1 U A1856 0.191 47.098 78.867 1.00 58.52 O
ATOM 4 OP2 U A1856 2.281 45.733 79.495 1.00 57.65 O
ATOM 5 O5' U A1856 -0.026 44.978 80.224 1.00 57.89 O
ATOM 6 C5' U A1856 -1.275 44.377 79.894 1.00 57.91 C
ATOM 7 C4' U A1856 -1.685 43.401 80.955 1.00 57.74 C
ATOM 8 O4' U A1856 -0.911 42.195 80.828 1.00 57.15 O
ATOM 9 C3' U A1856 -1.434 43.854 82.375 1.00 57.97 C
ATOM 10 O3' U A1856 -2.487 44.641 82.859 1.00 58.51 O
ATOM 11 C2' U A1856 -1.270 42.552 83.136 1.00 57.56 C
ATOM 12 O2' U A1856 -2.534 42.031 83.500 1.00 57.68 O
ATOM 13 C1' U A1856 -0.670 41.638 82.086 1.00 57.02 C
ATOM 14 N1 U A1856 0.782 41.440 82.236 1.00 56.68 N
ATOM 15 C2 U A1856 1.262 40.578 83.213 1.00 56.39 C
ATOM 16 O2 U A1856 0.558 40.024 84.043 1.00 56.43 O
ATOM 17 N3 U A1856 2.618 40.380 83.209 1.00 56.07 N
ATOM 18 C4 U A1856 3.520 40.931 82.322 1.00 56.00 C
ATOM 19 O4 U A1856 4.714 40.664 82.444 1.00 55.70 O
ATOM 20 C5 U A1856 2.948 41.770 81.325 1.00 56.29 C
ATOM 21 C6 U A1856 1.630 41.970 81.304 1.00 56.61 C
ATOM 22 P A A1857 -2.221 45.820 83.901 1.00 51.28 P
ATOM 23 OP1 A A1857 -3.567 46.443 84.186 1.00 51.83 O
ATOM 24 OP2 A A1857 -1.123 46.673 83.365 1.00 51.31 O
ATOM 25 O5' A A1857 -1.729 45.038 85.176 1.00 51.03 O
TER
ATOM 1 O3' U B1856 -2.487 44.641 82.859 1.00 58.51 O
ATOM 2 P A B1857 -2.221 45.820 83.901 1.00 51.28 P
ATOM 3 OP1 A B1857 -3.567 46.443 84.186 1.00 51.83 O
ATOM 4 OP2 A B1857 -1.123 46.673 83.365 1.00 51.31 O
ATOM 5 O5' A B1857 -1.729 45.038 85.176 1.00 51.03 O
ATOM 6 C5' A B1857 -2.663 44.381 86.019 1.00 51.09 C
ATOM 7 C4' A B1857 -1.961 43.599 87.081 1.00 50.79 C
ATOM 8 O4' A B1857 -0.763 43.011 86.507 1.00 50.27 O
ATOM 9 C3' A B1857 -1.487 44.403 88.263 1.00 51.12 C
ATOM 10 O3' A B1857 -1.394 43.540 89.365 1.00 50.95 O
ATOM 11 C2' A B1857 -0.085 44.800 87.854 1.00 50.93 C
ATOM 12 O2' A B1857 0.762 45.117 88.938 1.00 51.02 O
ATOM 13 C1' A B1857 0.385 43.546 87.119 1.00 50.30 C
ATOM 14 N9 A B1857 1.343 43.805 86.058 1.00 50.08 N
ATOM 15 C8 A B1857 1.201 44.704 85.049 1.00 50.31 C
ATOM 16 N7 A B1857 2.210 44.718 84.229 1.00 50.03 N
ATOM 17 C5 A B1857 3.063 43.748 84.728 1.00 49.58 C
ATOM 18 C6 A B1857 4.313 43.254 84.317 1.00 49.14 C
ATOM 19 N6 A B1857 4.956 43.682 83.242 1.00 49.06 N
ATOM 20 N1 A B1857 4.886 42.279 85.045 1.00 48.78 N
ATOM 21 C2 A B1857 4.269 41.818 86.126 1.00 48.86 C
ATOM 22 N3 A B1857 3.097 42.183 86.604 1.00 49.26 N
ATOM 23 C4 A B1857 2.531 43.159 85.855 1.00 49.61 C
