Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIY:A42:A41
Extra
PDB:
ATOM 1 O3' A A 41 -1.842 51.610 6.643 1.00 26.02 O
ATOM 2 P G A 42 -0.302 51.831 6.257 1.00 25.31 P
ATOM 3 OP1 G A 42 0.122 53.160 6.762 1.00 25.76 O
ATOM 4 OP2 G A 42 -0.170 51.525 4.812 1.00 25.55 O
ATOM 5 O5' G A 42 0.442 50.710 7.120 1.00 24.05 O
ATOM 6 C5' G A 42 0.429 50.777 8.550 1.00 23.93 C
ATOM 7 C4' G A 42 0.674 49.423 9.203 1.00 23.96 C
ATOM 8 O4' G A 42 -0.457 48.544 8.956 1.00 24.12 O
ATOM 9 C3' G A 42 1.907 48.665 8.718 1.00 24.07 C
ATOM 10 O3' G A 42 2.503 47.914 9.777 1.00 24.92 O
ATOM 11 C2' G A 42 1.320 47.760 7.641 1.00 23.66 C
ATOM 12 O2' G A 42 2.072 46.585 7.432 1.00 24.39 O
ATOM 13 C1' G A 42 -0.067 47.425 8.183 1.00 23.43 C
ATOM 14 N9 G A 42 -0.999 47.275 7.076 1.00 23.18 N
ATOM 15 C8 G A 42 -1.800 48.248 6.530 1.00 23.34 C
ATOM 16 N7 G A 42 -2.514 47.835 5.521 1.00 23.40 N
ATOM 17 C5 G A 42 -2.158 46.500 5.383 1.00 23.52 C
ATOM 18 C6 G A 42 -2.602 45.525 4.451 1.00 23.64 C
ATOM 19 O6 G A 42 -3.431 45.663 3.535 1.00 23.46 O
ATOM 20 N1 G A 42 -1.984 44.288 4.656 1.00 23.49 N
ATOM 21 C2 G A 42 -1.054 44.032 5.640 1.00 23.86 C
ATOM 22 N2 G A 42 -0.560 42.789 5.699 1.00 23.56 N
ATOM 23 N3 G A 42 -0.631 44.936 6.515 1.00 24.23 N
ATOM 24 C4 G A 42 -1.222 46.144 6.330 1.00 23.48 C
ATOM 25 P G A 43 4.086 47.928 10.015 1.00 25.49 P
ATOM 26 OP1 G A 43 4.457 46.677 10.709 1.00 24.97 O
ATOM 27 OP2 G A 43 4.433 49.242 10.599 1.00 25.53 O
ATOM 28 O5' G A 43 4.684 47.848 8.531 1.00 26.39 O
TER
ATOM 1 O3' C B 40 -4.180 55.085 1.761 1.00 36.52 O
ATOM 2 P A B 41 -4.377 53.697 2.527 1.00 33.86 P
ATOM 3 OP1 A B 41 -3.181 52.865 2.266 1.00 34.08 O
ATOM 4 OP2 A B 41 -5.723 53.176 2.192 1.00 33.66 O
ATOM 5 O5' A B 41 -4.374 54.158 4.059 1.00 32.07 O
ATOM 6 C5' A B 41 -3.150 54.422 4.739 1.00 29.31 C
ATOM 7 C4' A B 41 -3.072 53.611 6.022 1.00 27.20 C
ATOM 8 O4' A B 41 -4.293 53.788 6.789 1.00 26.42 O
ATOM 9 C3' A B 41 -2.906 52.105 5.828 1.00 26.21 C
ATOM 10 O3' A B 41 -1.842 51.610 6.643 1.00 26.02 O
ATOM 11 C2' A B 41 -4.255 51.549 6.276 1.00 25.80 C
ATOM 12 O2' A B 41 -4.169 50.260 6.844 1.00 26.50 O
ATOM 13 C1' A B 41 -4.646 52.549 7.354 1.00 25.21 C
ATOM 14 N9 A B 41 -6.066 52.502 7.717 1.00 24.49 N
ATOM 15 C8 A B 41 -7.139 52.473 6.866 1.00 24.16 C
ATOM 16 N7 A B 41 -8.303 52.420 7.470 1.00 23.78 N
ATOM 17 C5 A B 41 -7.980 52.412 8.816 1.00 23.56 C
ATOM 18 C6 A B 41 -8.769 52.362 9.986 1.00 23.31 C
ATOM 19 N6 A B 41 -10.103 52.312 9.968 1.00 24.08 N
ATOM 20 N1 A B 41 -8.140 52.373 11.182 1.00 22.91 N
ATOM 21 C2 A B 41 -6.803 52.426 11.199 1.00 23.05 C
ATOM 22 N3 A B 41 -5.953 52.474 10.168 1.00 23.49 N
ATOM 23 C4 A B 41 -6.606 52.464 8.989 1.00 23.83 C
