ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ESJ:A16:A15

Extra

PDB:
ATOM 1 O3' A A 15 14.814 -13.193 22.467 1.00 42.81 O
ATOM 2 P G A 16 15.401 -14.658 22.084 1.00 43.45 P
ATOM 3 OP1 G A 16 15.377 -15.619 23.223 1.00 43.50 O
ATOM 4 OP2 G A 16 16.685 -14.417 21.351 1.00 43.68 O
ATOM 5 O5' G A 16 14.345 -15.183 21.018 1.00 41.89 O
ATOM 6 C5' G A 16 12.981 -15.343 21.363 1.00 39.56 C
ATOM 7 C4' G A 16 12.132 -15.163 20.137 1.00 37.91 C
ATOM 8 O4' G A 16 11.773 -13.767 19.941 1.00 36.72 O
ATOM 9 C3' G A 16 12.816 -15.560 18.839 1.00 37.00 C
ATOM 10 O3' G A 16 12.736 -16.971 18.673 1.00 38.24 O
ATOM 11 C2' G A 16 11.957 -14.822 17.826 1.00 35.98 C
ATOM 12 O2' G A 16 10.716 -15.470 17.647 1.00 35.66 O
ATOM 13 C1' G A 16 11.734 -13.487 18.544 1.00 35.05 C
ATOM 14 N9 G A 16 12.811 -12.550 18.231 1.00 31.15 N
ATOM 15 C8 G A 16 13.760 -12.039 19.094 1.00 31.32 C
ATOM 16 N7 G A 16 14.633 -11.271 18.498 1.00 29.77 N
ATOM 17 C5 G A 16 14.230 -11.261 17.171 1.00 28.97 C
ATOM 18 C6 G A 16 14.795 -10.619 16.056 1.00 29.26 C
ATOM 19 O6 G A 16 15.816 -9.913 16.000 1.00 30.05 O
ATOM 20 N1 G A 16 14.063 -10.872 14.900 1.00 29.36 N
ATOM 21 C2 G A 16 12.940 -11.654 14.824 1.00 28.24 C
ATOM 22 N2 G A 16 12.387 -11.766 13.615 1.00 26.92 N
ATOM 23 N3 G A 16 12.406 -12.275 15.859 1.00 28.50 N
ATOM 24 C4 G A 16 13.097 -12.035 16.994 1.00 29.97 C
ATOM 25 P U A 17 13.849 -17.755 17.812 1.00 38.28 P
ATOM 26 OP1 U A 17 13.510 -19.199 17.985 1.00 39.13 O
ATOM 27 OP2 U A 17 15.212 -17.274 18.160 1.00 36.65 O
ATOM 28 O5' U A 17 13.536 -17.374 16.292 1.00 36.38 O
TER

ATOM 1 O3' A B 14 18.529 -8.486 24.375 1.00 35.93 O
ATOM 2 P A B 15 17.351 -8.940 23.367 1.00 34.57 P
ATOM 3 OP1 A B 15 17.945 -9.165 22.023 1.00 33.65 O
ATOM 4 OP2 A B 15 16.241 -8.046 23.612 1.00 35.76 O
ATOM 5 O5' A B 15 16.806 -10.305 23.967 1.00 37.48 O
ATOM 6 C5' A B 15 17.369 -11.561 23.603 1.00 39.60 C
ATOM 7 C4' A B 15 16.522 -12.668 24.174 1.00 40.57 C
ATOM 8 O4' A B 15 16.482 -12.513 25.620 1.00 39.94 O
ATOM 9 C3' A B 15 15.054 -12.619 23.757 1.00 41.53 C
ATOM 10 O3' A B 15 14.814 -13.193 22.467 1.00 42.81 O
ATOM 11 C2' A B 15 14.333 -13.293 24.914 1.00 41.24 C
ATOM 12 O2' A B 15 14.312 -14.709 24.851 1.00 43.39 O
ATOM 13 C1' A B 15 15.189 -12.844 26.100 1.00 39.18 C
ATOM 14 N9 A B 15 14.641 -11.679 26.776 1.00 37.92 N
ATOM 15 C8 A B 15 14.730 -10.359 26.412 1.00 35.99 C
ATOM 16 N7 A B 15 14.160 -9.540 27.263 1.00 35.24 N
ATOM 17 C5 A B 15 13.653 -10.377 28.248 1.00 35.61 C
ATOM 18 C6 A B 15 12.940 -10.126 29.425 1.00 35.45 C
ATOM 19 N6 A B 15 12.625 -8.899 29.848 1.00 35.49 N
ATOM 20 N1 A B 15 12.561 -11.191 30.173 1.00 34.68 N
ATOM 21 C2 A B 15 12.893 -12.415 29.756 1.00 34.12 C
ATOM 22 N3 A B 15 13.572 -12.779 28.672 1.00 34.33 N
ATOM 23 C4 A B 15 13.927 -11.699 27.952 1.00 37.02 C
ATOM 24 P G B 16 15.401 -14.658 22.084 1.00 43.45 P
ATOM 25 OP1 G B 16 15.377 -15.619 23.223 1.00 43.50 O
ATOM 26 OP2 G B 16 16.685 -14.417 21.351 1.00 43.68 O
ATOM 27 O5' G B 16 14.345 -15.183 21.018 1.00 41.89 O
TER

Atoms:
OP1: (15.377,-15.619,23.223)
OP2: (16.685,-14.417,21.351)
C3': (12.816,-15.560,18.839)
C1': (11.734,-13.487,18.544)
C5': (12.981,-15.343,21.363)
O6: (15.816,-9.913,16.000)
O4': (11.773,-13.767,19.941)
C8: (13.760,-12.039,19.094)
C2: (12.940,-11.654,14.824)
C6: (14.795,-10.619,16.056)
C5: (14.230,-11.261,17.171)
C4: (13.097,-12.035,16.994)
P: (15.401,-14.658,22.084)
C4': (12.132,-15.163,20.137)
C2': (11.957,-14.822,17.826)
O2': (10.716,-15.470,17.647)
N1: (14.063,-10.872,14.900)
N2: (12.387,-11.766,13.615)
N3: (12.406,-12.275,15.859)
N7: (14.633,-11.271,18.498)
N9: (12.811,-12.550,18.231)
O5': (14.345,-15.183,21.018)
O3': (12.736,-16.971,18.673)
OP1: (17.945,-9.165,22.023)
OP2: (16.241,-8.046,23.612)
C3': (15.054,-12.619,23.757)
C1': (15.189,-12.844,26.100)
C5': (17.369,-11.561,23.603)
O4': (16.482,-12.513,25.620)
C8: (14.730,-10.359,26.412)
O2': (14.312,-14.709,24.851)
C6: (12.940,-10.126,29.425)
C5: (13.653,-10.377,28.248)
C4: (13.927,-11.699,27.952)
P: (17.351,-8.940,23.367)
C4': (16.522,-12.668,24.174)
C2': (14.333,-13.293,24.914)
C2: (12.893,-12.415,29.756)
N1: (12.561,-11.191,30.173)
N3: (13.572,-12.779,28.672)
N6: (12.625,-8.899,29.848)
N7: (14.160,-9.540,27.263)
N9: (14.641,-11.679,26.776)
O5': (16.806,-10.305,23.967)
O3': (14.814,-13.193,22.467)
Image (generated by PyMOL):
PyMOL image
show in jmol