ATOM 24 P G B1858 -2.397 43.705 90.570 1.00 47.70 P
ATOM 25 OP1 G B1858 -2.469 42.408 91.260 1.00 47.36 O
ATOM 26 OP2 G B1858 -3.623 44.298 90.019 1.00 48.09 O
ATOM 27 O5' G B1858 -1.685 44.760 91.493 1.00 48.06 O
TER
Atoms:
C4: (3.520,40.931,82.322)
N3: (2.618,40.380,83.209)
OP1: (0.191,47.098,78.867)
OP2: (2.281,45.733,79.495)
C2: (1.262,40.578,83.213)
C1': (-0.670,41.638,82.086)
C3': (-1.434,43.854,82.375)
O5': (-0.026,44.978,80.224)
O4': (-0.911,42.195,80.828)
C5': (-1.275,44.377,79.894)
P: (0.823,45.776,79.140)
C4': (-1.685,43.401,80.955)
C2': (-1.270,42.552,83.136)
O2': (-2.534,42.031,83.500)
N1: (0.782,41.440,82.236)
O4: (4.714,40.664,82.444)
O2: (0.558,40.024,84.043)
C6: (1.630,41.970,81.304)
C5: (2.948,41.770,81.325)
O3': (-2.487,44.641,82.859)
N3: (2.618,40.380,83.209)
OP1: (0.191,47.098,78.867)
OP2: (2.281,45.733,79.495)
C2: (1.262,40.578,83.213)
C1': (-0.670,41.638,82.086)
C3': (-1.434,43.854,82.375)
O5': (-0.026,44.978,80.224)
O4': (-0.911,42.195,80.828)
C5': (-1.275,44.377,79.894)
P: (0.823,45.776,79.140)
C4': (-1.685,43.401,80.955)
C2': (-1.270,42.552,83.136)
O2': (-2.534,42.031,83.500)
N1: (0.782,41.440,82.236)
O4: (4.714,40.664,82.444)
O2: (0.558,40.024,84.043)
C6: (1.630,41.970,81.304)
C5: (2.948,41.770,81.325)
O3': (-2.487,44.641,82.859)
OP1: (-3.567,46.443,84.186)
OP2: (-1.123,46.673,83.365)
C3': (-1.487,44.403,88.263)
C1': (0.385,43.546,87.119)
C5': (-2.663,44.381,86.019)
O4': (-0.763,43.011,86.507)
C8: (1.201,44.704,85.049)
O2': (0.762,45.117,88.938)
C6: (4.313,43.254,84.317)
C5: (3.063,43.748,84.728)
C4: (2.531,43.159,85.855)
P: (-2.221,45.820,83.901)
C4': (-1.961,43.599,87.081)
C2': (-0.085,44.800,87.854)
C2: (4.269,41.818,86.126)
N1: (4.886,42.279,85.045)
N3: (3.097,42.183,86.604)
N6: (4.956,43.682,83.242)
N7: (2.210,44.718,84.229)
N9: (1.343,43.805,86.058)
O5': (-1.729,45.038,85.176)
O3': (-1.394,43.540,89.365)
OP2: (-1.123,46.673,83.365)
C3': (-1.487,44.403,88.263)
C1': (0.385,43.546,87.119)
C5': (-2.663,44.381,86.019)
O4': (-0.763,43.011,86.507)
C8: (1.201,44.704,85.049)
O2': (0.762,45.117,88.938)
C6: (4.313,43.254,84.317)
C5: (3.063,43.748,84.728)
C4: (2.531,43.159,85.855)
P: (-2.221,45.820,83.901)
C4': (-1.961,43.599,87.081)
C2': (-0.085,44.800,87.854)
C2: (4.269,41.818,86.126)
N1: (4.886,42.279,85.045)
N3: (3.097,42.183,86.604)
N6: (4.956,43.682,83.242)
N7: (2.210,44.718,84.229)
N9: (1.343,43.805,86.058)
O5': (-1.729,45.038,85.176)
O3': (-1.394,43.540,89.365)
Image (generated by PyMOL):