ATOM 24 P G B 42 -0.302 51.831 6.257 1.00 25.31 P
ATOM 25 OP1 G B 42 0.122 53.160 6.762 1.00 25.76 O
ATOM 26 OP2 G B 42 -0.170 51.525 4.812 1.00 25.55 O
ATOM 27 O5' G B 42 0.442 50.710 7.120 1.00 24.05 O
TER
ATOM 2 P G A 42 -0.302 51.831 6.257 1.00 25.31 P
ATOM 3 OP1 G A 42 0.122 53.160 6.762 1.00 25.76 O
ATOM 4 OP2 G A 42 -0.170 51.525 4.812 1.00 25.55 O
ATOM 5 O5' G A 42 0.442 50.710 7.120 1.00 24.05 O
ATOM 6 C5' G A 42 0.429 50.777 8.550 1.00 23.93 C
ATOM 7 C4' G A 42 0.674 49.423 9.203 1.00 23.96 C
ATOM 8 O4' G A 42 -0.457 48.544 8.956 1.00 24.12 O
ATOM 9 C3' G A 42 1.907 48.665 8.718 1.00 24.07 C
ATOM 10 O3' G A 42 2.503 47.914 9.777 1.00 24.92 O
ATOM 11 C2' G A 42 1.320 47.760 7.641 1.00 23.66 C
ATOM 12 O2' G A 42 2.072 46.585 7.432 1.00 24.39 O
ATOM 13 C1' G A 42 -0.067 47.425 8.183 1.00 23.43 C
ATOM 14 N9 G A 42 -0.999 47.275 7.076 1.00 23.18 N
ATOM 15 C8 G A 42 -1.800 48.248 6.530 1.00 23.34 C
ATOM 16 N7 G A 42 -2.514 47.835 5.521 1.00 23.40 N
ATOM 17 C5 G A 42 -2.158 46.500 5.383 1.00 23.52 C
ATOM 18 C6 G A 42 -2.602 45.525 4.451 1.00 23.64 C
ATOM 19 O6 G A 42 -3.431 45.663 3.535 1.00 23.46 O
ATOM 20 N1 G A 42 -1.984 44.288 4.656 1.00 23.49 N
ATOM 21 C2 G A 42 -1.054 44.032 5.640 1.00 23.86 C
ATOM 22 N2 G A 42 -0.560 42.789 5.699 1.00 23.56 N
ATOM 23 N3 G A 42 -0.631 44.936 6.515 1.00 24.23 N
ATOM 24 C4 G A 42 -1.222 46.144 6.330 1.00 23.48 C
ATOM 25 P G A 43 4.086 47.928 10.015 1.00 25.49 P
ATOM 26 OP1 G A 43 4.457 46.677 10.709 1.00 24.97 O
ATOM 27 OP2 G A 43 4.433 49.242 10.599 1.00 25.53 O
ATOM 28 O5' G A 43 4.684 47.848 8.531 1.00 26.39 O
TER
ATOM 1 O3' C B 40 -4.180 55.085 1.761 1.00 36.52 O
ATOM 2 P A B 41 -4.377 53.697 2.527 1.00 33.86 P
ATOM 3 OP1 A B 41 -3.181 52.865 2.266 1.00 34.08 O
ATOM 4 OP2 A B 41 -5.723 53.176 2.192 1.00 33.66 O
ATOM 5 O5' A B 41 -4.374 54.158 4.059 1.00 32.07 O
ATOM 6 C5' A B 41 -3.150 54.422 4.739 1.00 29.31 C
ATOM 7 C4' A B 41 -3.072 53.611 6.022 1.00 27.20 C
ATOM 8 O4' A B 41 -4.293 53.788 6.789 1.00 26.42 O
ATOM 9 C3' A B 41 -2.906 52.105 5.828 1.00 26.21 C
ATOM 10 O3' A B 41 -1.842 51.610 6.643 1.00 26.02 O
ATOM 11 C2' A B 41 -4.255 51.549 6.276 1.00 25.80 C
ATOM 12 O2' A B 41 -4.169 50.260 6.844 1.00 26.50 O
ATOM 13 C1' A B 41 -4.646 52.549 7.354 1.00 25.21 C
ATOM 14 N9 A B 41 -6.066 52.502 7.717 1.00 24.49 N
ATOM 15 C8 A B 41 -7.139 52.473 6.866 1.00 24.16 C
ATOM 16 N7 A B 41 -8.303 52.420 7.470 1.00 23.78 N
ATOM 17 C5 A B 41 -7.980 52.412 8.816 1.00 23.56 C
ATOM 18 C6 A B 41 -8.769 52.362 9.986 1.00 23.31 C
ATOM 19 N6 A B 41 -10.103 52.312 9.968 1.00 24.08 N
ATOM 20 N1 A B 41 -8.140 52.373 11.182 1.00 22.91 N
ATOM 21 C2 A B 41 -6.803 52.426 11.199 1.00 23.05 C
ATOM 22 N3 A B 41 -5.953 52.474 10.168 1.00 23.49 N
ATOM 23 C4 A B 41 -6.606 52.464 8.989 1.00 23.83 C
ATOM 24 P G B 42 -0.302 51.831 6.257 1.00 25.31 P
ATOM 25 OP1 G B 42 0.122 53.160 6.762 1.00 25.76 O
ATOM 26 OP2 G B 42 -0.170 51.525 4.812 1.00 25.55 O
ATOM 27 O5' G B 42 0.442 50.710 7.120 1.00 24.05 O
TER
Atoms:
OP1: (0.122,53.160,6.762)
OP2: (-0.170,51.525,4.812)
C3': (1.907,48.665,8.718)
C1': (-0.067,47.425,8.183)
C5': (0.429,50.777,8.550)
O6: (-3.431,45.663,3.535)
O4': (-0.457,48.544,8.956)
C8: (-1.800,48.248,6.530)
C2: (-1.054,44.032,5.640)
C6: (-2.602,45.525,4.451)
C5: (-2.158,46.500,5.383)
C4: (-1.222,46.144,6.330)
P: (-0.302,51.831,6.257)
C4': (0.674,49.423,9.203)
C2': (1.320,47.760,7.641)
O2': (2.072,46.585,7.432)
N1: (-1.984,44.288,4.656)
N2: (-0.560,42.789,5.699)
N3: (-0.631,44.936,6.515)
N7: (-2.514,47.835,5.521)
N9: (-0.999,47.275,7.076)
O5': (0.442,50.710,7.120)
O3': (2.503,47.914,9.777)
OP2: (-0.170,51.525,4.812)
C3': (1.907,48.665,8.718)
C1': (-0.067,47.425,8.183)
C5': (0.429,50.777,8.550)
O6: (-3.431,45.663,3.535)
O4': (-0.457,48.544,8.956)
C8: (-1.800,48.248,6.530)
C2: (-1.054,44.032,5.640)
C6: (-2.602,45.525,4.451)
C5: (-2.158,46.500,5.383)
C4: (-1.222,46.144,6.330)
P: (-0.302,51.831,6.257)
C4': (0.674,49.423,9.203)
C2': (1.320,47.760,7.641)
O2': (2.072,46.585,7.432)
N1: (-1.984,44.288,4.656)
N2: (-0.560,42.789,5.699)
N3: (-0.631,44.936,6.515)
N7: (-2.514,47.835,5.521)
N9: (-0.999,47.275,7.076)
O5': (0.442,50.710,7.120)
O3': (2.503,47.914,9.777)
OP1: (-3.181,52.865,2.266)
OP2: (-5.723,53.176,2.192)
C3': (-2.906,52.105,5.828)
C1': (-4.646,52.549,7.354)
C5': (-3.150,54.422,4.739)
O4': (-4.293,53.788,6.789)
C8: (-7.139,52.473,6.866)
O2': (-4.169,50.260,6.844)
C6: (-8.769,52.362,9.986)
C5: (-7.980,52.412,8.816)
C4: (-6.606,52.464,8.989)
P: (-4.377,53.697,2.527)
C4': (-3.072,53.611,6.022)
C2': (-4.255,51.549,6.276)
C2: (-6.803,52.426,11.199)
N1: (-8.140,52.373,11.182)
N3: (-5.953,52.474,10.168)
N6: (-10.103,52.312,9.968)
N7: (-8.303,52.420,7.470)
N9: (-6.066,52.502,7.717)
O5': (-4.374,54.158,4.059)
O3': (-1.842,51.610,6.643)
OP2: (-5.723,53.176,2.192)
C3': (-2.906,52.105,5.828)
C1': (-4.646,52.549,7.354)
C5': (-3.150,54.422,4.739)
O4': (-4.293,53.788,6.789)
C8: (-7.139,52.473,6.866)
O2': (-4.169,50.260,6.844)
C6: (-8.769,52.362,9.986)
C5: (-7.980,52.412,8.816)
C4: (-6.606,52.464,8.989)
P: (-4.377,53.697,2.527)
C4': (-3.072,53.611,6.022)
C2': (-4.255,51.549,6.276)
C2: (-6.803,52.426,11.199)
N1: (-8.140,52.373,11.182)
N3: (-5.953,52.474,10.168)
N6: (-10.103,52.312,9.968)
N7: (-8.303,52.420,7.470)
N9: (-6.066,52.502,7.717)
O5': (-4.374,54.158,4.059)
O3': (-1.842,51.610,6.643)
Image (generated by PyMOL):